Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
335 (311) |
PWM (Da): |
36135.43 (33809.1) |
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PI (pH): |
7.94 (7.68) |
Peptide Signal: |
cut: 25 range:25-335 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAILALRVVA TATLMSMVVA AAAAQLQVHF YKDSCPQAEL VVKGIIQQRF SADPSIPAGL LRMHFHDCFI RGCDGSVLID SNGNRVAEKD APPNLTLRGF EVIDQIKAEL EKQCKGIVSC
ADILALATRD GVALTGGSVY ALPTGRRDGT VSNISDVHIP GPSFSVAAAA SAMQTINLSL EDLVTLLGAH AMGFCQCGFF VDRLYNFLGS GQADPNIDPQ FLGVLRQKCP RPDPSVPFNL
STDPKIFMTP SSSTPFKLDT SFYRGVLNEQ ATLQLDQELA FTDLTRRMAA DYISQPNAFR RKFAKAMIKL GNVNVLTGQQ GEIRANCRKF NQPSH
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic (exon 1 is missing).
scaffold_4_12776 (73390..72513)
Paternal (g23299.t1): incorrect prediction (splicing error) |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTAAATTGTT CTATTATTTG GAAAATGATA GTGTTTGTGA ATGCTTTCTG TTCAAAGACG CGAAATGACG AATCGTTACT CATTTTTGGT TATATGGTGT GCTGGCATGA CATCAAATTT
TCCCTCTACG TTGTGTACTT TTTCGATCGC TATTCTCTTC ACCAATCTCC TTACTACATA GGTAAATTAA ATTGACACTC ACGCCTACAT GAGAAATGGG TGACTACATA ACGAAATTTC
GTCCATGCCT ATTATTCTGG CCTAATTTTT CGTTTCTCCT CAAAGAAAAA AGAAAAAAAA AAAGAAGAAG ACTATTTTAA TAGGAATAAT GGAAGTGGGA AATCAATTCA ATTAGGGGCA
TAAAAAGAAA GTCTGGTTTC GATATAACCC AACATCGTCA ATTATTTTTC GTAATGAGGT TCGCTTCGTA GGACTTCTGG AATTTGTTTT ATGAGTTCAT GTCAAGCCGA GTCCCAAATG
TTGTATTTTC ACTGAACATG CCAAAATGAA GATGTAATTT CGGTTCTAGT GAATTCACTG GGGCTTCGGG TTTGACGATA TCCATTTCTG TATACATAGG GGTCAGGAAT TTTCGTGAGA
ACAAACGATT TGACATGTTT ATGGAAAATG GAGATGACAA ATCAGAAAGC GCCATGAGTG TGGCACAGTT CTAGAATTCG GCAGGTGGTG CTTTGAGTTA GGATCATGAA AGTTTGTCAA
CACTTTGGAA ATAGTAATTT TGAAATGAAA ACGCTTCATT GGAAAACAAA GAACGAGTTG CCGATATTGC TTTTAGCACT TTTAGCTGTG AAGAATTGAT ATTTTTACTC GAAAGGTCAA
GACAAAAACA ATGGAAAATA AAACCCAATA ATCATTTCAT AAACGATAAA TAAATTTCTC TGTTAGATTG GTCATATATG AGAAAAATGC TGTCCTTTTT ATTGTAACGA TGACACGATC
AAATACATTA TAACTATATA TAGAAGATTT TTTTACTTCA CGTACCAAGA TTTGTTTAAA CCATATACTA TCATAGGTAT ATTTACTTCA TAATATAATG AAAGGACCCC TAATAAATAA
ATCAAAATGC CGTTATATTT CGCATGGATT TGTCAGGGAA ATAGTTGTCT TCACGTGAAC TCTCTAGAAA ACTAGGAAAG TTGCACAAGT TCCAAAGTTG TCAGGACTGG AAAGTTCACG
ACTGCACATG CATGCGATCG GGACTCATTG GTTTCCAAAA CTAGGATGGG TTTTTTGGGG TTTCTATTTT CTTCGCTAGA AAGGACAGTT TTTTAGGGTT GTTTCCATCT TTTTTACCCC
TTGATTCTTG CAATTTACCG CCGTAAATTT CATAAATCGA TTGCAAGGTG CCTCCTCACG TTATTTAGTT TTCTAGTTCG ATCTCATTTT CTACATTTGT TTTTCATATT TACGGTAATT
AAGGGAAAAG AGGCATTTTT CTTATATAAA ATTGAAAATA CACTTTTACA CTTTAAAACT CACGTGCATT GCACATACCA ATAGAAAATA ACGGATAGTT AAAGGCTGTA AAAAGTTGGA
AATTTCATTG GAGTTTTGTG TAATTAAAAA ATAAGAAAAC TATTCAAAGG GGTTAATGAT AATTTACTTT AGTAGCTCCT GAAGTAACTA TCGACAAGTT TATAATATTC TTTGCCTCGA
CCTGGAATTA ATTCCCCATG CCAAATTGCA ATGAAAAACG AGTGAAGAGA ATGAGTTGGA TTGGAATTTG GGCCTACGTA CCCATGGACA AAGCCTACTT CCCCCCCCCC CCCCCCCCCC
AAAAAAAAAA AAAAAAAAAA AAAACTCCTT TTTTGTATGC ATTCGGCTTA GCATTTGAAA AAGGTCTTTT GAGTAAATAT AAAGGATTTG TCTGTCATGC TTTGGCAAAA AGCATCTTGT
AGGTTCCCCT TCGACGAAGG AACTGTGGAG GGACTCGTGG AAAGACCTCA CATGCCAAAT TATGAGACCA ACGCGACTGG
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCAATCT TGGCTCTTCG GGTCGTGGCG ACGGCGACCT TGATGAGCAT GGTGGTGGCG GCGGCGGCAG CACAGCTGCA GGTGCATTTC TATAAGGACT CGTGTCCTCA AGCTGAGCTG
GTGGTGAAGG GGATAATACA GCAGCGCTTC AGCGCCGACC CATCTATTCC CGCCGGTTTG CTTCGTATGC ATTTTCACGA CTGCTTCATC CGTGTAACTC CTATCTCTCT CTCTCTCTCT
CTCTCTCAAA GATACATTTT CTTTCTATGA TATCAACAAA TAATTTTCCT TATGTTTTCT CTCTTACTTT CTTTGGATGA TTTCTTTTGT CACTTCGTGT ACACTTAATT TCGTTGGGAC
TATAAATGGG ATGTATTTTC TCATAGTAAT GTTGAATTGC CTTTCCAAAA ATTTAATCTC TAATCCGATA ATTTGGATAT TCTTGCTCTT TTCTTATTCA TCGTCCATTC CTACAGTTAG
CACGGATTTC TAATTATTAT TCCATCTCAT AATGTTTTTT CTTCTATTGA TTATATTATA AACTTGTTAG CTCCCTTTTG AAAAATCGAG GAATAGAGGT AATATGTGGT TCCATGCTAG
CTCTATTGTG GGCCTTTCAC CCACCTTCAT TCCCCCCAAG CGCGGGTGGC TACTATACCA GTCTTCCCGA TGGTAGCCGG TGCATGCCAC CTTTCTCACC GTGAGGCCCC CAAATTCTCT
ATCCATATTT GTCTTCCCGA CAAATAGGGA ATACAAAGAT AGCACGGGGT CTCCCACCTT AGGATGGTTC TCCCACGTGT TTCTTTTCTT AAGCCTTTTA AGGACCTGCT CAAGTTCATC
TACACATATA TATCAAGAAA GTTAAAAAAT AATAGAAGAC CCCAATTTAT ATTTCACACA ATAAAAGATA CTAGCAAATT TGTCCTCTTT TTTATTACCC TAACCTCTTG GGAATGCTTC
CTAAATTAAG CAATTGACTA GGTACAATTC TCTCATTAAA TTATGCACTT ACATATTATA TCTTAGCACA TGGGCTTTAT CATCCAACTC ATCATGTAGT GAGCATCCAA TGCTTGAACT
ACGGTACTAT ACATCTCTAG ACATTTTTAA CATTTTTCTA ATAAACTAAT ATTTCGTCCT CTTCTGTTTA CCGCGATTAG GGTTGCGATG GCTCGGTCCT CATAGACAGT AATGGCAACA
GGGTGGCCGA AAAAGATGCA CCTCCTAATT TGACCCTAAG GGGGTTTGAG GTCATCGACC AGATAAAAGC CGAGCTAGAG AAGCAGTGCA AGGGGATCGT TTCTTGTGCG GATATATTGG
CCCTAGCCAC CCGAGACGGC GTTGCCCTAA CCGGAGGGTC GGTCTATGCT CTTCCCACTG GACGAAGGGA CGGGACGGTC TCGAACATCA GCGACGTTCA TATTCCCGGA CCATCCTTTT
CCGTTGCTGC GGCAGCTAGT GCCATGCAAA CTATCAACCT CTCCCTAGAA GATCTTGTCA CTTTATTAGG TAAAGCAATG TTCACTTGCT CGAATCCTCA ATCTATAAAT AGGACAAGAC
ATGCTTATTG ATAAGAAGAT GATATCTATG GCCAGGGGCA CATGCGATGG GATTTTGCCA GTGCGGTTTC TTTGTGGACC GGCTCTACAA CTTCTTAGGT TCGGGTCAAG CCGACCCGAA
TATCGACCCG CAATTCCTGG GCGTCCTGAG GCAAAAATGT CCGCGACCCG ACCCCAGTGT CCCGTTCAAT CTCAGTACCG ACCCCAAGAT CTTCATGACG CCATCGTCCA GCACACCTTT
CAAGCTCGAC ACTTCGTTCT ATCGAGGGGT CCTCAATGAA CAGGCAACTC TTCAGTTGGA TCAAGAGCTG GCGTTCACCG ACCTCACGCG CCGGATGGCG GCGGACTACA TCAGCCAACC
CAACGCGTTC CGGCGGAAAT TCGCCAAGGC AATGATCAAG CTGGGGAATG TGAATGTTTT GACTGGACAG CAGGGAGAGA TTAGAGCAAA CTGTAGGAAA TTCAATCAAC CAAGTCATTG
A
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCAATCT TGGCTCTTCG GGTCGTGGCG ACGGCGACCT TGATGAGCAT GGTGGTGGCG GCGGCGGCAG CACAGCTGCA GGTGCATTTC TATAAGGACT CGTGTCCTCA AGCTGAGCTG
GTGGTGAAGG GGATAATACA GCAGCGCTTC AGCGCCGACC CATCTATTCC CGCCGGTTTG CTTCGTATGC ATTTTCACGA CTGCTTCATC CGTGGTTGCG ATGGCTCGGT CCTCATAGAC
AGTAATGGCA ACAGGGTGGC CGAAAAAGAT GCACCTCCTA ATTTGACCCT AAGGGGGTTT GAGGTCATCG ACCAGATAAA AGCCGAGCTA GAGAAGCAGT GCAAGGGGAT CGTTTCTTGT
GCGGATATAT TGGCCCTAGC CACCCGAGAC GGCGTTGCCC TAACCGGAGG GTCGGTCTAT GCTCTTCCCA CTGGACGAAG GGACGGGACG GTCTCGAACA TCAGCGACGT TCATATTCCC
GGACCATCCT TTTCCGTTGC TGCGGCAGCT AGTGCCATGC AAACTATCAA CCTCTCCCTA GAAGATCTTG TCACTTTATT AGGGGCACAT GCGATGGGAT TTTGCCAGTG CGGTTTCTTT
GTGGACCGGC TCTACAACTT CTTAGGTTCG GGTCAAGCCG ACCCGAATAT CGACCCGCAA TTCCTGGGCG TCCTGAGGCA AAAATGTCCG CGACCCGACC CCAGTGTCCC GTTCAATCTC
AGTACCGACC CCAAGATCTT CATGACGCCA TCGTCCAGCA CACCTTTCAA GCTCGACACT TCGTTCTATC GAGGGGTCCT CAATGAACAG GCAACTCTTC AGTTGGATCA AGAGCTGGCG
TTCACCGACC TCACGCGCCG GATGGCGGCG GACTACATCA GCCAACCCAA CGCGTTCCGG CGGAAATTCG CCAAGGCAAT GATCAAGCTG GGGAATGTGA ATGTTTTGAC TGGACAGCAG
GGAGAGATTA GAGCAAACTG TAGGAAATTC AATCAACCAA GTCATTGA
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Retrieve as FASTA
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