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Entry information : LuGPx08(Lus10000601|PACid:23144305)
Entry ID 12045
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuGPx08(Lus10000601|PACid:23144305)
Name LuGPx08(Lus10000601|PACid:23144305)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2003]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuGPx08
start..stop		 S start..stop
LuGPx41 311 6.38e-111 1..163 1..163
NtGPx08-1A 276 3.73e-97 1..160 1..160
LeGPx08 276 6.98e-97 1..160 1..160
VvGPx08 275 9.48e-97 1..160 1..160
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12045' 'complement(join(7321..7500,7581..7699,7788..7849,7933..8009,8256..8309))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 8256..8309 52 N° 2 7933..8009 75 N° 3 7788..7849 60 N° 4 7581..7699 117
N° 5 7321..7500 178  
complement(join(7321..7500,7581..7699,7788..7849,7933..8009,8256..8309))


exon

Literature and cross-references LuGPx08(Lus10000601|PACid:23144305)
DNA ref. Phytozome 12:   scaffold645 (8309..7321)
Protein sequence: LuGPx08(Lus10000601|PACid:23144305)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   163 (259)
PWM (Da):   %s   18406.23 (27979.1) Transmb domain:   %s   i59-76o
PI (pH):   %s   6.11 (6.50) Peptide Signal:   %s   cut: 22 range:22-280
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSEEQQSPHSIYDFTVKNAKGHAVSLGIYKGKVLLIINVASKCGMTNSNHTELNALYHKYKDQGLEILAFPCNQFGAEEPGNNDEIEEFVCSRFKSEFPIFDKIEVNGENASPLYKLLK
TGKWGIFGDDIQWNFVKFLVNKQGQVVDRYYPTTSPLSIEVKT*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGAGCGAAGAACAACAGAGCCCGCATTCCATTTACGATTTCACTGTAAAGGTCAGTCTCTTTTGCTTGCTGCTTGACCTTGAGTTCGACCAACGAATCTCTCTCCTTTCTACCTCG
CTACGAATCCTCTTTGATCATTCATTTATGTAAAAGCTACAACCCGTAGAAAAGTTGATGACTTGGGGGTTGTTTCAGATCATACTTTTCTCTTATCTAATCTATGAAGGAAGACTCCAA
TTCTTTAAGCTCGGTTTACTATTCATCCAAGTCCAACCCCAGTTCTTTTGACTGGTGCAGAAAATGCTAAGGGACATGCTGTAAGTCTCGGTATCTACAAGGGGAAGGTCCTGCTTATTA
TCAATGTTGCTTCCAAATGGTAATCCCCATAATAATTATGATTATTGATTTGTCAAGGACCATGTTGAATCCGTTGTTAATTGGCTTTATTTATTTCTGCAGTGTGGCATGACCAACTCA
AACCACACGGAGCTGAATGCTTTGTATCACAAGTACAAAGATCAAGGTTAACAACTTCATTACCTACCTGATAAAAAGTTCCATCTGTGAGAAGATGAATCTTCACTTGATTTCACAAAC
TGGAGTAACTGCAGGGGGTTGGAGATACTGGCATTCCCTTGCAACCAGTTTGGAGCAGAAGAACCAGGAAACAATGACGAGATTGAAGAATTCGTTTGCAGTAGATTCAAGTCCGAGTTC
CCCATATTCGACAAGGTACATCTGTTTGGCTGGAGAAAGGGGCATTAGTTGTATATCTATTGTCTCATTTGGAATCTGTTGGTGATCATCATCAGATATTGAGGTGAATGGAGAGAATGC
ATCCCCACTGTACAAGTTGTTGAAGACAGGGAAATGGGGAATTTTCGGCGACGACATCCAATGGAACTTTGTCAAGTTCCTTGTCAACAAACAAGGCCAAGTTGTTGATCGTTACTACCC
AACAACTTCTCCCCTAAGCATCGAGGTAAAGACATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGAGCGAAGAACAACAGAGCCCGCATTCCATTTACGATTTCACTGTAAAGAATGCTAAGGGACATGCTGTAAGTCTCGGTATCTACAAGGGGAAGGTCCTGCTTATTATCAATGTT
GCTTCCAAATGTGGCATGACCAACTCAAACCACACGGAGCTGAATGCTTTGTATCACAAGTACAAAGATCAAGGGTTGGAGATACTGGCATTCCCTTGCAACCAGTTTGGAGCAGAAGAA
CCAGGAAACAATGACGAGATTGAAGAATTCGTTTGCAGTAGATTCAAGTCCGAGTTCCCCATATTCGACAAGATTGAGGTGAATGGAGAGAATGCATCCCCACTGTACAAGTTGTTGAAG
ACAGGGAAATGGGGAATTTTCGGCGACGACATCCAATGGAACTTTGTCAAGTTCCTTGTCAACAAACAAGGCCAAGTTGTTGATCGTTACTACCCAACAACTTCTCCCCTAAGCATCGAG
GTAAAGACATAA

Retrieve as FASTA