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Entry information : AmusGPx01
Entry ID 11670
Creation 2013-02-28 (Christophe Dunand)
Last sequence changes 2013-02-28 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-07-26 (Catherine Mathe (Scipio))
Peroxidase information: AmusGPx01
Name AmusGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Amanitaceae Amanita
Organism Amanita muscaria    [TaxId: 41956 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AmusGPx01
start..stop		 S start..stop
HcyGPx01 273 3.32e-95 9..167 51..209
AthiGPx01 271 6.92e-95 9..167 5..163
HsubGPx01 271 3.18e-94 11..167 55..211
MfiaGPx01 268 6.17e-94 9..166 4..161
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11670' 'join(61113..61240,61290..61312,61362..61429,61480..61653,61723..61830)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 61113..61240 126 N° 2 61290..61312 21 N° 3 61362..61429 66 N° 4 61480..61653 172
N° 5 61723..61830 106  
join(61113..61240,61290..61312,61362..61429,61480..61653,61723..61830)


exon

Literature and cross-references AmusGPx01
DNA ref. JGI genome:   scaffold_109 (61113..61830)
Cluster/Prediction ref. JGI gene:   170222 [Incorrect splicing]
Protein sequence: AmusGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   166 (307)
PWM (Da):   %s   18634.51 (32991.0) Transmb domain:   %s   o35-57i
PI (pH):   %s   8.43 (7.68) Peptide Signal:   %s   cut: 20 range:20-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLDNQTKVSPFYSLKSELGNGQPYDFAELKDKTVLVVNVASKCGFTPQYKGLQALYEKYKDRGLVILGFPCNQFGSQEPQDDKGVGEFCTLNYGVSFPIMKKSDVNGENTNEAYKWLKSE
KPGILGLTRIKWNFEKFLVDKNGKVVNRWASTSTPEAIDSEIAKIL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns). Incorrect prediction from JGI (splicing error, last intron is not predicted).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTAGATAACCAAACCAAAGTATCACCTTTCTATTCGCTCAAAAGCGAACTGGGCAACGGTCAACCATACGACTTTGCAGAGTTGAAAGACAAGACAGTTCTTGTGGTTAACGTTGCT
TCAAAGTGTGGTAGGTTTGCCTGCGATGTTAAGAAATTTCTGGTTGAATCGCAAAACAGCGGTTTCACACCACAATACAAAGAGGTTAGATACAATCCCGCTGTCATTGTATCAAGGTAC
GAAACGCCCACAGGCCTTCAAGCTCTGTACGAAAAGTACAAGGACCGTGGTCTCGTCATCCTCGGTTTCCCTTGCAACCAAAAGTAAGCCAGGAATTGATCTCATCAGTTGCGACGTCAT
ACTCCATCACTAGTTCGGATCTCAAGAGCCTCAAGATGACAAAGGTGTCGGAGAGTTCTGCACACTCAACTACGGCGTTTCCTTCCCGATAATGAAGAAATCCGACGTCAACGGCGAAAA
CACCAACGAAGCGTATAAATGGCTCAAAAGCGAGAAGCCTGGTATACTTGGTCTCACTCGCATCAAGAGGTCAGCGCCCGCATTCCTCCCCCAATTATGAACACATATGCGATAACTTTT
TATTTTTATTTGCCGCAGTGGAATTTTGAGAAATTCCTCGTTGACAAGAACGGCAAGGTCGTCAATCGATGGGCGTCGACAAGCACGCCCGAGGCTATTGACAGTGAAATTGCCAAGATC
CTTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTAGATAACCAAACCAAAGTATCACCTTTCTATTCGCTCAAAAGCGAACTGGGCAACGGTCAACCATACGACTTTGCAGAGTTGAAAGACAAGACAGTTCTTGTGGTTAACGTTGCT
TCAAAGTGCGGTTTCACACCACAATACAAAGGCCTTCAAGCTCTGTACGAAAAGTACAAGGACCGTGGTCTCGTCATCCTCGGTTTCCCTTGCAACCAATTCGGATCTCAAGAGCCTCAA
GATGACAAAGGTGTCGGAGAGTTCTGCACACTCAACTACGGCGTTTCCTTCCCGATAATGAAGAAATCCGACGTCAACGGCGAAAACACCAACGAAGCGTATAAATGGCTCAAAAGCGAG
AAGCCTGGTATACTTGGTCTCACTCGCATCAAGTGGAATTTTGAGAAATTCCTCGTTGACAAGAACGGCAAGGTCGTCAATCGATGGGCGTCGACAAGCACGCCCGAGGCTATTGACAGT
GAAATTGCCAAGATCCTTTAA

Retrieve as FASTA