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Entry information : LuPrx54(Lus10009898|PACid:23150138)
Entry ID 12165
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx54(Lus10009898|PACid:23150138)
Name LuPrx54(Lus10009898|PACid:23150138)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx54
start..stop		 S start..stop
LuPrx58 610 0 1..323 1..320
LuPrx130 594 0 1..323 1..322
LuPrx56 564 0 4..323 8..325
EcamPrx144 480 8.2e-173 11..321 1..306
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12165' 'join(23349..24317)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 23349..24317 967  
join(23349..24317)


exon

Literature and cross-references LuPrx54(Lus10009898|PACid:23150138)
DNA ref. Phytozome 12:   scaffold200 (23349..24317)
Protein sequence: LuPrx54(Lus10009898|PACid:23150138)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (298)
PWM (Da):   %s   35183.83 (32455.3)  
PI (pH):   %s   8.74 (8.75) Peptide Signal:   %s   cut: 25 range:25-322
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTKSSIWVVL LLMLLSIAIS QSEAQQQLST NFYANSCPKA LSTIRRSITT AISRERRMAA SLLRLHFHDC FVQGCDASIL LDQSPTIQSE KMAAPNDKSA RGYEVIDAAK AQVERICPGV  VSCADIIAVA ARDATAYVGG PSWNVKLGRR DSTSAFPDLA LTDLPFFKED LQTLIDRFQG KGLSPRDMVA LSGAHTLGQA QCFTFRDRIY SNGTDIDAGF ASTRRRRCPM VGGDTNLAPF 
DLVTPNSFDN NYFRNLVQRK GLLVTDQVLF SGGSTDSIVL EYSRNRARFN ADFAAAMIRM GDIQPLTGSA GQIRRICGAV NN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACCAAAT CATCCATTTG GGTAGTGTTG TTACTCATGC TGCTGAGTAT TGCAATAAGC CAGTCCGAAG CACAACAACA GCTGTCCACA AACTTCTACG CCAATTCATG CCCCAAAGCT  CTCTCCACCA TAAGGAGATC CATCACCACA GCCATCTCGA GGGAGCGAAG AATGGCCGCG TCTCTACTCC GTCTCCATTT CCACGACTGC TTCGTCCAAG GTTGCGACGC TTCCATATTG  CTCGACCAAT CCCCAACCAT CCAATCCGAG AAAATGGCTG CTCCGAATGA TAAATCAGCT CGAGGCTACG AAGTCATCGA CGCTGCCAAG GCCCAAGTGG AGAGGATATG CCCTGGTGTT  GTCTCGTGCG CAGATATTAT CGCTGTTGCT GCTAGAGATG CTACTGCCTA TGTGGGAGGC CCCTCTTGGA ATGTGAAGCT TGGGAGAAGA GATTCGACTT CTGCTTTCCC TGATTTGGCT  CTTACTGATT TGCCGTTCTT CAAAGAGGAT CTTCAAACTC TTATCGACCG GTTTCAGGGG AAAGGGCTTA GTCCTAGAGA CATGGTCGCC CTCTCTGGGG CTCATACTTT GGGGCAAGCT  CAATGTTTCA CCTTTCGCGA TAGGATTTAT AGCAATGGTA CCGACATTGA TGCTGGATTC GCTAGCACAA GGAGACGTCG ATGCCCGATG GTAGGGGGTG ACACCAATCT GGCACCGTTT  GATCTGGTGA CTCCCAACTC GTTTGATAAT AACTACTTCA GGAATCTTGT ACAGAGGAAG GGATTGCTTG TAACTGACCA AGTTCTCTTC AGTGGGGGAT CTACTGATAG CATTGTGCTA  GAGTATAGTA GGAATCGAGC TAGGTTCAAT GCCGATTTCG CTGCTGCCAT GATTAGGATG GGTGATATCC AGCCGTTGAC CGGTTCTGCT GGGCAAATCA GGAGGATCTG TGGCGCCGTC 
AACAACTGA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACCAAAT CATCCATTTG GGTAGTGTTG TTACTCATGC TGCTGAGTAT TGCAATAAGC CAGTCCGAAG CACAACAACA GCTGTCCACA AACTTCTACG CCAATTCATG CCCCAAAGCT  CTCTCCACCA TAAGGAGATC CATCACCACA GCCATCTCGA GGGAGCGAAG AATGGCCGCG TCTCTACTCC GTCTCCATTT CCACGACTGC TTCGTCCAAG GTTGCGACGC TTCCATATTG  CTCGACCAAT CCCCAACCAT CCAATCCGAG AAAATGGCTG CTCCGAATGA TAAATCAGCT CGAGGCTACG AAGTCATCGA CGCTGCCAAG GCCCAAGTGG AGAGGATATG CCCTGGTGTT  GTCTCGTGCG CAGATATTAT CGCTGTTGCT GCTAGAGATG CTACTGCCTA TGTGGGAGGC CCCTCTTGGA ATGTGAAGCT TGGGAGAAGA GATTCGACTT CTGCTTTCCC TGATTTGGCT  CTTACTGATT TGCCGTTCTT CAAAGAGGAT CTTCAAACTC TTATCGACCG GTTTCAGGGG AAAGGGCTTA GTCCTAGAGA CATGGTCGCC CTCTCTGGGG CTCATACTTT GGGGCAAGCT  CAATGTTTCA CCTTTCGCGA TAGGATTTAT AGCAATGGTA CCGACATTGA TGCTGGATTC GCTAGCACAA GGAGACGTCG ATGCCCGATG GTAGGGGGTG ACACCAATCT GGCACCGTTT  GATCTGGTGA CTCCCAACTC GTTTGATAAT AACTACTTCA GGAATCTTGT ACAGAGGAAG GGATTGCTTG TAACTGACCA AGTTCTCTTC AGTGGGGGAT CTACTGATAG CATTGTGCTA  GAGTATAGTA GGAATCGAGC TAGGTTCAAT GCCGATTTCG CTGCTGCCAT GATTAGGATG GGTGATATCC AGCCGTTGAC CGGTTCTGCT GGGCAAATCA GGAGGATCTG TGGCGCCGTC 
AACAACTGA 

Retrieve as FASTA