Entry information : LuPrx57(Lus10009901|PACid:23150078)
Entry ID 12168
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-05-30 (Qiang LI)
Peroxidase information: LuPrx57(Lus10009901|PACid:23150078)
Name LuPrx57(Lus10009901|PACid:23150078)
Class Class III peroxidase    [Orthogroup: Prx024]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx57
start..stop
S start..stop
PtPrx58 487 2.77e-175 1..320 1..322
PtrtrPrx14 476 3.53e-171 1..320 1..322
MePrx30 472 1.7e-169 22..320 24..324
CroPrx13 468 1.08e-167 11..320 8..321
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12168' 'complement(join(38312..38884,39153..39329,39446..39658))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 39446..39658 211 N° 2 39153..39329 175 N° 3 38312..38884 571  
complement(join(38312..38884,39153..39329,39446..39658))


exon

Literature and cross-references LuPrx57(Lus10009901|PACid:23150078)
DNA ref. Phytozome 12:   scaffold200 (39658..38312)
Protein sequence: LuPrx57(Lus10009901|PACid:23150078)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (296)
PWM (Da):   %s   34525.3 (31720.8)  
PI (pH):   %s   5.76 (5.75) Peptide Signal:   %s   cut: 25 range:25-320
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MDTSLFKLPLYCLVLITLIPLVTCQLDYNFYGGSCPSLTKMVKYGVWSAISNDTRMAASLLRLHFHDCFVNGCDGSVLLDGGEKNALPNRNSARGFEVIDNINANLEKACPGIVSCTDIL
TLAAREAVSLIGGPYWGLALGRRDGMTSSESAANEQLPGPFESLDNITRKFIAKGLDLKDIVVLSGAHTIGFAQCGVVKPRLFDFGGSGGPDPSLDASFLQTLQNICPNQNDSNAKLAPL
DTSSTKFDNLYYKLLMNSSGLLQSDQALMSDNTTASMVINYSKFPFLFYKDFGISMVKMAGIGVLTGSDGEIRKNCRVVN*

Retrieve as FASTA  
Remarks Complete sequence from genomic. Correct prediction.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATACCAGTTTGTTCAAACTTCCCTTGTACTGCCTTGTTCTGATCACGTTGATCCCTCTTGTGACATGCCAACTTGACTACAACTTCTACGGTGGTTCCTGTCCGAGCCTGACAAAG
ATGGTTAAATATGGTGTCTGGTCTGCCATTTCTAATGATACCAGGATGGCTGCTTCCCTCCTGCGCCTTCACTTCCATGATTGTTTTGTTAAC
GTATATATATCAACCTCCAACCAACCA
TAATTGCTCTGTTTTTCTTTGTTGGCTCACCGTATATGTATCACTTCTTCCATGTTGCTGAGCTAGAATTTGGATGCCTGGTTTTATAGGGGGATGTGATGGATCTGTTTTGCTGGACGG
TGGGGAGAAAAACGCCCTTCCGAATCGAAATTCAGCCAGAGGATTTGAAGTCATTGATAACATCAACGCCAACTTGGAAAAAGCCTGTCCCGGAATTGTCTCTTGTACTGATATTCTTAC
TCTTGCAGCCAGAGAAGCGGTTTCTCTC
GTAACATACTAAACCCCCCATCGTCATTTTTAACTTCTTCTCGTAACAAAATCGTTGATTGGTAGCGAAAATTTAACATGGGTTGGCCAAAT
CCAATTTAAAATATGCACTTTTAACAGGGGATTGCAACAGCTCGCAAACTATGCCTGTTTAACAGGGGTTATAAACCCCTGCCAACAGAGACCAAAATCCCTATTGTACGGGTTTGGGCC
TCCGTTTCCCGATATATGTGTAGTGTGTTCTTTTAAGTTGTTCTATTGGTTCTCAGATATAGGAGGGCCATACTGGGGACTTGCTTTAGGCAGGAGGGATGGGATGACATCAAGCGAGAG
TGCAGCAAACGAGCAGCTCCCAGGACCATTCGAGTCATTGGACAACATTACTAGAAAGTTCATAGCAAAGGGTCTCGATTTGAAAGACATAGTTGTGCTCTCAGGAGCGCACACGATTGG
TTTTGCTCAGTGTGGAGTGGTCAAGCCTAGGCTTTTCGACTTTGGTGGCTCTGGGGGACCGGATCCATCGCTCGATGCATCGTTTCTCCAGACCCTACAGAATATCTGCCCAAACCAGAA
TGATTCCAACGCTAAGTTGGCTCCTCTGGATACAAGTTCAACCAAGTTTGATAACCTTTACTACAAGCTACTAATGAATAGCTCAGGGTTGTTGCAGTCCGACCAAGCTTTGATGTCGGA
TAACACGACTGCTTCGATGGTTATTAACTATAGCAAGTTCCCTTTCCTATTCTACAAGGATTTTGGAATTTCAATGGTGAAAATGGCTGGTATTGGCGTGCTCACTGGGAGTGATGGGGA
GATCAGGAAGAATTGTAGGGTGGTAAACTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGATACCAGTTTGTTCAAACTTCCCTTGTACTGCCTTGTTCTGATCACGTTGATCCCTCTTGTGACATGCCAACTTGACTACAACTTCTACGGTGGTTCCTGTCCGAGCCTGACAAAG
ATGGTTAAATATGGTGTCTGGTCTGCCATTTCTAATGATACCAGGATGGCTGCTTCCCTCCTGCGCCTTCACTTCCATGATTGTTTTGTTAAC
GGATGTGATGGATCTGTTTTGCTGGAC
GGTGGGGAGAAAAACGCCCTTCCGAATCGAAATTCAGCCAGAGGATTTGAAGTCATTGATAACATCAACGCCAACTTGGAAAAAGCCTGTCCCGGAATTGTCTCTTGTACTGATATTCTT
ACTCTTGCAGCCAGAGAAGCGGTTTCTCTC
ATAGGAGGGCCATACTGGGGACTTGCTTTAGGCAGGAGGGATGGGATGACATCAAGCGAGAGTGCAGCAAACGAGCAGCTCCCAGGACCA
TTCGAGTCATTGGACAACATTACTAGAAAGTTCATAGCAAAGGGTCTCGATTTGAAAGACATAGTTGTGCTCTCAGGAGCGCACACGATTGGTTTTGCTCAGTGTGGAGTGGTCAAGCCT
AGGCTTTTCGACTTTGGTGGCTCTGGGGGACCGGATCCATCGCTCGATGCATCGTTTCTCCAGACCCTACAGAATATCTGCCCAAACCAGAATGATTCCAACGCTAAGTTGGCTCCTCTG
GATACAAGTTCAACCAAGTTTGATAACCTTTACTACAAGCTACTAATGAATAGCTCAGGGTTGTTGCAGTCCGACCAAGCTTTGATGTCGGATAACACGACTGCTTCGATGGTTATTAAC
TATAGCAAGTTCCCTTTCCTATTCTACAAGGATTTTGGAATTTCAATGGTGAAAATGGCTGGTATTGGCGTGCTCACTGGGAGTGATGGGGAGATCAGGAAGAATTGTAGGGTGGTAAAC
TAG

Retrieve as FASTA