Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
202 (173) |
| PWM (Da): |
22095.09 (18710.2) |
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| PI (pH): |
6.78 (5.60) |
Peptide Signal: |
cut: 30 range:30-202 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSRLH*ERTF IRRIISLLHS ILLDLTANN* AEKAAVPNQS LTGFDVIDKI KEKLEETCPL VVYCVDILIL AARDSSGGHT IGVGHCNFFS NRLYNFTGKG DQDLSLDQDL SLDPTYASQL
KAQRKTHSNN VTAVAMDPGS PLSFNSHFYT ALNPN*GLFQ SDTMLLxxDQ DGFFTEFRQS MKQMGAAQVL MGSYGEIRKK CNVIN
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Retrieve as FASTA
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| Remarks |
Pseudogene from genomic (Stops in frame, Gaps in frame). Scaffold_2_3947 (6144..3796).
Paternal: g11672.t1 (fragment) |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTAGAT TGCACTGAGA ACGCACATTC ATTAGAAGAA TCATTTCATT GCTCCATATC ATTGCCACAT GGTTGTAGAA AGAGAGTTTC GCATGGTAAT GTTCCATCGG TGTTTGATCG
GATCGCTTCA TGTGTGTAGG GTTGCAAGCT CGATTTTGCT AGATTTGACG GCAAACAACT AGGCGGAGAA GGCGGCAGTT CCGAACCAGT CGCTAACTGG GTTTGATGTA ATAGACAAGA
TCAAGGAGAA GCTAGAGGAA ACATGCCCCC TCGTCGTCTA TTGTGTTGAC ATCCTCATTT TAGCTGCTCG AGACTCnGGT CTCTATCCAA GTAAGACTTT TCGAGGCGAT GAAAACTCTT
GGACCATTCA TTGGCATCCT TTTGAGTGTG TTTCAACACT TTTGAAGGCT TTTCTTCTTG AGTTAGTAGA ACTTTAGTAA CCTTGTCGAC ACTCCTCGAC ATGTGCTCTT GAACAAAACT
ATTGTGGAAA AAGGCTTTTT TGGAGCATTC CATGGCGACA CTAGACTATC AAGCAAAAAT TTATCTTTCT TCTTTGATAC TATTTTCGAC CACACAAATA CGTCAAAGTC AACCGTATTT
TGATTCATGA TCAATCCATA GACAATAACA ATTATATAGG CATCATAATT TATCGGGAAA AAnnnnnnnn nnnnAAAAAA ATCATAAATC TATTGCATTG AAACAAATTT AATTATAAAC
TTTTTAATTG AACCAATTTA ATCTTAAACA TTTCTACATT AGTACCAATT CAGTCCATCT AACTAATTTA GCCCGGATAA ATAATTAGAC AAATGCAAAA ACAACATCAT TTTGCTGATG
ATGTGGATAT ATAATTAATA TAAAACTTAA TTAATTTAAA TTTAATATGA AATTAAAAAG GGGAGGAAGA AGATGAACGG TTGAAGGTGG CTGAGAGCTC AACCCTTGCC ACCAATGCCT
ACATGAGATC GCTAGGAAGG GCAGGGCCAA CCCTTCCCCA ACCGTCGCCG GCCCTTCCCG ATGACGGCGG GGAGTCGGTG GTGATGTGGG CGGAGCCCTC AACTGCCTCC AACTGTTCAT
CTTCTTGCTT CCTCTCTTTT TTTTAAAAAA nnAGTCGTTT TATATTTAAT TTAATGAAAT TTTATATTAA AATTCAAATC CATGCCAAAA TGACGTTGTT TTTGCATTTC TTTGCTAAGT
CAGCTTTCTA GTGAGTCACA CAAGTGAGCA AGATTAATAA AAATTACCAC GTAAGATTTT CTGCGAGGTT CATTGGAGGT GATATTTAAG TGTCACTTTC CACCTTACCA AAAAAATTCC
ACCTTACCAA AAAAAAAAnG TGTCAATTTC CTAACTTTTG GTACTTAAAT GTCCATTTAT GCCAAGTTTT AGGATTTGGG CCGTACTTTT GCTCACAATA ATTGTATTAG GTTGTCTCAC
TCAAAAATAT ATAATGGAAT ATCTTTTTTn TTTTTTTTCC AAACAAACCA CAGTATAGCA TTGAAGTCCG TGGTGAAATT ATCCGCATTC TTTTTTATCT GGTGTAACGG AGTGTAATTA
CAAAGAATTC TTTTATTTAG TTACTTCACA AATAAGTTAC TATCCTAATG ATnCGAnCAT TGTCAACTAA TAACGGTGTA AGTCGGATCC CACTTTTTAT ATTATATAGG ACGGGCAACC
AGAGCACAGT ATTCGTAATT TCAATATTTC CTATTTATAT AGATTTTGGT TTCCCAATGA GAGAnACATA GCATGTTGAC ATTACAAGTG AAAAAnAAAA AnAACACTCC ATCAAAAACA
CCCAAGCTTT CTCGATTTGA ACAAGACACA GACTTGGACA TTCACTTGCC ATTACACGAG GACAAACTAA CGACTAATCA AAATAAGAAG AGCAGTTGAA TTAATTAGTT AATTAATTAA
GTATAAAATA CATTTCTGGG TCATCAGGTG GGCACACAAT TGGGGTCGGG CACTGCAACT TCTTCAGCAA CCGGCTCTAC AACTTTACTG GCAAAGGCGA CCAAGACCTT TCCCTCGACC
AAGACCTTTC CCTCGACCCG ACCTACGCCT CTCAATTGAA GGCCCAGCGC AAGACGCACT CCAATAACGT CACCGCCGTC GCGATGGACC CCGGAAGCCC CCTCTCCTTC AACAGCCACT
TCTACACAGC CTTGAACCCA AACTAGGGCC TCTTCCAATC CGACACCATG CTTCTGAGCG ACAATCGACA AGTTGCTGnn nnnnGACCAG GATGGCTTCT TCACCGAGTT CAGGCAGTCG
ATGAAGCAGA TGGGCGCAGC CCAGGTGCTT ATGGGGAGCT ATGGCGAGAT CCGGAAGAAA TGTAATGTGA TTAAC
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCTAGAT TGCACTGAGA ACGCACATTC ATTAGAAGAA TCATTTCATT GCTCCACTCG ATTTTGCTAG ATTTGACGGC AAACAACTAG GCGGAGAAGG CGGCAGTTCC GAACCAGTCG
CTAACTGGGT TTGATGTAAT AGACAAGATC AAGGAGAAGC TAGAGGAAAC ATGCCCCCTC GTCGTCTATT GTGTTGACAT CCTCATTTTA GCTGCTCGAG ACTCATCAGG TGGGCACACA
ATTGGGGTCG GGCACTGCAA CTTCTTCAGC AACCGGCTCT ACAACTTTAC TGGCAAAGGC GACCAAGACC TTTCCCTCGA CCAAGACCTT TCCCTCGACC CGACCTACGC CTCTCAATTG
AAGGCCCAGC GCAAGACGCA CTCCAATAAC GTCACCGCCG TCGCGATGGA CCCCGGAAGC CCCCTCTCCT TCAACAGCCA CTTCTACACA GCCTTGAACC CAAACTAGGG CCTCTTCCAA
TCCGACACCA TGTTGCTGnn nnnnGACCAG GATGGCTTCT TCACCGAGTT CAGGCAGTCG ATGAAGCAGA TGGGCGCAGC CCAGGTGCTT ATGGGGAGCT ATGGCGAGAT CCGGAAGAAA
TGTAATGTGA TTAAC
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Retrieve as FASTA
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