Entry information : LuPrx49(Lus10008581|PACid:23180074)
Entry ID 12162
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx49(Lus10008581|PACid:23180074)
Name LuPrx49(Lus10008581|PACid:23180074)
Class Class III peroxidase    [Orthogroup: Prx010]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx49
start..stop
S start..stop
LuPrx63 451 2.04e-161 9..308 25..326
LuPrx168 438 4.17e-156 7..308 23..322
LuPrx64 436 1.93e-155 8..308 24..322
PpePrx55 422 8.1e-150 7..308 32..331
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12162' 'complement(join(4851..5417,5504..5698,5804..5965))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5804..5965 160 N° 2 5504..5698 193 N° 3 4851..5417 565  
complement(join(4851..5417,5504..5698,5804..5965))


exon

Literature and cross-references LuPrx49(Lus10008581|PACid:23180074)
DNA ref. Phytozome 12:   scaffold1686 (5965..4851)
Protein sequence: LuPrx49(Lus10008581|PACid:23180074)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   307
PWM (Da):   %s   33524.24  
PI (pH):   %s   10.44
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAVAQAQLSPTFYKKTCPNPLPAIRRIVRQAIQKEARMGASLLRLHFHDCFVNGCDGSVLLDDTKNFTGEKTAGANANSVRGFDVIDKIKSELNKVCKGNVVSCSDILAVAARDSVYIL
GGPSYFYRLPLGRRDSRTASLNAANNNLPAPFFSFSQLVSSFQSQGLNTKDLIALSGGHTIGQARCTLFRTRVHNDTNIDRNFASSVKRTCPSVTGKGDNNAQPLDQSPARFDTQYYRAL
VQKKGLLHSDQELFGTGNKASDALVRLYSNNPSKFAKDFGVSMIKMGGIKVLTGTRGEVRKNCRRIN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCAGTCGCACAAGCACAACTGTCTCCTACTTTCTACAAGAAAACTTGCCCCAACCCTCTTCCCGCCATTAGACGGATCGTTAGGCAAGCCATCCAGAAGGAGGCCCGAATGGGC
GCCTCCTTGCTCCGGTTGCATTTCCACGATTGCTTCGTCAAT
GTACGTAAGCTTGATCATTAGTCGAGGTATATAGTTCACTATATATATGGTGAATGCTACGGTGACTATGTATTTAAT
ATATCGAATTTTGTAACTATGATATAGGGGGGTGTGACGGGTCGGTGCTGCTGGATGACACTAAGAATTTTACGGGAGAGAAGACGGCTGGGGCGAATGCGAACTCGGTTAGAGGGTTTG
ATGTGATTGATAAGATCAAGTCGGAACTTAACAAAGTTTGTAAGGGCAATGTCGTCTCTTGCTCCGACATTCTGGCTGTGGCTGCTCGTGACTCGGTTTATATT
GTAAGCACACTCACTA
TTCTTTTATCGTTGCATTGAGTGTGATGAATTCGAACTCGTGAACTTACATGTTTAATTTTGTGTTACAGCTCTAGGAGGACCTTCGTACTTCTATCGGCTCCCCTTAGGAAGGCGTGAC
AGTAGGACCGCGAGCCTAAACGCAGCAAACAACAACCTCCCAGCACCATTCTTCAGCTTCTCCCAGCTCGTCTCGAGCTTCCAGTCCCAAGGCCTGAACACGAAGGACCTCATTGCACTC
TCTGGGGGGCACACTATCGGACAGGCTAGGTGCACCCTGTTCCGTACCAGGGTACACAACGACACCAACATAGACCGCAACTTCGCCTCCTCCGTGAAGCGAACTTGCCCCTCTGTGACG
GGCAAAGGGGACAACAACGCCCAACCACTTGACCAGAGCCCTGCAAGGTTCGACACACAGTACTATAGGGCTCTGGTCCAGAAGAAGGGGTTGTTACATTCAGACCAGGAGCTGTTCGGG
ACAGGGAATAAAGCCAGTGATGCTTTGGTTCGGTTGTATAGCAACAACCCGAGCAAATTCGCCAAGGATTTCGGAGTTTCGATGATCAAGATGGGGGGTATTAAGGTTCTCACTGGGACG
AGAGGGGAGGTTAGGAAGAACTGCCGCAGGATTAACTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGCAGTCGCACAAGCACAACTGTCTCCTACTTTCTACAAGAAAACTTGCCCCAACCCTCTTCCCGCCATTAGACGGATCGTTAGGCAAGCCATCCAGAAGGAGGCCCGAATGGGC
GCCTCCTTGCTCCGGTTGCATTTCCACGATTGCTTCGTCAAT
GGGTGTGACGGGTCGGTGCTGCTGGATGACACTAAGAATTTTACGGGAGAGAAGACGGCTGGGGCGAATGCGAACTCG
GTTAGAGGGTTTGATGTGATTGATAAGATCAAGTCGGAACTTAACAAAGTTTGTAAGGGCAATGTCGTCTCTTGCTCCGACATTCTGGCTGTGGCTGCTCGTGACTCGGTTTATATT
CTA
GGAGGACCTTCGTACTTCTATCGGCTCCCCTTAGGAAGGCGTGACAGTAGGACCGCGAGCCTAAACGCAGCAAACAACAACCTCCCAGCACCATTCTTCAGCTTCTCCCAGCTCGTCTCG
AGCTTCCAGTCCCAAGGCCTGAACACGAAGGACCTCATTGCACTCTCTGGGGGGCACACTATCGGACAGGCTAGGTGCACCCTGTTCCGTACCAGGGTACACAACGACACCAACATAGAC
CGCAACTTCGCCTCCTCCGTGAAGCGAACTTGCCCCTCTGTGACGGGCAAAGGGGACAACAACGCCCAACCACTTGACCAGAGCCCTGCAAGGTTCGACACACAGTACTATAGGGCTCTG
GTCCAGAAGAAGGGGTTGTTACATTCAGACCAGGAGCTGTTCGGGACAGGGAATAAAGCCAGTGATGCTTTGGTTCGGTTGTATAGCAACAACCCGAGCAAATTCGCCAAGGATTTCGGA
GTTTCGATGATCAAGATGGGGGGTATTAAGGTTCTCACTGGGACGAGAGGGGAGGTTAGGAAGAACTGCCGCAGGATTAACTAA

Retrieve as FASTA