Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
333 (305) |
PWM (Da): |
35478.69 (32737.2) |
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PI (pH): |
5.31 (5.31) |
Peptide Signal: |
cut: 29 range:29-333 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAGSSTPSSL TAVTLLAALL LFLNPSNAQL TANFYAKTCP SVSSIVQTVI QEALQSDPRI TASLLRLHFH DCFVDGCDGS LLLDNSPTIK SEKDAAPNFK SARGFDVVDK IKAAIESACP
GTVSCADILA LAAQASVSLS EGPYWTVLLG RRDSLTANQA GANTSIPSPF DSYNNLVSKF SAVGLDITDL ATLSGAHTFG RAQCKSFNPR LYNFTANGGP DPTINPWYLT NLRKLCPQNG
DSSVLADLDP TTPNLFDNHY YSNLRKNEGL LLSDQELSST SGAATISIVN SFSFDQSAFF ESFARSIVNM GNISPLTGSN GEIRFNCRKV NWS
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns). Short sequence are missing due to "n".
scaffold_1_2253 (22978..24911).
Partenal (g21790.t1): incorrect prediction (splicing error) |
Promoter►
Send to BLAST
Send to cis Analysis
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCGGTT CTTCTACTCC TTCCTCGCTG ACGGCGGTGA CCCTTCTCGC CGCATTGTTG TTGTTCCTCA ATCCGTCGAA CGCTCAACTG ACTGCCAATT TTTATGCGAA GACATGCCCG
AGCGTGTCCA GTATTGTCCA AACCGTGATC CAGGAGGCCC TTCAATCTGA CCCACGCATC ACTGCCAGCC TCCTCCGTCT CCATTTCCAC GATTGTTTCG TCGACGTGAG TCCCTAAGCT
AGATCAATTC CCATTAACAA TGGTGCTCTC AATCTGATTA CCAAGTAGCT AGTCACGCAA CCTAATGTTT AAGCCTGACA TGTGTGTTAA AAGGGGTGTG ATGGATCGCT GCTGCTGGAC
AATAGCCCAA CCATAAAGAG CGAGAAAGAT GCAGCTCCGA ATTTTAAGTC CGCAAGAGGG TTTGATGTCG TGGACAAGAT CAAAGCGGCT ATCGAGAGTG CTTGTCCAGG GACCGTGTCT
TGCGCCGACA TTCTTGCCCT TGCTGCTCAA GCTTCCGTCT CTTTGGTATA TGTAGTTATA GTCAAAGAAA CATAAACATA AATCTAAAGT ATATTCAGGG TTCATTATTA TAACTCACCC
TACTCAAATC ATTATTGTAT TTCTCTTGAT TATCACTCTT ACCAATTTGC AGTCAGAAGG TCCATATTGG ACAGTGCTCT TGGGGAGGAG GGACAGCTTG ACCGCGAACC AAGCCGGAGC
GAACACATCG ATACCCTCCC CTTTTGATAG CTATAACAAC CTCGTTTCCA AATTCTCTGC TGTTGGCTTG GACATCACCG ACCTTGCTAC ACTTTCCGGT AAAAAAGAAC AATTGGACTT
GCATTTTAAT ACGAAACGTG CAACTGTAGA TATTGATGCA CAAAAAAGAT TTATAGAGTG AGATGCTGGA TTTTTGTCAC ATAATTTATC GGCACAAACA TCTCTTCACT TTTGTTTAAC
ACATTCTAAC TTCCTAATAT GATCATAGTC TAAGATTAAT TGTAATCTAT TGACATGCCT GTCTGGTACA TGGCCTATGC ACGCCTCGTG CATAGGCCAT GCACATCTAC CAGAAGGAAT
TTTGGCTAAG GATTATTAAT CTATAATTGA ATAAGTAATT TGCCCTTGAC TTGAGATCGA TTGACATGCA TGTGTTATGC CTAGGCCATG CCTGTATCGT ACATGGGCCA TGCACATCTA
CTAGAACGAA TTTTGGCTAA GGATTAAGGA TTTCTTTTTC ATCACAGGAG TATGAATATC GGGAAAGATG GTATCAAAAT TTGCAAGCCC CTCATGTACT TATCCAAGAA ATGCTATGTT
TACATAATCA ATATATTAAG TGATGTCGCA AATCGTTATT ACTTATTCAT ATATCCACTA ATGAGTTTGC TGCATATGTT TGGCATACAA ATTCCGTTGA GCATTCCTAG CCTTGATCTA
TTCATCCATC TCCATAATTA AGCATCTGCA GATATTTTGT TCTCTTAGCT AACTTTTCGT GCATACGACA ATAAAACAGG AGCTCACACC TTCGGACGTG CACAGTGCAA GTCATTCAAC
CCTAGGCTCT ACAACTTCAC CGCGAACGGT GGCCCTGATC CCACCATAAA CCCGTGGTAC TTGACCAATC TCCGGAAACT TTGCCCTCAG AATGGCGACA GTAGTGTCCT CGCCGACCTC
GACCCGACAA CCCCAAACTT GTTTGACAAC CACTACTACT CCAACCTCCG GAAAAATGAA GGGCTTCTTC TGTCCGATCA AGAGCTGTCC TCCACAAGTG GCGCCGCAAC AATTTCCATC
GTCAACAGCT TTAGCTTTGA CCAGAGTGCC TTCTTCGAGA GCTTCGCTCG GTCGATAGTA AACATGGGAA ATATTAGTCC TCTCACCGGA AGTAACGGGG AGATCCGGTT CAATTGTAGG
AAGGTCAATT GGAGTTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCGGTT CTTCTACTCC TTCCTCGCTG ACGGCGGTGA CCCTTCTCGC CGCATTGTTG TTGTTCCTCA ATCCGTCGAA CGCTCAACTG ACTGCCAATT TTTATGCGAA GACATGCCCG
AGCGTGTCCA GTATTGTCCA AACCGTGATC CAGGAGGCCC TTCAATCTGA CCCACGCATC ACTGCCAGCC TCCTCCGTCT CCATTTCCAC GATTGTTTCG TCGACGGGTG TGATGGATCG
CTGCTGCTGG ACAATAGCCC AACCATAAAG AGCGAGAAAG ATGCAGCTCC GAATTTTAAG TCCGCAAGAG GGTTTGATGT CGTGGACAAG ATCAAAGCGG CTATCGAGAG TGCTTGTCCA
GGGACCGTGT CTTGCGCCGA CATTCTTGCC CTTGCTGCTC AAGCTTCCGT CTCTTTGTCA GAAGGTCCAT ATTGGACAGT GCTCTTGGGG AGGAGGGACA GCTTGACCGC GAACCAAGCC
GGAGCGAACA CATCGATACC CTCCCCTTTT GATAGCTATA ACAACCTCGT TTCCAAATTC TCTGCTGTTG GCTTGGACAT CACCGACCTT GCTACACTTT CCGGAGCTCA CACCTTCGGA
CGTGCACAGT GCAAGTCATT CAACCCTAGG CTCTACAACT TCACCGCGAA CGGTGGCCCT GATCCCACCA TAAACCCGTG GTACTTGACC AATCTCCGGA AACTTTGCCC TCAGAATGGC
GACAGTAGTG TCCTCGCCGA CCTCGACCCG ACAACCCCAA ACTTGTTTGA CAACCACTAC TACTCCAACC TCCGGAAAAA TGAAGGGCTT CTTCTGTCCG ATCAAGAGCT GTCCTCCACA
AGTGGCGCCG CAACAATTTC CATCGTCAAC AGCTTTAGCT TTGACCAGAG TGCCTTCTTC GAGAGCTTCG CTCGGTCGAT AGTAAACATG GGAAATATTA GTCCTCTCAC CGGAAGTAAC
GGGGAGATCC GGTTCAATTG TAGGAAGGTC AATTGGAGTT GA
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Retrieve as FASTA
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