Entry information : AtPrx25(At2g41480 / PER25 / AtperoxP25)
| Entry ID | 118 |
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| Creation | 2006-02-02 (Filippo Passardi) |
| Last sequence changes | 2015-10-22 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Christophe Dunand |
| Last annotation changes | 2020-03-04 (Christophe Dunand) |
Peroxidase information: AtPrx25(At2g41480 / PER25 / AtperoxP25)
| Name | AtPrx25(At2g41480 / PER25 / AtperoxP25) | ||||||||||||||||||||||||||||||||||||
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| Class | Class III peroxidase [Orthogroup: Prx003] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis | ||||||||||||||||||||||||||||||||||||
| Organism | Arabidopsis thaliana [TaxId: 3702 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
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| Tissue types | Mixed tissues Roots |
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| Inducers | Dark growth Drought |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '118' 'complement(join(17296986..17297407,17297935..17298097,17298199..17298378,17298469..17298729))' |
Exons►
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Literature and cross-references AtPrx25(At2g41480 / PER25 / AtperoxP25)
| Literature | REFERENCE 1 Shigeto J, Kiyonaga Y, Fujita K, Kondo R, Tsutsumi Y. Putative cationic cell-wall-bound peroxidase homologues in Arabidopsis, AtPrx2, AtPrx25, and AtPrx71, are involved in lignification. J Agric Food Chem. 2013 Apr 24;61(16):3781-8.
REFERENCE 2 Shigeto J, Nagano M, Fujita K, Tsutsumi Y. Catalytic profile of Arabidopsis peroxidases, AtPrx-2, 25 and 71, contributing to stem lignification. PLoS One. 2014 Aug 19;9(8):e105332. REFERENCE 3 Shigeto J, Itoh Y, Hirao S, Ohira K, Fujita K, Tsutsumi Y. Simultaneously disrupting AtPrx2, AtPrx25 and AtPrx71 alters lignin content and structure in Arabidopsis stem.J Integr Plant Biol. 2015 Apr;57(4):349-56. |
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| Protein ref. | UniProtKB: O80822 |
| DNA ref. | Phytozome 12: Chr2 (17298729..17296986) |
| mRNA ref. | GenBank: NM_129711 |
| Cluster/Prediction ref. | Genebank: 818746 Phytozome Gene 12: 19642476 UniGene: At.42826 |
| Omic ref. | e-FP Browser: At2g41480 ePlant: At2g41480 TAIR: At2g41480 |
Protein sequence: AtPrx25(At2g41480 / PER25 / AtperoxP25)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (chromo 2, 3 introns), 3 cDNA and 6 ESTs. | ||||||||||||
| Promoter► Send to BLAST Send to cis Analysis |
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| Terminator +► Send to BLAST Send to cis Analysis |
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| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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| cDNA► Send to BLAST |
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