View Redoxidase 12118

Entry information : LuPrx177 ( Lus10032170|PACid:23161274)

Entry ID	12118
Creation	2013-05-28 (Qiang Li)
Last sequence changes	2016-02-03 (Catherine Mathe)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-02-03 (Christophe Dunand)

Peroxidase information: LuPrx177 ( Lus10032170|PACid:23161274)

Name (synonym)

LuPrx177 ( Lus10032170|PACid:23161274)

Class

Class III peroxidase [Orthogroup: Prx002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Linaceae Linum

Organism

Linum usitatissimum (flax) [TaxId: 4006 ]

Cellular localisation

N/D

Tissue type

Embryos

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	LuPrx177 start..stop	S start..stop
LuPrx201	556	0	19..332	15..324
MePrx33	508	0	6..331	4..319
RcPrx41	506	0	28..331	23..320
CclPrx36	504	0	7..331	4..327

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1220166..1221161	994
join(1220166..1221161)

Literature and cross-references LuPrx177 ( Lus10032170|PACid:23161274)

DNA ref.	Phytozome 12: scaffold42 (1220166..1221161)
EST ref.	GenBank: JG190277.1

Protein sequence: LuPrx177 ( Lus10032170|PACid:23161274)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	331 (302)
PWM (Da):	36269.21 (33044.4)
PI (pH):	8.19 (8.19)	Peptide Signal:	cut: 30 range:30-331

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MATQPPPHRP LILLLLSTLL LSLSTTSESS LSYNYYSKSC PRFTQIIQET VTNKQITSPT TAAGTLRLFF HDCFLNGCDA STLISSTSFN RAERDAEINL SLPGDAFDLI VRAKTALELA CPNTVSCSDI LAVATRDLVT MVGGPFYDVP LGRLDYRVSK SSAVPGNLPL PSTPMSQMID MFAARGFSVQ EMVALSGAHT IGFSHCEEFS GDLYNTTATA GGSNYNPRFA AALQKACANY
KKDPSISVFN DIMTPNKFDN VYYQNLPKGL GLLKSDHGLV KDDRTRPFVE IYAKDQNKFF KDFATAMQKL SVYGIKTGRR GEIRHRCDAA N*

Retrieve as FASTA

Remarks

Complete sequence from genomic (no intron) and 1 EST.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCTACAC AACCCCCACC ACACCGGCCG CTGATTCTCC TCCTCCTCTC CACTCTCCTC CTCAGTCTAT CCACAACCTC CGAGTCCAGC CTCTCCTACA ACTACTACTC CAAATCCTGC CCCAGATTCA CCCAAATCAT CCAGGAAACA GTCACAAACA AGCAAATCAC CAGCCCCACC ACCGCCGCCG GCACCCTCCG CCTCTTCTTC CACGACTGTT TCCTCAACGG CTGCGACGCC TCCACTCTAA TCTCCTCCAC CTCCTTCAAC AGAGCCGAGC GCGACGCCGA AATCAACCTC TCACTCCCAG GGGACGCCTT CGACTTAATC GTCCGTGCCA AGACCGCCCT CGAGCTTGCC TGCCCCAACA CGGTCTCCTG CTCCGACATC CTCGCCGTCG CCACACGAGA TCTCGTCACC ATGGTCGGCG GCCCCTTCTA CGACGTCCCG CTCGGCCGCC TCGACTACCG CGTCTCCAAA TCCTCCGCCG TTCCCGGAAA CCTCCCGCTG CCGTCGACCC CGATGTCGCA GATGATCGAC ATGTTCGCCG CCAGGGGATT CTCCGTCCAA GAGATGGTCG CTCTTAGCGG GGCCCACACC ATCGGATTCT CCCACTGTGA AGAGTTCAGC GGAGATCTGT ACAACACCAC CGCCACGGCG GGGGGAAGTA ACTACAATCC GCGATTCGCA GCGGCGTTGC AGAAGGCGTG CGCGAATTAC AAGAAGGACC CGTCGATCTC GGTGTTCAAC GATATAATGA CACCGAACAA ATTCGACAAT GTGTACTACC AGAACTTGCC CAAGGGGCTG GGACTGCTGA AGTCGGACCA TGGATTGGTG AAAGACGATC GCACCCGGCC GTTTGTGGAG ATTTATGCGA AAGATCAGAA CAAGTTTTTC AAGGATTTCG CCACTGCGAT GCAGAAGCTG AGCGTGTATG GTATCAAGAC TGGGAGACGA
GGCGAGATTA GGCACAGGTG CGATGCTGCC AACTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA