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Entry information : SverCcP01
Entry ID 12414
Creation 2013-06-04 (Nizar Fawal)
Last sequence changes 2013-06-04 (Nizar Fawal)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-20 (Catherine Mathe (Scipio))
Peroxidase information: SverCcP01
Name SverCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Sebacinaceae Sebacina
Organism Sebacina vermifera    [TaxId: 109899 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SverCcP01
start..stop		 S start..stop
PindCcP 602 0 5..392 2..391
SnivCcP01 520 0 33..388 9..365
HanCcP 516 0 45..390 29..373
GmorcCcP01 515 0 37..391 15..371
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 358812..359208 395 N° 2 358663..358744 80 N° 3 358451..358604 152 N° 4 358259..358392 132
N° 5 358058..358201 142 N° 6 357937..358008 70 N° 7 357805..357888 82 N° 8 357639..357750 110
complement(join(357639..357750,357805..357888,357937..358008,358058..358201,3582 59..358392,358451..358604,358663..358744,358812..359208))


exon

Literature and cross-references SverCcP01
DNA ref. JGI genome:   scaffold_8 (359208..357639)
Cluster/Prediction ref. JGI gene:   328086
Protein sequence: SverCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   392
PWM (Da):   %s   42835.71 Transmb domain:   %s   i7-24o75-94i
PI (pH):   %s   9.24
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MALRSLSAVTPALRVCNSRAFSSIPRGAQQAARRTTTLTAKPFARSSARFYATEPGTGKSGSGGATWLLLGVAVAAIGGGYYVYSSPQDAETLAKSGKQAAKAAVGKTPKLEDYQQVYNK
VAQLLDEAGDYDDGSYGPVLVRLAWHASGTYDKETNTGGSNYATMRFNPEALHGANNGLAIARGVLEPLKKEFSWISYGDLWTLAGVAAIQEAGGPKVPWRAGRIDGFEKDVTPDGRLPD
AAQGGDHLRNIFYRMGFNDQEIVALAGAHALGRCHVDRSGFEGPWTFSPTSFTNEFYNLLLNEKWQWRKWNGPKQLEDKKTKSLMMLPTDYALIQDKSFKKTVQAYAADESLFFKDFSAA
FARLLELGVPTSQWVTSTPWELKTLSEQTEKK*

Retrieve as FASTA  
Remarks complete sequence from genomics (7 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCTGCGCTCACTATCTGCTGTTACTCCCGCTCTTCGAGTTTGTAACTCTAGAGCATTCTCTTCTATCCCCCGTGGTGCTCAGCAAGCAGCTCGCAGGACGACGACGTTGACCGCA
AAGCCATTCGCTCGCTCGTCTGCTCGCTTCTATGCTACCGAGCCTGGCACTGGAAAGAGTGGATCTGGTGGTGCTACATGGCTCTTGCTCGGTGTAGCAGTTGCTGCCATTGGAGGAGGC
TACTACGTCTACAGCAGCCCCCAGGACGCAGAGACCCTCGCCAAGTCGGGCAAGCAGGCTGCAAAGGCTGCTGTTGGCAAGACTCCCAAGCTCGAAGACTATCAACAGGTGTATAACAAA
GTTGCTCAACTTTTGGACGAGGCCGGCGACTACGACGGTAAGTGGCGGCCGAACGGGTAAAATCTTATCAGCTTCGTCATTGACTCGATATCGTGAATGTTAAGATATGGCTCATATGGA
CCGGTCCTCGTTCGTCTTGCGTGGCACGCTAGTGGAACGTACGATAAGGAAACCAACACTGGCGGAAGGTTCGTCATTCGACTGCGCAGCAACTTTGTTCCCATGTTGACCACTCTTTAT
TTACAGCACAACTACGCTACCATGCGCTTCAACCCAGAGGCGTTGCACGGTGCCAACAATGGTCTCGCCATTGCCCGAGGTGTTCTCGAACCTTTGAAGAAGGAATTCTCTTGGATTAGC
TACGGAGATCTCTGGACACTTGCTGGTGTTGCCGCAATTCAGGCAAGTTCTGACGTGATTGTTATTTGTGAATTGGTATTGAGACAAATTCTTCTTACAGGAGAAGCTGGTGGACCCAAG
GTTCCCTGGAGGGCTGGACGTATTGATGGTTTCGAAAAGGATGTTACCCCCGATGGTCGTTTGCCAGATGCTGCCCAAGGCGGTGACCATCTCCGAAACATCTTTTACCGCATGGGGTAG
GTGACCAATCAACTGCATGCTAGTTTCTGCTTACTGACATTGTCTATTTGCAGATATTCAATGACCAGGAAATTGTCGCTCTCGCTGGTGCTCACGCCCTTGGTCGCTGCCACGTCGACC
GCTCTGGATTCGAAGGTCCCTGGACTTTCTCTCCTACCTCCTTCACCAACGAATTCTACAACCTCCTCTTGAACGAAAAGTGGGTATCGTCGCCATTCTTGTTCAGGCTTGATCTGACTG
TTCCACAGATATGGCAATGGCGCAAGTGGAATGGACCTAAGCAACTCGAGGACAAGAAGACCAAGTCTCTCATGATGCTTCCGTAAGTTGCATTGTATTTGACTCCTTTCTGGTCTGACT
AGCCTTTTAGTATACCGACTATGCCTTGATCCAAGACAAGTCGTTCAAGAAGACCGTTCAGGCCTACGCCGCTGACGAATCTCTGTTCTTCAAGGAGTGCGTATCTTCTCCGTTTGTAAG
GTATTCTGATGGCTGACATTGGCAACTTAGCTCTTCTCTGCTGCTTTTGCTCGTCTCCTCGAACTTGGCGTTCCTACCTCTCAGTGGGTGACCTCGACTCCTTGGGAGCTCAAGACACTC
TCCGAGCAGACTGAAAAGAAATAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCTGCGCTCACTATCTGCTGTTACTCCCGCTCTTCGAGTTTGTAACTCTAGAGCATTCTCTTCTATCCCCCGTGGTGCTCAGCAAGCAGCTCGCAGGACGACGACGTTGACCGCA
AAGCCATTCGCTCGCTCGTCTGCTCGCTTCTATGCTACCGAGCCTGGCACTGGAAAGAGTGGATCTGGTGGTGCTACATGGCTCTTGCTCGGTGTAGCAGTTGCTGCCATTGGAGGAGGC
TACTACGTCTACAGCAGCCCCCAGGACGCAGAGACCCTCGCCAAGTCGGGCAAGCAGGCTGCAAAGGCTGCTGTTGGCAAGACTCCCAAGCTCGAAGACTATCAACAGGTGTATAACAAA
GTTGCTCAACTTTTGGACGAGGCCGGCGACTACGACGATGGCTCATATGGACCGGTCCTCGTTCGTCTTGCGTGGCACGCTAGTGGAACGTACGATAAGGAAACCAACACTGGCGGAAGC
AACTACGCTACCATGCGCTTCAACCCAGAGGCGTTGCACGGTGCCAACAATGGTCTCGCCATTGCCCGAGGTGTTCTCGAACCTTTGAAGAAGGAATTCTCTTGGATTAGCTACGGAGAT
CTCTGGACACTTGCTGGTGTTGCCGCAATTCAGGAAGCTGGTGGACCCAAGGTTCCCTGGAGGGCTGGACGTATTGATGGTTTCGAAAAGGATGTTACCCCCGATGGTCGTTTGCCAGAT
GCTGCCCAAGGCGGTGACCATCTCCGAAACATCTTTTACCGCATGGGATTCAATGACCAGGAAATTGTCGCTCTCGCTGGTGCTCACGCCCTTGGTCGCTGCCACGTCGACCGCTCTGGA
TTCGAAGGTCCCTGGACTTTCTCTCCTACCTCCTTCACCAACGAATTCTACAACCTCCTCTTGAACGAAAAATGGCAATGGCGCAAGTGGAATGGACCTAAGCAACTCGAGGACAAGAAG
ACCAAGTCTCTCATGATGCTTCCTACCGACTATGCCTTGATCCAAGACAAGTCGTTCAAGAAGACCGTTCAGGCCTACGCCGCTGACGAATCTCTGTTCTTCAAGGACTTCTCTGCTGCT
TTTGCTCGTCTCCTCGAACTTGGCGTTCCTACCTCTCAGTGGGTGACCTCGACTCCTTGGGAGCTCAAGACACTCTCCGAGCAGACTGAAAAGAAATAG

Retrieve as FASTA