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Entry information : ParcCIIBA06
Entry ID 12295
Creation 2013-05-30 (Nizar Fawal)
Last sequence changes 2018-01-18 (Catherine Mathe)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-01-18 (Catherine Mathe)
Peroxidase information: ParcCIIBA06
Name ParcCIIBA06
Class Other class II peroxidase type A    [Orthogroup: CIIBA001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Polyporaceae Polyporus
Organism Polyporus arcularius    [TaxId: 5639 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ParcCIIBA06
start..stop		 S start..stop
GsppCIIBA09 604 0 1..361 1..361
GsppCIIBA08 604 0 1..361 1..361
DsCIIBA04 584 0 1..361 1..361
ParcCIIBA04 575 0 23..358 26..361
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12295' 'complement(join(36052..36064,36118..36182,36252..36427,36494..36692,36756..36996,37055..37133,37185..37240,37294..37352,37407..37415,37472..37508,37560..37603,37656..37763))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 37656..37763 106 N° 2 37560..37603 42 N° 3 37472..37508 35 N° 4 37407..37415 7
N° 5 37294..37352 57 N° 6 37185..37240 54 N° 7 37055..37133 77 N° 8 36756..36996 239
N° 9 36494..36692 197 N° 10 36252..36427 174 N° 11 36118..36182 63 N° 12 36052..36064 11
complement(join(36052..36064,36118..36182,36252..36427,36494..36692,36756..36996 ,37055..37133,37185..37240,37294..37352,37407..37415,37472..37508,37560..37603,3 7656..37763))


exon

Literature and cross-references ParcCIIBA06
DNA ref. JGI genome:   scaffold_316 (37763..36052)
Cluster/Prediction ref. JGI gene:   204331
Protein sequence: ParcCIIBA06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   361 (343)
PWM (Da):   %s   38082.03 (36197.9)  
PI (pH):   %s   4.58 (4.47) Peptide Signal:   %s   cut: 19 range:19-361
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MFAKAILALAALAVTIKAAPSPEAVCSQGRRASSAACCVWFDVLDDIQENLFDGGECGEEAHESLRLTFHDAIGFSPKLFREGKFGGGGADGSIIAFSEIETNFHANDGVDEIVEEQRPF
AIKHKVSFGDFIQFAGAVGVSNCAGGPRLQFLAGRSNISQPSPDLLVPEPSDSNDVIFARMGDAGFSPNEIVDLLASHSVAAQDRVDPTIPGTPFDSTPSTFDTQFFVETLLKGTLFPGN
GSNTGELLSPLGGEFRLFSDANIARDARTACEWQSFVNNHASMVSKFEKVMVKLATLGQNPRALTDCSEVIPVPKNVRLPPPTLPAGKTLKDVEAACRATPFPAISAAPGPATTVAPVPP
S*

Retrieve as FASTA  
Remarks complete sequence from genomics (11 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCGCCAAGGCCATTCTCGCTCTTGCCGCGCTTGCGGTCACTATCAAGGCTGCTCCCTCTCCCGAGGCTGTCTGCAGTCAGGGTCGCCGTGCTAGCAGTGCTGCTGTGAGTATTACC
GTTGTATCTGCGTCCCTGCCGATGCTGATGTCGTTTCTAGTGTGCTGTGTCTGGTTCGATGTCCTCGACGACATCCAGGAGAACCTGTACGAGGTGCCGCTTGCAAGTGAGGTGTGCGTG
TACTAATGTTTCCATAGGTGTTCGACGGCGGCGAGTGCGGTGAGGAAGCGCACGAGGTGAGCTGCCTGAATTTGGGCTTCTTTGCGCGTATGTGCTGACCATGCGTTTGCAGTCTCCCTC
CGTGTGAGTAGCGAACCGTAGCTCGTACCGTGCAGCTTGAACTGAGTTGTGGGGCAGTTTTGACCTTCCACGACGCTATCGGCTTCTCGCCCAAGCTCTTCCGCGAGGGCAAGTTCGGGT
ATGTAGCATGCCGTCCTCGAATACGTTCCACCTCTGACGTGGTCCTCACAGCGCGGTGGAGGCGCCGACGGCTCCATCATTGCCTTCTCCGAGATCGAGACCAACTTCCGTACGTGCACA
TCTCGTGGTGTCGGCTTGCAATGTCCTGACTGTCTTCCAGACACGCCAACGATGGTGTGGACGAGATCGTCGAGGAACAGCGTCCCTTCGCCATCAAGCACAAGGTCTCCTTCGGCGACT
TGTGGGTGCTGCTCCTATCGCTCTTCCGTTCGCATTCTAACGGGATATACTATATACAGCACATCCAGTTCGCGGGCGCCGTCGGCGTCTCGAACTGCGCTGGTGGCCCTCGCCTCCAGT
TCCTCGCTGGTCGCTCCAACATCTCGCAGCCGTCGCCCGATCTGCTCGTTCCTGAGCCCTCCGACTCCAACGATGTGATCTTCGCCCGTATGGGCGATGCCGGCTTCTCGCCCAACGAGA
TCGTCGACCTCCTCGCATCCCACTCCGTCGCCGCTCAGGACCGCGTCGACCCCACCATCCCCGTAAGCTCCCTCTGTCTCCCCTCGTAGTACCAGCGGTGTTGCTCACCCCCAATACCCT
CGCAGGGGGCACGCCGTTCGACTCGACCCCGAGCACCTTCGACACCCAGTTCTTCGTCGAGACCCTGCTCAAGGGCACTCTCTTCCCCGGCAACGGCTCCAACACCGGCGAGCTCCTGTC
CCCTCTCGGCGGCGAATTCCGTCTGTTCTCGGATGCTAACATCGCCCGCGACGCGCGCACCGCTTGCGAGTGGCAGTCGTTCGTCAGTACGTACCTCTCGCGCGCCATTCTCCGGGACTC
AACTTGACTCACGGCTCATTCGTCCCACACAGACACAACCACGCGAGCATGGTGTCCAAGTTCGAGAAGGTCATGGTCAAGCTCGCGACCCTCGGCCAGAACCCGCGTGCGCTCACCGAC
TGCTCCGAGGTCATCCCCGTCCCCAAGAACGTCAGGCTTCCGCCCCCGACTCTCCCGGCTGGCAAGACGCTTAAGGACGTTGAGGCTGCGGTACGTGACTCTACAACTGCGGATGCACGC
TGCCAGGTGTGCTGACTACACTTTCGTCTGTCCGGACAGTGTGCCGCGCGACTCCCTTCCCCGCCATCAGTGCCGCGCCCGGCCCCGCGACCACCGTCGCTCCCGTGTACGTTCATCTTT
GTCGTCTGAGTCTGAAGCATAGCTGACTTCGTCCTACAGCCCCCTCCCTCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTTCGCCAAGGCCATTCTCGCTCTTGCCGCGCTTGCGGTCACTATCAAGGCTGCTCCCTCTCCCGAGGCTGTCTGCAGTCAGGGTCGCCGTGCTAGCAGTGCTGCTTGCTGTGTCTGG
TTCGATGTCCTCGACGACATCCAGGAGAACCTGTTCGACGGCGGCGAGTGCGGTGAGGAAGCGCACGAGTCCCTCCGTTTGACCTTCCACGACGCTATCGGCTTCTCGCCCAAGCTCTTC
CGCGAGGGCAAGTTCGGCGGTGGAGGCGCCGACGGCTCCATCATTGCCTTCTCCGAGATCGAGACCAACTTCCACGCCAACGATGGTGTGGACGAGATCGTCGAGGAACAGCGTCCCTTC
GCCATCAAGCACAAGGTCTCCTTCGGCGACTTCATCCAGTTCGCGGGCGCCGTCGGCGTCTCGAACTGCGCTGGTGGCCCTCGCCTCCAGTTCCTCGCTGGTCGCTCCAACATCTCGCAG
CCGTCGCCCGATCTGCTCGTTCCTGAGCCCTCCGACTCCAACGATGTGATCTTCGCCCGTATGGGCGATGCCGGCTTCTCGCCCAACGAGATCGTCGACCTCCTCGCATCCCACTCCGTC
GCCGCTCAGGACCGCGTCGACCCCACCATCCCCGGCACGCCGTTCGACTCGACCCCGAGCACCTTCGACACCCAGTTCTTCGTCGAGACCCTGCTCAAGGGCACTCTCTTCCCCGGCAAC
GGCTCCAACACCGGCGAGCTCCTGTCCCCTCTCGGCGGCGAATTCCGTCTGTTCTCGGATGCTAACATCGCCCGCGACGCGCGCACCGCTTGCGAGTGGCAGTCGTTCGTCAACAACCAC
GCGAGCATGGTGTCCAAGTTCGAGAAGGTCATGGTCAAGCTCGCGACCCTCGGCCAGAACCCGCGTGCGCTCACCGACTGCTCCGAGGTCATCCCCGTCCCCAAGAACGTCAGGCTTCCG
CCCCCGACTCTCCCGGCTGGCAAGACGCTTAAGGACGTTGAGGCTGCGTGCCGCGCGACTCCCTTCCCCGCCATCAGTGCCGCGCCCGGCCCCGCGACCACCGTCGCTCCCGTCCCTCCC
TCTTAA

Retrieve as FASTA