Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
317 (294) |
| PWM (Da): |
33478.46 (31033.2) |
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| PI (pH): |
7.89 (7.70) |
Peptide Signal: |
cut: 24 range:24-317 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MMRSLVCISV IAFVCSINNA VHGQLSSTFY STSCPTVLSV VKAAVKQAVA SEKRMGASLV RLHFHDCFVN GCDGSVLLDD NSTFTGEKTA GPNNNSLRGF DVIDTIKTKV EAACSGVVSC
ADIVAIAARD SVVQLGGRTW TVLLGRRDST TASLSTANTN LPSPASTLSA LMTAFQAQNL STKDLVALSG AHTIGQARCT TFRNRIYNDS NINASFATSV KANCPSTGGD DTLSPLDVLT
PTTFDNKYYS NLKSQKGLFH SDQELFNGGS TDSQVTTYSN NQNTFFTDFA TAMVNMGNIS PLTGTSGEIR TNCRKAN
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and RNA seq (comp95587_c1_seq13). Incorrect prediction from genomic (PS and fragment in the last exon are missing). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGATGAGGT CTCTCGTATG CATTTCTGTA ATAGCATTTG TATGCTCCAT TAATAACGCT GTGCATGGGC AACTGAGCTC AACGTTTTAT TCCACGTCGT GTCCGACGTG TGCATGGGCA
ACTGAGCTCA ACGTTTTATT CCACGTCGTG TCCGACGGTG CTGTCAGTCG TGAAAGCCGC GGTGAAGCAA GCAGTCGCCA GCGAGAAAAG GATGGGGGCG TCCTTGGTCC GCCTTCACTT
CCACGACTGC TTCGTTAATG TACAGAGAAA CAAGAATTTC ATTAAGGAGA TCATGAGTAA CAAATCACTT CTGCTTTTCT CGTCTCATCA TGTTGAATTT TGGCTTTTGT TTGCTGCAGG
GGTGTGATGG TTCGGTGTTG TTGGACGACA ACTCGACGTT TACAGGAGAA AAGACTGCAG GACCGAATAA CAATTCCCTG AGAGGATTCG ACGTAATCGA CACCATCAAA ACTAAAGTGG
AGGCAGCGTG CAGTGGAGTT GTGTCGTGTG CCGACATTGT CGCCATTGCT GCTCGTGATT CAGTCGTCCA AGTAATCATT ATTTCTTCTT TTCTATTGTC GATATATTTA ATTATGGCCA
AAGGCGTATG GACAATGGGT ATATTTAATT ATTTCTTCTT TTCTATTGTA GATATATTTA ATTATTGTCA AATATAATTA ATTATTGGAG TATGGAAAAT GGGTATATTT AGGTCGAAAG
GCGTACACCT ATTGACAATG GGCACATTTA ATAGGTTTnn nnnnnnnnnn nACCTAATCA TGTTTAAAAA TTACTGTGTT CACTAACTTA TTGCCAAGTC TCCCTGATTA AAAAATATTA
AGGTATTAAA ATGGTCGGCT GGCATCACCA ACGGTCACTC AAAGTTTAAC AACCAGCCGC CTTTCGGCCT TCACCAGTCG CTAGTTAGCG GCTGTGCTAG GTTAATGATC TTTTAACCAT
AAATTTCAAT CATAAGATTA TCAATTGAAG ATACTACAAT ATTTTTAGTT GTCCTTCCAA ATCAATGAAT AAGATGTCAT GTTAGCATTT TTAAAAGTTC TGTTAAGCTG TTTACTTTTT
CACATTTATT TAATATGATT ACTTTTTCAC ATTTATTTAA TATGATTAAG AAATTACTAT GTTAACCTGT TTACTTTTTA ATATTTACTT AATATGATTA AGAAATTACT ATGTAATCTG
AAGACATTCA GCATTACACC TACTCAATCC TTGTGAAAAG AGTTCTCCAC CCAATTCACA ACACTTATTC TTGCAAGCAT GGAGTTATGT CTTCTCCCTA CTGAGGTAGA AAGTGATTGT
TCTTTTAGTT TTCTTCTCCT ACAAAATGAT TTCACGGGAT TACTCGAGCA AAAGCGGTTG CGATCAGCCT ATGGTGATAG ACCAGTTCTG GAGGGATAGA GGTTGAGGGA GATGGGAAGA
CCCCATAATT GTAAATGGGA GATGGGAGAA GCATTGGTTT ATACATTTTT GTTGTTACTG ATGTTAGTGA TAATTTTTTT AGTTATTTTT TTGGAGAAGC ATATTTAATT GTCATTTCAA
ATGATTAACA AATTTAATTG AAATTATAAA TTTAATTTAT TATTAATTTT TTATCATTTT ACAATAAGTC AGAATTTTAA GAATAGTAAG CCTTTCTAGA TTTACCATCA ACGACTTAAC
TGCTGTGCTA GTTATATTTA ACTATTCTTA AATAGAATAG CTCATCTCCT GCTAGTTCAG GGTTGTTTAA CTATTATGTT GTTGGACATT TCGTACTTTT GTGTCAGTAA TTATCCTCTC
TGAACTAGAG ACAGTATTCT ACTCCTATCC TAATTTACTA AAAATTGTCA TTTAGAATGA TAGAACTTTT TTTATGAAAG ACTTTTAATT TGCCACAACA TTTTCAAAAA AATTAGCCCT
CTCAAGATTT GGAATCAAAT AATGTTATTT GCAATTCGTT AGCTGGGTGG CCGAACATGG ACGGTACTGC TGGGAAGGCG AGACTCAACG ACTGCAAGTT TAAGCACTGC AAACACCAAC
CTTCCGTCAC CAGCTTCCAC TCTCAGCGCA CTCATGACAG CATTTCAAGC TCAGAATCTT TCTACGAAGG ACCTTGTCGC ACTCTCAGGT ATAATATTAT TCATTTAGCA ACATTCTTCA
ACCTTTCGCA CTGATCCAAA TGTATCAAAG GAATAATTAT CGTGCGCTCT TATTATCAAT GCAGGTGCTC ATACAATTGG CCAAGCACGG TGCACCACAT TCAGAAATCG CATCTACAAC
GATTCAAACA TTAATGCTTC ATTCGCCACT TCTGTGAAGG CAAACTGCCC AAGCACTGGT GGCGACGATA CCCTCTCCCC CTTAGATGTG CTTACTCCTA CCACATTTGA CAACAAGTAT
TACAGTAATC TGAAAAGCCA AAAGGGACTT Tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnC AGCAGCCATG GTGAATATGG
GTAATATCAG TCCCCTCACT GGCACCAGCG GAGAAATCCG CACAAACTGC AGGAAGGCCA ATTAGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGATGAGGT CTCTCGTATG CATTTCTGTA ATAGCATTTG TATGCTCCAT TAATAACGCT GTGCATGGGC AACTGAGCTC AACGTTTTAT TCCACGTCGT GTCCGACGGT GCTGTCAGTC
GTGAAAGCCG CGGTGAAGCA AGCAGTCGCC AGCGAGAAAA GGATGGGGGC GTCCTTGGTC CGCCTTCACT TCCACGACTG CTTCGTTAAT GGGTGTGATG GTTCGGTGTT GTTGGACGAC
AACTCGACGT TTACAGGAGA AAAGACTGCA GGACCGAATA ACAATTCCCT GAGAGGATTC GACGTAATCG ACACCATCAA AACTAAAGTG GAGGCAGCGT GCAGTGGAGT TGTGTCGTGT
GCCGACATTG TCGCCATTGC TGCTCGTGAT TCAGTCGTCC AACTGGGTGG CCGAACATGG ACGGTACTGC TGGGAAGGCG AGACTCAACG ACTGCAAGTT TAAGCACTGC AAACACCAAC
CTTCCGTCAC CAGCTTCCAC TCTCAGCGCA CTCATGACAG CATTTCAAGC TCAGAATCTT TCTACGAAGG ACCTTGTCGC ACTCTCAGGT GCTCATACAA TTGGCCAAGC ACGGTGCACC
ACATTCAGAA ATCGCATCTA CAACGATTCA AACATTAATG CTTCATTCGC CACTTCTGTG AAGGCAAACT GCCCAAGCAC TGGTGGCGAC GATACCCTCT CCCCCTTAGA TGTGCTTACT
CCTACCACAT TTGACAACAA GTATTACAGT AATCTGAAAA GCCAAAAGGG ACTTTTCCAC TCCGACCAGG AGCTATTTAA TGGAGGTTCT ACAGACTCTC AAGTTACTAC CTACAGCAAC
AATCAGAACA CCTTCTTTAC TGACTTCGCA ACCGCCATGG TGAATATGGG TAATATCAGT CCCCTCACTG GCACCAGCGG AGAAATCCGC ACAAACTGCA GGAAGGCCAA TTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CACCGTCCTC CCAACATTCC ATCCCTTCAA TTCCGCTCCG TTCTTCTATT CTTTGAAGCG GGCAGCTTCT TCTAAATATG ATGAGGTCTC TCGTATGCAT TTCTGTAATA GCATTTGTAT
GCTCCATTAA TAACGCTGTG CATGGGCAAC TGAGCTCAAC GTTTTATTCC ACGTCGTGTC CGACGGTGCT GTCAGTCGTG AAAGCCGCGG TGAAGCAAGC AGTCGCCAGC GAGAAAAGGA
TGGGGGCGTC CTTGGTCCGC CTTCACTTCC ACGACTGCTT CGTTAATGGG TGTGATGGTT CGGTGTTGTT GGACGACAAC TCGACGTTTA CAGGAGAAAA GACTGCAGGA CCGAATAACA
ATTCCCTGAG AGGATTCGAC GTAATCGACA CCATCAAAAC TAAAGTGGAG GCAGCGTGCA GTGGAGTTGT GTCGTGTGCC GACATTGTCG CCATTGCTGC TCGTGATTCA GTCGTCCAAC
TGGGTGGCCG AACATGGACG GTACTGCTGG GAAGGCGAGA CTCAACGACT GCAAGTTTAA GCACTGCAAA CACCAACCTT CCGTCACCAG CTTCCACTCT CAGCGCACTC ATGACAGCAT
TTCAAGCTCA GAATCTTTCT ACGAAGGACC TTGTCGCACT CTCAGGTGCT CATACAATTG GCCAAGCACG GTGCACCACA TTCAGAAATC GCATCTACAA CGATTCAAAC ATTAATGCTT
CATTCGCCAC TTCTGTGAAG GCAAACTGCC CAAGCACTGG TGGCGACGAT ACCCTCTCCC CCTTAGATGT GCTTACTCCT ACCACATTTG ACAACAAGTA TTACAGTAAT CTGAAAAGCC
AAAAGGGACT TTTCCACTCC GACCAGGAGC TATTTAATGG AGGTTCTACA GACTCTCAAG TTACTACCTA CAGCAACAAT CAGAACACCT TCTTTACTGA CTTCGCAACC GCCATGGTGA
ATATGGGTAA TATCAGTCCC CTCACTGGCA CCAGCGGAGA AATCCGCACA AACTGCAGGA AGGCCAATTA GAATTTCTGA AGAATGTATT CTCTATATGT TTTTTCAGCG AAGCTTTACA
AGAAAGAAAT AAACTGCAGT TTAATTTATG CGGTCATGTT AAAGTTAAAT GCAATTTCAG ACAGCACGTG AAATATTTGA TATAGACCGC TGTCGAGTAC GCTGTGGATA AGGATCAGCT
ATATATGATT AGGATGATTA AGGACATGAC ACGTGTGAAT GCAATTCGTA TCATTTATAA CTAATTACTA TCTCTTTAGG TTACTGAATT TTATAATAGT AAGAGCCTTG TAAAACTAAC
TGTCAG
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Retrieve as FASTA
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