Entry information : AmusPrxQ
Entry ID 11674
Creation 2013-02-28 (Christophe Dunand)
Last sequence changes 2013-02-28 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-07-26 (Catherine Mathe (Scipio))
Peroxidase information: AmusPrxQ
Name AmusPrxQ
Class Atypical 2-Cysteine peroxiredoxin (type Q)    [Orthogroup: PrxQ001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Amanitaceae Amanita
Organism Amanita muscaria    [TaxId: 41956 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AmusPrxQ
start..stop
S start..stop
AthiPrxQ 277 1.16e-94 1..252 1..249
LbiPrxQ02 261 1.06e-88 1..246 1..223
PcarPrxQ02 253 6.19e-86 16..236 2..214
PcPrxQ02 252 1.95e-85 16..234 2..215
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '11674' 'join(56175..56384,56462..56684,56800..56921,56981..57135,57192..57237)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 56175..56384 208 N° 2 56462..56684 221 N° 3 56800..56921 120 N° 4 56981..57135 153
N° 5 57192..57237 44  
join(56175..56384,56462..56684,56800..56921,56981..57135,57192..57237)


exon

Literature and cross-references AmusPrxQ
DNA ref. JGI genome:   scaffold_79 (56175..57237)
Cluster/Prediction ref. JGI gene:   110241
Protein sequence: AmusPrxQ
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   251
PWM (Da):   %s   26765.44  
PI (pH):   %s   5.95
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPPRKAPASDSADASAPTRRSARISTQSKPEPAAATKRRTTTKNNTKKRSAEAEPGEGEANAEESSTNKKAKPSSETQAPQSDETQDKAAEGGEQEEEEALQPIDIGGTLPTLTLKNEKD
EDVQVADLAAQRGVVMFLVPKADTPGCTTQACGFRDVYSGFTEAGYDVYCLSADAPAAQTKWQTKKELPYHLLSDRNRILIGALGAGEGGKTKRSHFIFEKGGVLVEKVMPVKPNDSSKL
ALEFIKGSGSN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (4 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTCCCAGGAAAGCCCCTGCATCTGATTCTGCAGACGCATCTGCTCCTACAAGGCGATCAGCACGGATCTCAACTCAATCAAAGCCCGAACCAGCTGCCGCTACCAAGAGGCGAACG
ACCACGAAAAACAACACCAAAAAACGCTCTGCTGAGGCTGAGCCAGGCGAAGGAGAGGCGAACGCTGAGGAGTCTAGCACGAACAAGAAG
AGGCAAGTAAAAAATTTCAAATTTCCCCAG
CTTCTGCCTATTAAGAATATCCGAACATCCGATGTATGGTTATGAATAGGCCAAGCCGAGCTCTGAAACTCAGGCACCGCAATCTGATGAGACGCAAGACAAGGCTGCTGAAGGTGGAGA
GCAGGAAGAAGAAGAAGCGCTGCAGCCCATCGATATCGGAGGCACTTTGCCAACTTTAACGCTCAAGAATGAGAAAGATGAGGATGTTCAGGTGGCAGACCTCGCTGCGCAAAGAGGGGT
GGTGATGTTCCTTGTGCCCAAGGCTGATACGC
GCGTACGTCCAGTGCCACCGTCTTCTCATCTTCGCAGGTCTCATTCACAGCCATTCCTTTGTGCCTTGTTTCGTCCTTCTTTGCCCCT
GTGCACTTGCCACGTCGTCAACTACATAGCCGGATGCACCACCCAGGCCTGCGGATTCCGTGACGTCTACTCTGGGTTTACCGAAGCAGGGTACGACGTGTACTGCCTTAGCGCTGATGC
ACCCGCTGCACAGACTAAATGGCAAACCAAG
AGGTTCGTCTCATCCTTTCCCCTCATGATGATGCTCACACACCAACCACGATCATTTTTAGAAAGAGCTCCCTTATCACCTTCTCTCCG
ATCGTAACCGGATCCTTATCGGAGCATTAGGAGCAGGGGAAGGTGGAAAGACAAAGAGAAGCCATTTCATTTTTGAAAAAGGAGGGGTATTGGTAGAAAAGGTGATGCCAGTCAAACCGA
ACGACAG
AGGTACTGTATCCAGCTATGCTAGCCCCTCTTAATTTTGCTGATGGCGTGATTTCTAGTTCGAAGCTGGCGCTCGAATTTATCAAGGGCAGCGGATCAAATTGA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCCTCCCAGGAAAGCCCCTGCATCTGATTCTGCAGACGCATCTGCTCCTACAAGGCGATCAGCACGGATCTCAACTCAATCAAAGCCCGAACCAGCTGCCGCTACCAAGAGGCGAACG
ACCACGAAAAACAACACCAAAAAACGCTCTGCTGAGGCTGAGCCAGGCGAAGGAGAGGCGAACGCTGAGGAGTCTAGCACGAACAAGAAG
GCCAAGCCGAGCTCTGAAACTCAGGCACCG
CAATCTGATGAGACGCAAGACAAGGCTGCTGAAGGTGGAGAGCAGGAAGAAGAAGAAGCGCTGCAGCCCATCGATATCGGAGGCACTTTGCCAACTTTAACGCTCAAGAATGAGAAAGAT
GAGGATGTTCAGGTGGCAGACCTCGCTGCGCAAAGAGGGGTGGTGATGTTCCTTGTGCCCAAGGCTGATACGC
CCGGATGCACCACCCAGGCCTGCGGATTCCGTGACGTCTACTCTGGG
TTTACCGAAGCAGGGTACGACGTGTACTGCCTTAGCGCTGATGCACCCGCTGCACAGACTAAATGGCAAACCAAG
AAAGAGCTCCCTTATCACCTTCTCTCCGATCGTAACCGGATCCTT
ATCGGAGCATTAGGAGCAGGGGAAGGTGGAAAGACAAAGAGAAGCCATTTCATTTTTGAAAAAGGAGGGGTATTGGTAGAAAAGGTGATGCCAGTCAAACCGAACGACAG
TTCGAAGCTG
GCGCTCGAATTTATCAAGGGCAGCGGATCAAATTGA

Retrieve as FASTA