1. Browse the Database
  2. View Redoxidase
Entry information : LuPrx222
Entry ID 12240
Creation 2013-05-29 (Qiang LI)
Last sequence changes 2013-05-30 (Qiang Li)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2013-10-24 (Qiang Li)
Peroxidase information: LuPrx222
Name LuPrx222
Class Class III peroxidase     [Orthogroup: Prx023]*
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuPrx222
start..stop		 S start..stop
LuPrx139 636 0 15..330 19..334
MePrx135 457 3.47e-163 1..329 4..328
PpePrx79 448 1.45e-159 3..329 4..332
PtPrx97 445 1.09e-158 24..329 7..309
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12240' 'join(243872..244087,244190..244372,244476..244641,245503..245930)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 243872..244087 214 N° 2 244190..244372 181 N° 3 244476..244641 164 N° 4 245503..245930 426
join(243872..244087,244190..244372,244476..244641,245503..245930)


exon

Literature and cross-references LuPrx222
DNA ref. Phytozome 12:   scaffold145 (243872..245930)
Protein sequence: LuPrx222
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (305)
PWM (Da):   %s   34990.54 (32453.3)  
PI (pH):   %s   5.71 (6.12) Peptide Signal:   %s   cut: 26 range:26-330
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
STSSASLTILLSLLMISCMATNVEAQLRADYYASTCPKLAQIVRR
EVMNAIKAETRMAASLLRLHFHDCFVNGCDGSLLLDGSDSEKLARPNLNSARGFEVVDSIKTAVESQCSGVVSCADILALASRDSVLLSGGPSWKVPLGRRDGLVANQTAANGLPGPFDNLTLIVTKFAAVGLDDISDVISLSGGHT
IGQAKCATFSNRLVNFSQTGSPDPTMESNLVAELQTLCPVNGDGNVTTAFDKGSTDLFDNHYFQNLVNNKGILTSDQVLFSGNEAATAAARNLVQIYSVNQFRFMGDFVKSMIRMGNIGP
ITGSDGEIRKNCRVVNSG

Retrieve as FASTA  
Remarks Partial sequence from genomic. No prediction. 5' end is missing.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGTACTTCATCAGCATCATTGACCATACTATTGTCGCTGCTGATGATCTCGTGTATGGCTACGAATGTCGAAGCCCAACTAAGAGCCGACTACTATGCATCAACGTGCCCGAAACTTGCA
CAAATCGTGCGTAGGGAAGTGATGAATGCAATCAAGGCCGAAACCCGGATGGCAGCCTCCTTGCTCCGCCTTCATTTCCACGATTGCTTTGTCAACACGTACGTATGATTTCATATTCGT
TGTTGATGTTGTTTTTTCGATCTAATTATTATCGGTGTTAGCGAATGAACATATATAATTGTTGTTGTGTCGTTTTTCAGGGATGTGACGGTTCTCTTTTGTTGGATGGGAGTGACAGTG
AGAAGTTAGCGAGGCCTAACTTGAACTCGGCCAGGGGGTTCGAAGTTGTGGACTCGATCAAAACGGCAGTGGAAAGCCAGTGCAGTGGTGTCGTATCTTGTGCTGACATTCTTGCCTTGG
CTTCCCGCGATTCCGTGCTCTTGTGGTATAGTAACTAACTAGATCAACAAACCTATTATTGACTTTGTTTGTTTCTTCAACTTGTTGGGCTTTGCTAAGATATCCAAAAATCCTAATTTA
ACGTGCAGAGTGGAGGCCCGTCGTGGAAAGTGCCGCTAGGGAGAAGAGATGGGCTTGTGGCTAATCAGACTGCTGCTAATGGGCTACCAGGCCCATTTGATAACCTAACACTCATAGTGA
CCAAGTTTGCAGCAGTTGGCCTTGATGATATCTCTGATGTCATCTCCTTGTCAGAGGTAATCTCTATACTAGTCTTTTATGATTAAAAATCCATGTTTTACCCTTTTTGAATTTTGATCG
AGCCTCCTGGTTATCGAGTTGAGTTGTTAGTTAGATAAATGATCGAACCATGTCCACCGGACCGTCTGATTAAAAATCCACTAAAATATGTTATCTTTTTCAAATTTTGATCGAGCCTCG
TAGTTATTCATTCAAGTTGTCGGTTAGACAAATAATCGAACTAGGTGTCCACCAAATCGTCTCTTAGCTCGGATTAAAATGTTACTATTTCAAATTTTTGTTCAACCACTTGATTAGCCA
TTCGAGTTATCGGTTAGACAAATGATTGATCCATGTCCATGCATCAAACTGTCTTTTATGATTAAAAATTCACTATTATATGTTGTCTTTTCTGAATTAGGATCGAGCTTTTTGTCTATC
CATTTGAGCGATGAGTCAAAAAAATGATCAAATAATGTCCACTAAACCGTCTCCTACGATAATAAAAAAAGTAAAAAAAGTAACTATTATATATAACCCTTTTCGAATTTGGATCAAACA
TCTTGGTTATCCATTTGAACAATCAATTATACAAATAATCAAACCATGCCCACCAATGACCAAACCATATCTCTTATGATTAGAATATTACTCTTTTTTTATTTTGATTGAGTCTCCTAG
TTATCCATTCGAGCTATCAGTTAGACAAATGATCGAATCATGCCCATCAAACCATTTTTTTTATTAAACATCCACTATTCTATGTTACCTTTTTCGAATTTTGCCCAGTCTCCTGCTTAT
CCGTTCGAGTTGTCGTTTAGGAAAAATGATCGAACCACTAACCAACCGAAAATAACAGAAAATTTCGGATCCTGTAGGTGGGCACACAATTGGACAAGCAAAATGTGCTACGTTCAGCAA
CAGGCTGGTCAACTTCAGTCAAACCGGGTCCCCGGATCCGACAATGGAGTCCAACTTAGTCGCCGAACTCCAAACCTTGTGTCCGGTGAACGGCGACGGCAACGTCACTACTGCTTTCGA
CAAGGGCTCCACCGACTTGTTCGACAACCACTACTTCCAGAACCTCGTCAACAACAAAGGGATTCTGACCTCCGACCAGGTGTTGTTCTCCGGCAACGAGGCCGCCACCGCAGCCGCCAG
GAACCTCGTCCAGATCTACAGCGTCAATCAGTTTCGGTTCATGGGCGACTTCGTCAAATCGATGATTCGGATGGGGAACATTGGTCCGATTACTGGGTCGGACGGTGAGATCAGGAAGAA
TTGTAGGGTGGTTAATTCAGGTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AGTACTTCATCAGCATCATTGACCATACTATTGTCGCTGCTGATGATCTCGTGTATGGCTACGAATGTCGAAGCCCAACTAAGAGCCGACTACTATGCATCAACGTGCCCGAAACTTGCA
CAAATCGTGCGTAGGGAAGTGATGAATGCAATCAAGGCCGAAACCCGGATGGCAGCCTCCTTGCTCCGCCTTCATTTCCACGATTGCTTTGTCAACGGATGTGACGGTTCTCTTTTGTTG
GATGGGAGTGACAGTGAGAAGTTAGCGAGGCCTAACTTGAACTCGGCCAGGGGGTTCGAAGTTGTGGACTCGATCAAAACGGCAGTGGAAAGCCAGTGCAGTGGTGTCGTATCTTGTGCT
GACATTCTTGCCTTGGCTTCCCGCGATTCCGTGCTCTTGAGTGGAGGCCCGTCGTGGAAAGTGCCGCTAGGGAGAAGAGATGGGCTTGTGGCTAATCAGACTGCTGCTAATGGGCTACCA
GGCCCATTTGATAACCTAACACTCATAGTGACCAAGTTTGCAGCAGTTGGCCTTGATGATATCTCTGATGTCATCTCCTTGTCAGGTGGGCACACAATTGGACAAGCAAAATGTGCTACG
TTCAGCAACAGGCTGGTCAACTTCAGTCAAACCGGGTCCCCGGATCCGACAATGGAGTCCAACTTAGTCGCCGAACTCCAAACCTTGTGTCCGGTGAACGGCGACGGCAACGTCACTACT
GCTTTCGACAAGGGCTCCACCGACTTGTTCGACAACCACTACTTCCAGAACCTCGTCAACAACAAAGGGATTCTGACCTCCGACCAGGTGTTGTTCTCCGGCAACGAGGCCGCCACCGCA
GCCGCCAGGAACCTCGTCCAGATCTACAGCGTCAATCAGTTTCGGTTCATGGGCGACTTCGTCAAATCGATGATTCGGATGGGGAACATTGGTCCGATTACTGGGTCGGACGGTGAGATC
AGGAAGAATTGTAGGGTGGTTAATTCAGGTTGA

Retrieve as FASTA