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Entry information : RsoDCMD01
Entry ID 12503
Creation 2013-08-13 (Christophe Dunand)
Last sequence changes 2013-08-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-14 (Christophe Dunand)
Peroxidase information: RsoDCMD01
Name RsoDCMD01
Class Double CMD (peroxidase activity)    [Orthogroup: DCMD002]
Taxonomy Bacteria Proteobacteria Betaproteobacteria Burkholderiaceae Ralstonia
Organism Ralstonia solanacearum    [TaxId: 305 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsoDCMD01
start..stop		 S start..stop
CtaiDCMD01_LMG19424 330 2.71e-117 11..201 7..196
RsoCMD01_GMI1000 60 0.000000000011 48..179 53..183
CtesDCMD 57 0.000000000704 28..179 237..387
CtaiCMD01_LMG19424 54 0.00000000243 19..179 22..183
Literature and cross-references RsoDCMD01
Protein ref. UniProtKB:   Q8XXB7
DNA ref. GenBank:   NC_003295.1 (2380887..2380282)
Protein sequence: RsoDCMD01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   201 (296)
PWM (Da):   %s   22338.33 (31703.1)  
PI (pH):   %s   6.15 (9.41) Peptide Signal:   %s   cut: 25 range:25-320
Sequence
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Send to Peroxiscan
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MTAITPPSHP PISRFPVPEL ADIPGDIRER ILAVQEKTGF VPNVFLALAH RPDECRAFFA YHDALMLREA GSLTKGEREM IVVATSAANQ CLYCVIAHGA ILRIYEKQPL IADQVAVNYR 
KADITPRQRA MLDFAMQVCT ASHTVNEADY DALHVHGFTD EDVWDIAGIT AFFGLSNRIA NVISMRPNDE FYLLGRLPRE K 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
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ATGACAGCCA TCACGCCGCC CAGCCACCCT CCCATCAGCC GCTTTCCCGT GCCCGAGCTC GCGGACATCC CCGGGGATAT CCGCGAGCGC ATCCTCGCCG TGCAGGAAAA GACCGGCTTC  GTGCCCAACG TCTTCCTCGC GCTGGCCCAT CGGCCCGACG AGTGCCGCGC CTTCTTCGCC TACCACGACG CGCTGATGCT GCGCGAAGCC GGCAGCCTGA CCAAGGGCGA GCGCGAGATG  ATCGTGGTGG CCACTTCCGC CGCCAACCAG TGCCTGTACT GCGTGATCGC GCATGGTGCC ATCCTGCGCA TCTACGAAAA GCAGCCGCTT ATCGCCGACC AGGTGGCCGT CAACTACCGC  AAGGCCGACA TCACGCCGCG CCAGCGCGCC ATGCTGGATT TCGCGATGCA GGTCTGCACC GCCTCGCACA CCGTCAACGA AGCCGACTAC GACGCGCTGC ACGTGCACGG CTTCACCGAC  GAGGACGTCT GGGACATCGC CGGCATCACG GCGTTCTTCG GCCTGTCGAA CCGGATCGCC AATGTGATCT CGATGCGGCC GAATGACGAG TTTTATCTGC TGGGGCGGCT GCCGCGCGAA 
AAATGA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAGCCA TCACGCCGCC CAGCCACCCT CCCATCAGCC GCTTTCCCGT GCCCGAGCTC GCGGACATCC CCGGGGATAT CCGCGAGCGC ATCCTCGCCG TGCAGGAAAA GACCGGCTTC  GTGCCCAACG TCTTCCTCGC GCTGGCCCAT CGGCCCGACG AGTGCCGCGC CTTCTTCGCC TACCACGACG CGCTGATGCT GCGCGAAGCC GGCAGCCTGA CCAAGGGCGA GCGCGAGATG  ATCGTGGTGG CCACTTCCGC CGCCAACCAG TGCCTGTACT GCGTGATCGC GCATGGTGCC ATCCTGCGCA TCTACGAAAA GCAGCCGCTT ATCGCCGACC AGGTGGCCGT CAACTACCGC  AAGGCCGACA TCACGCCGCG CCAGCGCGCC ATGCTGGATT TCGCGATGCA GGTCTGCACC GCCTCGCACA CCGTCAACGA AGCCGACTAC GACGCGCTGC ACGTGCACGG CTTCACCGAC  GAGGACGTCT GGGACATCGC CGGCATCACG GCGTTCTTCG GCCTGTCGAA CCGGATCGCC AATGTGATCT CGATGCGGCC GAATGACGAG TTTTATCTGC TGGGGCGGCT GCCGCGCGAA 
AAATGA 

Retrieve as FASTA