Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
367 (346) |
| PWM (Da): |
40258.97 (37815.6) |
Transmb domain: |
i5-22o |
| PI (pH): |
7.1 (6.85) |
Peptide Signal: |
cut: 22 range:22-367 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGRCLVLWVW VFVVVFVLLL AIDKSRDVTC RGSAHFNLQV SNSNSGGALG PGPTPSPSAL RYDFYRFVCP NAENIIRSTV QELAQNFSNV APALLRMVFH DCFVQGCDAS ILLDSVDGFS
PEKEAFPNAN SLRGYEFIDF IKATLEKVCP LTVSCADIIA LSARDAVRMA GGPFIRLATG RRDGTRSIAT VAEANLPSPD EDAEKFSNKF MEMGFDYRDI VSLLGAHTIG RSHCRFFEGR
FNDFRGTGKR DPTMGASFAD ELRSMCNRSG TVPMDNGRDQ VFDPHYYKNI VAGKGVLHVD QALNAFQNTS SVVHAYAADN STFYRDFARA MVKLTSLGVL TGQEGQIRQN CSKVVRGGYY
TEPEIVP
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic. Correct prediction.. No ortholog in Picea or Pinus???? |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGAAGGT GCTTGGTGCT TTGGGTTTGG GTTTTCGTGG TGGTTTTCGT GCTGTTGCTA GCAATTGATA AATCCAGAGA CGTCACTTGC AGAGGCTCTG CTCACTTCAA CCTGCAGGTC
TCCAATTCGA ACTCGGGCGG CGCTCTTGGT CCTGGTCCTA CTCCTAGTCC TTCAGCCTTG AGATATGATT TTTATCGCTT TGTTTGCCCC AATGCGGAGA ATATCATTAG ATCCACCGTG
CAAGAACTCG CCCAAAATTT CTCCAACGTC GCTCCTGCAC TCCTGCGCAT GGTATTCCAC GACTGCTTCG TCCAGGTAAA TTCGAAAGAT AAGAAATCTA CTAGAATGCC GAAAATTTGT
TTGAATCTGA GATTAATTTA ACAAGATTTA TTTCATTACA GGGCTGCGAC GCGTCTATTC TTTTGGATTC AGTGGACGGG TTTTCGCCAG AGAAAGAAGC GTTCCCGAAT GCGAATTCTT
TGAGAGGGTA TGAATTCATT GATTTTATCA AAGCTACACT GGAAAAGGTG TGCCCTCTCA CTGTCTCATG CGCTGATATT ATCGCCTTAA GTGCCAGAGA CGCCGTCAGA ATGGTAATTG
CAGTTCTTGA TTTCTTCCAG CTGTAATTCC AGTTCTTGAT TTCTTCGAGT TCTTGTTTAT GTATTTTGTC ATGTGCAGGC GGGTGGACCG TTCATTCGTC TGGCCACTGG AAGACGAGAT
GGGACAAGAT CGATTGCCAC TGTAGCAGAG GCCAACCTTC CGTCCCCCGA CGAGGATGCG GAGAAATTCT CCAATAAGTT CATGGAGATG GGCTTTGACT ACAGAGACAT CGTCAGTCTG
CTCGGTAATT CCATTCAAGA AACCTTTTCC ACTAATTTTT GTGGGAATCG AACCCTAGCC CTAGGGTCCA GAAGAAATTT AACCTTTCTG TAAGTGCAGG TGCGCACACC ATCGGTAGGT
CACACTGCCG ATTCTTCGAA GGCCGGTTCA ACGATTTCAG AGGCACCGGC AAGCGCGACC CAACCATGGG TGCGAGTTTC GCCGACGAAC TGAGGTCCAT GTGTAACCGC AGCGGCACGG
TTCCGATGGA CAACGGCCGC GATCAAGTCT TCGACCCTCA TTACTACAAG AACATCGTTG CTGGCAAGGG GGTGTTGCAT GTCGACCAGG CCCTCAACGC ATTTCAAAAT ACCAGCAGCG
TAGTGCACGC TTATGCCGCG GATAACTCCA CCTTCTACAG GGACTTTGCT CGGGCTATGG TGAAGCTTAC CAGCTTAGGC GTCCTCACCG GGCAAGAGGG ACAGATTCGG CAAAACTGTT
CAAAGGTTGT GCGTGGAGGG TATTACACAG AGCCAGAAAT AGTCCCATGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGAAGGT GCTTGGTGCT TTGGGTTTGG GTTTTCGTGG TGGTTTTCGT GCTGTTGCTA GCAATTGATA AATCCAGAGA CGTCACTTGC AGAGGCTCTG CTCACTTCAA CCTGCAGGTC
TCCAATTCGA ACTCGGGCGG CGCTCTTGGT CCTGGTCCTA CTCCTAGTCC TTCAGCCTTG AGATATGATT TTTATCGCTT TGTTTGCCCC AATGCGGAGA ATATCATTAG ATCCACCGTG
CAAGAACTCG CCCAAAATTT CTCCAACGTC GCTCCTGCAC TCCTGCGCAT GGTATTCCAC GACTGCTTCG TCCAGGGCTG CGACGCGTCT ATTCTTTTGG ATTCAGTGGA CGGGTTTTCG
CCAGAGAAAG AAGCGTTCCC GAATGCGAAT TCTTTGAGAG GGTATGAATT CATTGATTTT ATCAAAGCTA CACTGGAAAA GGTGTGCCCT CTCACTGTCT CATGCGCTGA TATTATCGCC
TTAAGTGCCA GAGACGCCGT CAGAATGGCG GGTGGACCGT TCATTCGTCT GGCCACTGGA AGACGAGATG GGACAAGATC GATTGCCACT GTAGCAGAGG CCAACCTTCC GTCCCCCGAC
GAGGATGCGG AGAAATTCTC CAATAAGTTC ATGGAGATGG GCTTTGACTA CAGAGACATC GTCAGTCTGC TCGGTGCGCA CACCATCGGT AGGTCACACT GCCGATTCTT CGAAGGCCGG
TTCAACGATT TCAGAGGCAC CGGCAAGCGC GACCCAACCA TGGGTGCGAG TTTCGCCGAC GAACTGAGGT CCATGTGTAA CCGCAGCGGC ACGGTTCCGA TGGACAACGG CCGCGATCAA
GTCTTCGACC CTCATTACTA CAAGAACATC GTTGCTGGCA AGGGGGTGTT GCATGTCGAC CAGGCCCTCA ACGCATTTCA AAATACCAGC AGCGTAGTGC ACGCTTATGC CGCGGATAAC
TCCACCTTCT ACAGGGACTT TGCTCGGGCT ATGGTGAAGC TTACCAGCTT AGGCGTCCTC ACCGGGCAAG AGGGACAGAT TCGGCAAAAC TGTTCAAAGG TTGTGCGTGG AGGGTATTAC
ACAGAGCCAG AAATAGTCCC ATGA
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Retrieve as FASTA
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