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Entry information : GbPrx29(Ginbil_Gb_30611 / Peroxidase16)
Entry ID 12658
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2020-12-08 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-11 (Christophe Dunand)
Peroxidase information: GbPrx29(Ginbil_Gb_30611 / Peroxidase16)
Name GbPrx29(Ginbil_Gb_30611 / Peroxidase16)
Class Class III peroxidase    [Orthogroup: Prx205]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx29
start..stop		 S start..stop
GbPrx49 524 0 5..328 21..344
PtaPrx99 443 1.2e-157 23..328 25..331
SmPrx80-1_13 385 8.6e-135 7..328 16..327
SmPrx80-2_66 384 1.87e-134 24..328 20..321
Literature and cross-references GbPrx29(Ginbil_Gb_30611 / Peroxidase16)
Protein sequence: GbPrx29(Ginbil_Gb_30611 / Peroxidase16)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (304)
PWM (Da):   %s   35543.38 (32888.8) Transmb domain:   %s   i7-24o
PI (pH):   %s   10.07 (9.75) Peptide Signal:   %s   cut: 25 range:25-328
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVRLRSIVII LVFAVSLFER GVVGQLSVNF YGRKCPNVES IIRGVMVQKL KESPLITAPA TLRLFFHDCF VNGCDGSVLI SSRPGNRAER DAPPNLSLAG DAFDVVVRAK NALEKSCPGM  VSCADILAVL ARDATVLANG PSWQVLKGRR DGRVSLASNA NVNLPGPDFN VTQLVISFAS KGLSALDMVI LSGAHTIGNS HCSAVTNRLY KFSPSNPTDP SINPSLVGSL KQACPAFGGN 
PNIVQPFDRL TPFNFDNLYY RNLQQRQGLL TSDQILFSDR RTRNAVVQFA NNQTQYFMAF AAAMQKMGNI GIKTGNQGEI RRDCTRIN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold5643) and RNA seq (gba_locus_21987_iso_1_len_1246_ver_2). Incorrect prediction from medicinal plant genomics. No EST found.
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTCAGGT TAAGGAGTAT TGTGATTATT CTGGTTTTCG CTGTGAGTTT GTTCGAAAGG GGTGTGGTGG GGCAGTTGTC TGTGAACTTT TATGGAAGGA AATGTCCCAA TGTGGAGTCC  ATCATAAGAG GTGTTATGGT GCAGAAGCTT AAGGAGTCCC CCTTAATCAC TGCTCCTGCT ACTCTCAGAC TCTTCTTCCA CGATTGCTTT GTCAATGGCT GTGATGGGTC GGTGCTGATT  TCATCGAGGC CAGGTAACCG GGCAGAAAGA GATGCGCCTC CCAATCTGTC ATTGGCAGGA GATGCATTTG ATGTGGTTGT CAGAGCTAAA AATGCATTGG AGAAATCATG TCCGGGGATG  GTTTCCTGTG CAGATATTCT TGCTGTCTTA GCCAGAGATG CGACTGTTTT GGCAAATGGG CCATCATGGC AAGTATTGAA AGGGCGCAGA GACGGACGAG TGTCTCTGGC ATCCAATGCC  AATGTGAATT TACCAGGACC GGATTTCAAT GTGACTCAGC TAGTCATAAG TTTTGCTTCC AAAGGGCTCT CTGCACTGGA CATGGTCATT TTGTCAGGAG CTCATACAAT AGGCAATTCA  CACTGCAGCG CAGTGACGAA TAGATTATAT AAGTTCAGCC CATCCAACCC GACGGATCCA TCCATCAATC CATCACTTGT AGGGTCGCTA AAGCAAGCAT GCCCTGCGTT TGGTGGCAAT  CCCAACATAG TTCAACCCTT CGACCGCCTA ACTCCCTTCA ATTTTGATAA TTTATACTAC AGAAATCTTC AGCAACGACA GGGCCTGCTC ACTTCCGATC AAATTCTGTT TTCAGACCGT  CGAACTCGTA ATGCGGTGGT GCAGTTCGCC AACAACCAGA CTCAATACTT CATGGCCTTT GCAGCTGCTA TGCAAAAAAT GGGTAATATT GGCATTAAGA CGGGTAATCA AGGAGAGATC 
CGAAGGGATT GTACCAGAAT TAACTGA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCGGCCACTG GAGTCTCTGT CAAAGTGTCA TCCAGACGAG AGCAAAAAGC ACTGACAGCA GCACTTGCAG GCACGTTAAT ACACATATGA GTTGACACGG AGAGCGATAG GGACTCTGGG  AAAAATCAAA AGAAATTAAT CGTTTGAAGA AATATATCCC AACAACATGG TCAGGTTAAG GAGTATTGTG ATTATTCTGG TTTTCGCTGT GAGTTTGTTC GAAAGGGGTG TGGTGGGGCA  GTTGTCTGTG AACTTTTATG GAAGGAAATG TCCCAATGTG GAGTCCATCA TAAGAGGTGT TATGGTGCAG AAGCTTAAGG AGTCCCCCTT AATCACTGCT CCTGCTACTC TCAGACTCTT  CTTCCACGAT TGCTTTGTCA ATGGCTGTGA TGGGTCGGTG CTGATTTCAT CGAGGCCAGG TAACCGGGCA GAAAGAGATG CGCCTCCCAA TCTGTCATTG GCAGGAGATG CATTTGATGT  GGTTGTCAGA GCTAAAAATG CATTGGAGAA ATCATGTCCG GGGATGGTTT CCTGTGCAGA TATTCTTGCT GTCTTAGCCA GAGATGCGAC TGTTTTGGCA AATGGGCCAT CATGGCAAGT  ATTGAAAGGG CGCAGAGACG GACGAGTGTC TCTGGCATCC AATGCCAATG TGAATTTACC AGGACCGGAT TTCAATGTGA CTCAGCTAGT CATAAGTTTT GCTTCCAAAG GGCTCTCTGC  ACTGGACATG GTCATTTTGT CAGGAGCTCA TACAATAGGC AATTCACACT GCAGCGCAGT GACGAATAGA TTATATAAGT TCAGCCCATC CAACCCGACG GATCCATCCA TCAATCCATC  ACTTGTAGGG TCGCTAAAGC AAGCATGCCC TGCGTTTGGT GGCAATCCCA ACATAGTTCA ACCCTTCGAC CGCCTAACTC CCTTCAATTT TGATAATTTA TACTACAGAA ATCTTCAGCA  ACGACAGGGC CTGCTCACTT CCGATCAAAT TCTGTTTTCA GACCGTCGAA CTCGTAATGC GGTGGTGCAG TTCGCCAACA ACCAGACTCA ATACTTCATG GCCTTTGCAG CTGCTATGCA  AAAAATGGGT AATATTGGCA TTAAGACGGG TAATCAAGGA GAGATCCGAA GGGATTGTAC CAGAATTAAC TGACCTGTAG AATGGAAAAT TTTGTCGAAT TAACTATTCG CTATGGCTTG 
AATAAATATT CGACAATTTC CTAGAAATAG TTTTGTTGTA TTTTTC 

Retrieve as FASTA