View Redoxidase 122

Entry information : AtPrx29 (At3g17070 / PER29 / AtperoxP29 / ATP40)

Entry ID	122
Creation	2006-02-06 (Filippo Passardi)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-04 (Achraf Jemmat)

Peroxidase information: AtPrx29 (At3g17070 / PER29 / AtperoxP29 / ATP40)

Name (synonym)

AtPrx29 (At3g17070 / PER29 / AtperoxP29 / ATP40)

Class

Class III peroxidase [Orthogroup: Prx037]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue type

Vegetative tissues

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtPrx29 start..stop	S start..stop
AhalPrx23	674	0	1..339	1..339
AlyPrx29	663	0	1..339	1..339
BstrPrx17	652	0	1..339	1..339
CrubPrx64	626	0	1..339	1..342

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '122' 'join(5821048..5821296,5822319..5822679,5822756..5823165)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	5821048..5821296	247	N° 2	5822319..5822679	359	N° 3	5822756..5823165	408
join(5821048..5821296,5822319..5822679,5822756..5823165)

Literature and cross-references AtPrx29 (At3g17070 / PER29 / AtperoxP29 / ATP40)

Protein ref.	UniProtKB: Q9LSP0
DNA ref.	Phytozome 12: Chr3 (5821048..5823165)
mRNA ref.	GenBank: NM_112583
Cluster/Prediction ref.	Phytozome Gene 12: 19660889 UniGene: At.38797
Omic ref.	ePlant: At3g17070 TAIR: At3g17070

Protein sequence: AtPrx29 (At3g17070 / PER29 / AtperoxP29 / ATP40)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	339 (311)
PWM (Da):	36668.15 (33769.7)	Transmb domain:	o403-422i542-564o584-606i763-780o
PI (pH):	4.64 (4.50)	Peptide Signal:	cut: 29 range:29-339

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MKPKSKVAESTAASCFLVMSLLCSCIIGDQMETNNEGLSYSYYEK
TCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKLSSYKV
LTGNEGVIRSVCDKVD

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 3, introns 1 and 3), 2 cDNA and 10 ESTs.

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TCTTCTCTCA TGTTTTTTCT TTTTATTGGT TCACAACTTC ACATTCGATG TACGTATTAC TAGTTTTCAA CGTATTAATG TAATTAAGTT AGCAAAATAT TTATTGTGTT TAGCTGTAAT AAGGGTAGGA CCAATATATT CGTTTATAGA AAGGCTATAT TTTGTCCTTA ACGAATCCAC AAACCTCAAA CTTGACGAGG AACATAGGAA AAGAAACCTA TAACTTTGAT CAGTTTGATG CTACTTTATT AGTATCCAAC AAAAAAAAAA AAACTATGCT TGTGGAAGTT TACCAGTTAC CACTACACTC TACACTCTAG TTGACATTAA ATTAAATTAA AGTAATTTTT CGTATTATAG TTAAATTACT GCTGCATATA TTTTCACAAG AAAGCTTTAC GTTTTCTTAC CAACAAAAAA AAGCTTTACG TTTACTAATA TCACCACATT TATTACTCTT AACGGAGACT CTAGCTCCTC AACTTGTGGA CCTTTGTATG TTATTGCGGA TCTAAAAGAA CACAGAGAAT TAAGAGAAAG CAATAGAGAG AGTTTTAGGA TGACGAAGGG AAATAGTGAA GTCACAGTGT TGATTCCACA TTTGGAAAAC AGCTAGGGAC ATTAATTTCA CCGCAAATTC GTATTAATGA CTTCCACCAA TATTACTCAC TGGAGTCTCT AGAATCTCTA CTCGTCTTTT TCTACTAACC CTACACCTTT GGGTCATTGG GTGTATATAT TTCTTCTGTT GGACTCTGTT TTCTCAATAT ATTGATAACT ATATTCCAAT TATTTATATC TTATAGCCTA TAGACTATAG ATAATGCTTA TCTGATTTTT TATTTTATTT TCTGAAATAT GAACCCTCCA TTGACGATTG TAACAATGAA TGTTTTTTTT TGGGTCTAGC TAGGCCAATT TCTTTTTGCT ATTTTCTCAC GTTTTAGGCC AATGATTGAT GATAAAAAAA AATATATATA TATATATATA TATTCACGTT TCACTTAAAT TTTAGAATAT TTTTTCTTTT CTACTTCTTT TAATTCAATT TAACCAAGCA TTCACATCAT CATATATATA TATATATATA TATATATATG TATGTTGTTG AAATATTTAA TCAAGCATTA TTAGTTTATG ATAAATTAAA ATGCAGAAAA TTGAAATGTT ATTTTATAGT ATAAGAACAG TAATTAAAAG AGAAGGCTAA AAAATCCAAA ATTTGATAAT ACATTAATAG ACATCATGTG GATAGATAAT ATATGTGTGT AGTATATGGA TGCAAACGTG AAAATCAACC TAACTGTTTC ACATTATCCA TGCATGTTGC TTTTACCCAT TCTCTGTCTT GTCTTCTCCA TCAACTGTTA CCTATAACCA TTTATTGAAC CAAACCGGTC CACCGGTTCG CTACTTTTAT GTAAGCAAAT GCGTGATTTC AATTCCCATG TACCGCAACT ATACTGAAAC AAAACAAAAC ACGAATTTTT TTTGGCTATT TCTCTACAAT ATAATTGAAA ACATATACTT TATCCAACAT CATATTAATA CAGATATATT CGGTTCAGAA ACTGTTAACC AACTTTAACC GGAAATATAG TAGTCTTTAA ATTAGTATTG GTTGACTTTT TAATAACTAA TGTCACATCT CTTTAGCAAA ATTTTATAAA TAACGCATAT AACATTAGCC ACATTAGTAA ACCTAGCAAT CTGGTTTCGT TTCGTATAAT GAGTCGAGAG GATGACTAAA CTCAACCCAA AAAAATCAAT AACCTATCGG TTAAAACTAG GTGGGATCTC AAACCAATTT CATGTTTTAA AAATTCTTTT CGGTTGGGAT TATTAATGTC ACGAATTCAC GGGGACTTTC TTCAGCTTCC TATTTATACA TACACTTCCA ATTGCAAATA CACAAGTCAT
CTTCTCTCTC TTTTTTTAGT GTGTGCAAAG TCATCTTCTC TTTTAATATT TACCTAAAAT TCCAAACAAA AGAGAAAGTT

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TGTATATTTA TAATTATCAA ATGTTAAAAA TATTAAAAAA TATAATTAGT ATAAAATTAA AATAGCTTGA AGCATAGTAA CCGGACATAG TAAAACCGGG TTACAAAAGA ATTAACCATA AACAATTTAC CGTTCTCAAA CACTCCTTGC CCAAAATTCA TTGGAGAATC AATTTTCACC CCATCGATCA GAATCATTCG AAATGATTAA TATCATTGAC GCACTACGAT GGTGGACCTT ACGTCCTTGC CACAGTATAA CAAATTTTGA TTTTAACAAA TGGTTTAATG TCTTTTAATG AAATGCTACT TTTTGTTCCC CAGCAAAAAA AAACAAATGT AATATGCAAA TCTGATTTTA TACAAAGAAG GCCCAATTTT TATATTTGCT TAAAAGACGC TACAACAGTT CAAAGCCGGT AACATTGAAT TCAATCCTCT TGCTGCCTAA TATATAGTGC TTCACTGGTT CGTTGTGTTT TCTGTAAGTC CATCTTACCG TCTTAATTTT TTTTAAAGCC TCAGATGTAT GTCAATAATG CTGTAATTTT TTTCTTTTAA AACTACAGGA TTTTTTCTTC TTGTTTAAGT TGTAGTGTTG AAGTTTTAGT TATATGAAAA CTAGACATTA TCGACAGAAA CTTCAAAAAC AAAAACACAA AAGATAAGTT TTAAAAATAA AATTATCAAG AATGAATAAA ATAATATATA CGATTTTTTT TAATAACTAA TATAAGACAT TTTATTTACT TAAAAAAATA TTATAAATAT TATATTTACC ACTTATATTT TATTTTAAAA TATATACATA CAAAAACTTA CAGCTACAAC TAATTCATTT ATACCAAAAA CTCTACAACA ACAAAAGCTA CGACAACAGT CAGCACTAAA AAACTACAGC TACAACCCAA CCAATCACCT AAATAGTTGT TTATCTTCTT GGATCAATTC TGATCATAAC
AATTTATAGT TTACATATAT TTCTGAATTA TTTATAAAA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAAACCAAAGAGCAAAGTTGCAGAATCTACAGCTGCATCATGTTTTCTCGTCATGAGCTTGTTATGCAGCTGCATTATTGGTGACCAAATGGAGACTAATAATGAAGGCTTGTCTTAC
AGTTACTACGAGAAAACTTGTCCCAAAGTCGAAGAGATAGTGAGATCTTCACTTTCATCAATGTTTATACTTGATCCTACTTCTCCTGCAGCCTTGCTAAGGCTTATGTTTCATGACTGC
CAAGTTCAGAGGTTCTCTACCTATAGCCAAATCCATCTCTCATTCTCTCTCTCTATAAGAAAATTCTCAATTTTTGTTTCCAACTCAATATAGGGTTAATTTGGTTTGAAAAGTGTTTAT
ATATTTCGGGATTCGAATTTATACATTTTGTGAATAAACATATCCATTAATTAGATATGATTACTCCGTCAATACATACGACAAATTGGACGTTCCGCGTTCGTACATGTTATGTGGTAC
GTTTTTTCTAACATGAGCTTTCGTTTTTTTTTTTTTAATAAATAAACAAAAGCTTGAGACGTTTTATATATAATTTAAAATTTTTGGTAACTACGTAATTTCTCTTGCACGTGATCGATA
AATTTAGAAGACAACAAGATGCGGAAATTTTTAATATTAAGAAAGTAAACAACATGCGGAAAATTTGCGAAGACCACTTTAATTAGTTAAAAAATGTTACGCCCCATTGTAGAATATATA
TATATATATATATGTATGTATGACGAATGAAGTAATTTTGTTTCATTTATCAGCGCCCATCATGTCATTTACAACATGGGATATAATGGTTTTGTGACTAAATTCATAGGCATGTTTTTT
TATATAATAATGTTGTTATTTAACTTAAATTTATAGGCATTTGCCAAAATAAAATTATAAGCTAAATAGCAACATTATTATTTTGTTTTATTTGGTTTGATAAATATAGCAAAACTAATT
TCATTATTCTGACACGTATGAAAAACAGATATAATGGTCGAGGATATATTGGAGATGATCACATGTTGTTAATCTGAGTTATACAATTTATGGATGAAAATAATAGATTAGACTAGGCAC
TTGACCAAAAAAAAAAAAAAAGAGAGACTAAGCACATGCATGAAAATATTCACTGTTTTTTCTGATATAGATAAGTCACAAAATTTCGTTTCCATACTCTTTGAAAGAGATGGAGAAAAA
CTCGAATTTGTTCTTCGTATTTATTCCATCTCATCATCATCATTAATTGTTGGGAACATGTTACATGTAACAGGGATGTGACGCATCAATCCTACTCGAGCCAATTAGAGACCAACAGTT
CACCGAGCTTGATTCAGCCAAGAACTTCGGAATCAGAAAGAGGGACCTGGTTGGCTCTATCAAAACCTCACTAGAGCTTGAGTGTCCCAAGCAAGTCTCATGCTCTGACGTCATCATCCT
CGCCGCCAGAGACGCCGTGGCTCTCACGGGAGGCCCACTCATCTCCGTGCCATTAGGACGAAAAGACTCCCTCTCCACTCCAAGCAAACACGTGGCAGACTCTGAGCTTCCTCCCTCCAC
TGCTGACGTTGACACTACCTTAAGCCTATTCGCTAACAAAGGCATGACCATCGAAGAGTCCGTGGCCATCATGGGGGTATATAAACATTATTTATATCTTATATCTTATGCATATTTAAT
TCATAGAATAAGATTTCTTCGATCTCTTGTAGGTGCACATACGATAGGAGTCACACATTGCAACAACGTATTATCGCGTTTCGATAACGCAAACGCGACAAGCGAGAACATGGATCCACG
TTTTCAAACGTTCTTGCGTGTTGCTTGTCCAGAGTTTTCTCCAACTTCTCAAGCTGCGGAAGCCACATTTGTCCCCAACGATCAAACTTCGGTGATCTTCGATACAGCTTATTACGATGA
TGCCATCGCGGGACGTGGCAATCTTAGGATTGACTCGGAGATTGGAGCTGATCCACGTACACGTCCATTTGTGGAAGCGTTTGCAGCTGATCAAGACCGTTTCTTCAACGCCTTCTCTTC
CGCGTTTGTAAAATTGTCGTCTTACAAAGTGTTAACCGGGAATGAAGGAGTAATTAGAAGCGTGTGTGACAAGGTTGATTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

AAGTCATCTT CTCTCTCTTT TTTTAGTGTG TGCAAAGTCA TCTTCTCTTT TAATATTTAC CTAAAATTCC AAACAAAAGA GAAAGTTATG AAACCAAAGA GCAAAGTTGC AGAATCTACA GCTGCATCAT GTTTTCTCGT CATGAGCTTG TTATGCAGCT GCATTATTGG TGACCAAATG GAGACTAATA ATGAAGGCTT GTCTTACAGT TACTACGAGA AAACTTGTCC CAAAGTCGAA GAGATAGTGA GATCTTCACT TTCATCAATG TTTATACTTG ATCCTACTTC TCCTGCAGCC TTGCTAAGGC TTATGTTTCA TGACTGCCAA GTTCAGGGAT GTGACGCATC AATCCTACTC GAGCCAATTA GAGACCAACA GTTCACCGAG CTTGATTCAG CCAAGAACTT CGGAATCAGA AAGAGGGACC TGGTTGGCTC TATCAAAACC TCACTAGAGC TTGAGTGTCC CAAGCAAGTC TCATGCTCTG ACGTCATCAT CCTCGCCGCC AGAGACGCCG TGGCTCTCAC GGGAGGCCCA CTCATCTCCG TGCCATTAGG ACGAAAAGAC TCCCTCTCCA CTCCAAGCAA ACACGTGGCA GACTCTGAGC TTCCTCCCTC CACTGCTGAC GTTGACACTA CCTTAAGCCT ATTCGCTAAC AAAGGCATGA CCATCGAAGA GTCCGTGGCC ATCATGGGTG CACATACGAT AGGAGTCACA CATTGCAACA ACGTATTATC GCGTTTCGAT AACGCAAACG CGACAAGCGA GAACATGGAT CCACGTTTTC AAACGTTCTT GCGTGTTGCT TGTCCAGAGT TTTCTCCAAC TTCTCAAGCT GCGGAAGCCA CATTTGTCCC CAACGATCAA ACTTCGGTGA TCTTCGATAC AGCTTATTAC GATGATGCCA TCGCGGGACG TGGCAATCTT AGGATTGACT CGGAGATTGG AGCTGATCCA CGTACACGTC CATTTGTGGA AGCGTTTGCA GCTGATCAAG ACCGTTTCTT CAACGCCTTC TCTTCCGCGT TTGTAAAATT GTCGTCTTAC AAAGTGTTAA CCGGGAATGA AGGAGTAATT
AGAAGCGTGT GTGACAAGGT TGATTGATGT ATATTTATAA TTATCAAATG TTAAAAATAT T

Retrieve as FASTA