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Entry information : LuPrx07(Lus10000346|PACid:23156071)
Entry ID 12062
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx07(Lus10000346|PACid:23156071)
Name LuPrx07(Lus10000346|PACid:23156071)
Class Class III peroxidase    [Orthogroup: Prx035]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx07
start..stop		 S start..stop
LuPrx31 619 0 1..316 1..316
EcamPrx191 459 6.4e-163 10..316 7..311
EguPrx191 458 9.29e-163 10..316 7..311
PpePrx28 457 1.88e-162 1..316 1..312
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12062' 'complement(join(82..335,1147..1678,1757..1948,2062..2283))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2062..2283 220 N° 2 1757..1948 190 N° 3 1147..1678 530 N° 4 82..335 252
complement(join(82..335,1147..1678,1757..1948,2062..2283))


exon

Literature and cross-references LuPrx07(Lus10000346|PACid:23156071)
DNA ref. Phytozome 12:   scaffold1041 (2283..82)
Protein sequence: LuPrx07(Lus10000346|PACid:23156071)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   399 (372)
PWM (Da):   %s   43125.75 (40210.2)  
PI (pH):   %s   8.92 (8.75) Peptide Signal:   %s   cut: 28 range:28-399
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAYSSVKSLFVTLFIIGSSVLVSTSNAQLAGNFYARTCPNVQGIVNRVMREAVNREPRLGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSVRGFEVIDTIKTRVESACNA
TVSCADLLAIAARDGVVLLGGPSWQVLLGRRDARTASQSDANNDLPSPFSDLPALISSFTNKGLTAADMTVLSGGHTIGQARCTTFRNRIYNETNIGPNFAANRRANCPSTAGTGDGNLA
PLDLSPNRFDNAYYRELVGQRGLLHSDQQLFSGGSQDALVRTYSTNVNAFARDFANAMIRMGSLSPLTGSNGEIRRFVNGKFCKDPMQANADDISFNGLNVPRNTSSNKMGSNVIFLNID
KIPRLNTLGISLARLHYAPHRGLNPPHTHTRDTEILVVI*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTATTCCTCTGTCAAGTCCTTGTTTGTAACCCTCTTCATTATTGGGTCGTCTGTGCTAGTTTCAACCAGTAACGCCCAACTCGCTGGGAACTTCTACGCTCGAACATGCCCTAAC
GTTCAGGGCATAGTTAATCGTGTAATGAGGGAAGCTGTTAATAGAGAGCCCCGTCTCGGTGCATCTATCCTTCGCTTGTTCTTTCACGATTGTTTCGTCAATGTAAGTTTTCATAAAACA
ATATTAGATTGACCATTGAGTTGAATACCTTCTTGTGCATACAATGTTTGTCACCAAATTTCTAATGTTCACAAGGTTACTTCTTTTTTTGCTAGGGGGATGTGACGGGTCTATTTTGCT
AGACGATACGTCCTCATTTACAGGGGAGAAGAATGCGAATCCTAATCGGAACTCAGTTCGAGGGTTTGAGGTCATTGACACCATCAAAACCAGAGTTGAAAGTGCTTGCAATGCTACTGT
TTCTTGTGCAGATCTACTTGCAATTGCTGCTAGGGACGGTGTCGTATTGGTAATTCTCTTTTCTTCGCTTGCTCATTAAGATCTACCAATTTTCCAACGTAACTATCTGATCAAATTTTG
CATGCAGCTCTTGGTGGGCCATCGTGGCAAGTCCTACTGGGCCGGAGGGACGCAAGAACAGCCAGCCAAAGCGACGCCAACAATGACCTCCCCTCCCCATTCTCCGACCTTCCAGCCCTA
ATCTCATCCTTTACCAACAAGGGCCTAACCGCCGCCGACATGACCGTCCTCTCCGGCGGCCACACCATCGGCCAAGCCAGGTGCACCACTTTCCGCAACCGAATCTACAACGAGACCAAC
ATCGGGCCTAACTTTGCCGCCAACAGAAGGGCCAACTGCCCCTCTACTGCCGGCACGGGCGACGGGAACTTGGCCCCACTCGACTTGTCTCCGAACAGATTCGACAATGCTTATTACAGG
GAGCTTGTGGGCCAACGTGGGCTACTTCATTCCGACCAACAGCTGTTCAGCGGTGGGTCCCAGGATGCTTTGGTCAGGACTTATAGTACGAATGTCAATGCGTTTGCTAGGGATTTTGCA
AATGCCATGATTAGGATGGGGAGCCTTAGTCCTCTCACTGGGAGTAATGGCGAGATTAGGCGTAATTGCAGGATTATAAATTAATTATTTAGAGTACGTAAGGTTTCCAAACATTTATGT
TTGGACGTGTTGTACTACTACTGTGCTCGTGGAGTATTTTAAGAGGTATTGGGTTTCCATACATGCGTCACGTCCATAAATGAATACTTATAAAATGTTGTTTTTTTCTTCGAAAAAATT
ATTTACTTCTTGATAAATTTGTATGTTTATTGGTCGACTCTCAACTTTTTATCAAAAAATAAAAATGATCATCGTCATAGTTGACTTCTATCTTCAGTCACTTAACTCATTATAATAGAA
CTAGTTTAACGAGCAAATATCAAACCAAATGATGATCATCAATCTAATTAACAACTTATTACATATAATTACATTAGATCATTGAAACGGTCGAATGATGATCATTTGTGTAATTAGCTA
ATGAATGGCAGAGGTTTAAGAAACTTCTGGGAAAGGGATGGGTGTGGACTTTCCGCGGAAATGATTACTCTACATAATAATATTGAGCTAGTACACAAATAAGATTAATAACTATTATTT
TAATACAAAAGATTGCAGCAATAAATAAATAAATAAATATATATATATAGTAACCGATGAAGATCTCTACATAATTAATAAGATCAATAACTATTTTAATACAAATTAAGAATTCTGACA
CCTCTGTCCCTATAATTGTAAATACATGTAGCCTACGCTTCCCAGTTCATCATCCACGACCACAACAACAAGGCAATAACACAAAAACATATTAGTTACAATTAGATCCATTCAAAAGAA
CTCCCTCACAATTGATGATCCTAAACATGGAGGGGGTTTGTGAATGGCAAGTTCTGCAAGGATCCCATGCAGGCTAATGCGGATGACATCTCCTTCAATGGACTCAACGTCCCCAGAAAC
ACATCCTCCAACAAAATGGGTTCGAACGTCATTTTTCTCAATATCGACAAGATTCCAAGGCTCAACACCTTAGGAATCTCCTTAGCTCGTCTCCACTACGCTCCCCACAGAGGGCTCAAC
CCACCCCACACCCACACTCGTGACACTGAGATTTTGGTTGTCATTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTATTCCTCTGTCAAGTCCTTGTTTGTAACCCTCTTCATTATTGGGTCGTCTGTGCTAGTTTCAACCAGTAACGCCCAACTCGCTGGGAACTTCTACGCTCGAACATGCCCTAAC
GTTCAGGGCATAGTTAATCGTGTAATGAGGGAAGCTGTTAATAGAGAGCCCCGTCTCGGTGCATCTATCCTTCGCTTGTTCTTTCACGATTGTTTCGTCAATGGATGTGACGGGTCTATT
TTGCTAGACGATACGTCCTCATTTACAGGGGAGAAGAATGCGAATCCTAATCGGAACTCAGTTCGAGGGTTTGAGGTCATTGACACCATCAAAACCAGAGTTGAAAGTGCTTGCAATGCT
ACTGTTTCTTGTGCAGATCTACTTGCAATTGCTGCTAGGGACGGTGTCGTATTGCTTGGTGGGCCATCGTGGCAAGTCCTACTGGGCCGGAGGGACGCAAGAACAGCCAGCCAAAGCGAC
GCCAACAATGACCTCCCCTCCCCATTCTCCGACCTTCCAGCCCTAATCTCATCCTTTACCAACAAGGGCCTAACCGCCGCCGACATGACCGTCCTCTCCGGCGGCCACACCATCGGCCAA
GCCAGGTGCACCACTTTCCGCAACCGAATCTACAACGAGACCAACATCGGGCCTAACTTTGCCGCCAACAGAAGGGCCAACTGCCCCTCTACTGCCGGCACGGGCGACGGGAACTTGGCC
CCACTCGACTTGTCTCCGAACAGATTCGACAATGCTTATTACAGGGAGCTTGTGGGCCAACGTGGGCTACTTCATTCCGACCAACAGCTGTTCAGCGGTGGGTCCCAGGATGCTTTGGTC
AGGACTTATAGTACGAATGTCAATGCGTTTGCTAGGGATTTTGCAAATGCCATGATTAGGATGGGGAGCCTTAGTCCTCTCACTGGGAGTAATGGCGAGATTAGGCGGTTTGTGAATGGC
AAGTTCTGCAAGGATCCCATGCAGGCTAATGCGGATGACATCTCCTTCAATGGACTCAACGTCCCCAGAAACACATCCTCCAACAAAATGGGTTCGAACGTCATTTTTCTCAATATCGAC
AAGATTCCAAGGCTCAACACCTTAGGAATCTCCTTAGCTCGTCTCCACTACGCTCCCCACAGAGGGCTCAACCCACCCCACACCCACACTCGTGACACTGAGATTTTGGTTGTCATTTAG

Retrieve as FASTA