Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
329 (306) |
| PWM (Da): |
34409.93 (32110.6) |
Transmb domain: |
i7-26o |
| PI (pH): |
4.5 (4.44) |
Peptide Signal: |
cut: 24 range:24-329 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGATSMFGII KLLVVISVGL VLGSSFSEGG LQTGFYSSTC PTAESVVLST VQQSVQADPT LAAGLLRLHY HDCFVQGCDA SILIAGASAE QTASGHSGLR GFDVIENAKK QLERICPGVV
SCADIVALAA RDAVALSNGP NYDVPTGRRD GMRSSAGDAS DMPDPTDSVD VLKRKFAAKG LSASDLVVLN GAHTIGTTAC FFIEDRLYNF AADGDADPSI NPEYLTELRS TCPKGGDVNT
RLALDRGSEF QFDKEFLENM REGNVALQSD SSMYQDGSTR GYIDSYFGLL GGLLGPSFES DFADAIVKMG QVGVKTGSNG KIRTVCSAF
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic, EST and RNA seq. Incorrect prediction (exon 1 and start of exon 2 are missing due to scaffold border). Sequence completed (stop in frame, start is missing and mismatches between EST and DNA for the 5' end) |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTCGTGATTA GTGTTGGCTT GGTCTTGGGT TCGAATTTCA GTGAGGGTAG TTTACAAATG GGATTTTACT CTTCGACTTG TCCCACAGCA GAATCTGTGG TGCTCTCGAC CATTTAGCAG
AGTGTCCAAG CCGATCCAAC TCTAGCGGTA GGGCTTCTGC ATTTACATGA CCATGACTGT TTCGTTCAAG GTTGCGATGC ATCAATCCTG ATTGTCGGTG CTAGTGTTGA ACAAACGATG
CCGAGCCATT TCAGATTGCA GGGCTTTGAT GTCATAGAAA ATGCCAAGAA ACAACTCGAG AGAATCTGTC CCAGAGTCAT TTCCTACACC GACATCGTTG CATTGGCAGC CATAGATGCC
GTAGCACTGA GTAACGGACC CAACTATGAT GTACCCACTA GACGAAGAGA TGGAATGAGG TCGTCTATTG GGGACGCTTC AGACATGCCA GACCCTACGG ATTCAGTCGA TGTCCTCAAG
CGTAAATTTG CTGCAAAGGG TCTATCTGCA TCAGATCTTG TTGTTCTCAA TGGTAGGTCT ATATCATTCT TCAATTCAGT TACATAGATT AATGGCTAGA TATCCACTAG ATCTGTTATA
CATTTCCTAA AATGTGCTTT AGGATTGTTA GCATAATAAT GATAATATAT TTAATCGAAT AGAAAGTAAA AACATTATTT ATGTTAGTGG AAAACCCTTT ATGATGTATA CGACAGAGTA
ACCCTGAAAA TACTATCAGC CTAGAACCTT GAAGGACACA ACTATCTATA CCTTAGGTTT TGGGTCTGAC TAGTAAAGCA AGGGTTTGGA TGCAAGGAAA GTTTGAACTA TTCAATATGC
GTTACCTGTC AGATTGAGGC CATGGGCAGA ATTTCTGTAT GTGGAATGCT ATAGTTCACA GAAATCTATT AGGTGAACAA TATCTACGGT GTTGTGTAGC ATTCAATGCT GTGAATGTTG
TGTAGAGTGG TCTCTATTGA ATGCATGTTG TGTAGGATGG TCTCTATTGT ATGAGGTGGT TTATAAGTTG TTGGATTTGA AAAAAATTCA AATCCAATGA CCTATACATC TGTAACAACC
CTAGTTGTAT TCATATTTCA CTTGTTTTAC TTTGGTAAAT TTGTTTTTAC ATTTTCAATT CGTATTGTTT nnnnnnnnnn AAGTTATGAA GAATAAATCA CATTCATTGA TTTGGGAGGA
CGACTAAGAA TATTCCAGCA TTTCTATTGT TAGTCATCAA ATTAAAATTT TAGATTAAAA AATGATTAAT TGTACCCATC TTCAATAGAT ATACACCTTT TGACATAACT TTCGAAGTAA
TAATATATTT AATCAAATAA AAAGTAAAAA CATTATTTGT TAGTGGCATA CCCTTTATGA TCTATACGAC AGATTAACCC TGAAAATACT ATCAGCCAGA ACCTTGAAGG ACACAACTAT
CTGTACCTTA GGTTTTGGGT CTGCCCAGTA AAGCAAGGCT CTGAATGCAA GGCAGGTTTG AACTATTCAA TATGCGTTAC CTGTCAGATT GAGACCATGG GCAGAATTTC TGTATGTGGA
ACGCTGTAGT TCACATAAAT CTATTAGGTG AACAATACCT AAGGTGCTGT GCAGCATTGA ATGCTGTGTA GGGTGGTCTC TATTGAATGA GGTGGTTTAC AAGTTGTTGA ATTGAATGCT
GTGTAGGGTG GTCTCTATTG TATAAGGTGG TTTATAAGTT GTTGGATTTG AAAACAATTC AAATCCAATG ACCTATACAT CATCCCCACA ACATATTCCT ATACATCATC CCCACAGCAT
ATTCCACAGC CTTTATATCT AACCCATCCC CACAGCATAT TCCTATACAT CATCCCTACA GCATATTCCA CAGCCTTTAT ATCAAACCCA TCCCCACAGC ATATTCCTAT ACATCATCCC
CACAGCATAT TCCACAGCCT TTAAGCTGTT GAATTGAAAA CAATTAAAAT CCTATAACCT ACATCATCCC CGCAGCATAT TCGACAACTT ACACACCACC CCACTCAGCA TTGAACCCTG
ATATTGACTG CTGTTGAATT TGAAAGCAAT TCAAACTCTA CAACCTACAT CATCCCCACA GCATATTCGA CAGCCTACAC ACCACCCTAC TCAGCATTAA ACCCTGCAGA GCAAGGTGGA
TGTTGGCTGC CAATTTATAA GAACCAGTCA ACGCTGTATT AATTGCAGTC AATGCTGTAT TAATTGCAAT TTTGAAGGGA CAGGTACTGT AGGTTGGAAC AGTTCCCGCC AATCCATCAA
ACCTGTCCGT CATCAAACCT GTCAGTTTAA GGTTATGGAT ATGATAAAAA CAGGGTTGGC AGGCAGGTTG AAAAGGGGCA ATGGCTATCC ATCATGTAGA CTCTGCATGG TGGATAGCAA
TTCCGGTTGA ACTGATTCCA ACGTGCATTG CCCATCACTT CATATGTGGA GAGCAGTTAC TTACACAATG GATAAGCACC GAGCAACTCT GTGCTGATTG CAATGTACAT TGATATATAT
ACGGACCTAG TCTGAGATGC TTCAGATATT ATGGTACATA TCCTGGTATA GTCTGAGCTG ATTGAAATGT ACATTGATAT ATATACAATT TGCATTGATA TATATATACG ATCCTAGTCT
GAGATGCTTC AGATATTATG GTACATATTC TGGTATAGTC TGAGCTGATT AAAATGTGCA TTGATATATA TACGGTCCTA GTCTGAGATG CTTCAGATAT TATGGTACAT ATCCTGGTAT
AGTCTGAGCT GATTGAAATG TACATTGATA TATATACAAT TTGCATTGAT ATATATACGA TCCTAGTCTG AGATGCTTCA GATATTATTG TACATATTCT GGTATAGTCT GAGCTGATTA
AAATGTACAT TGATATATAT ACGATCCTAG TCTGAGATGC TTCAGATATT ATGGTACATA TCCTTGGATA GTCTTGAGCT GCTTCCGATA TTATGGTACA TATCCAATGC AACATAGCTG
GGTGTATAAT GCTTGCCCCA ATCCACCTGT TATAATGAAG TTGTATAGTC TTGAGCTGCT TCAGATATTA TGGTACATAC CCTGGTTGTA TAATGCTTGT CCCGATCCAC CTGGTATAAT
GAAGCAGTCT AATCATGTAT AGCAAACATC TTCTTTGGGT AGTTTGACTG AATCAAGACA ATGAACAATT GCAATTCTGA CAATGAGACT GTAGTTGGAT TCATCAATCC CATTTTCATT
GAATAACTCT AGTCTTCAAC TTTAGCAATC TAAACTTGAG ATCTATTCTT CAAGTTTAGC AATCTAAACT CGAGATTTGA AAATTTCAAT GAAATATAAG AAGAAAAGAC ACCGAAACAG
AAAATGTTTG CTATGTTATA CATTATTAGC TTATTCTCAA ATGATCTTTA AGGCATTGTA AACAGTTGTA AAGCCTGTAA AATTTTCAGT GGCTTAACTT CCACTTCCAT TTACTACAAG
GTAGATTCAT AACTCTTTAA GTCGGAGTAA ACACTGAAAA TTTTATATGA TCTATAGGAC AGAGTAACAG TTGTAAAGTC CGTACAATAA TTTTCGGGAG TTTCAACTTT CATTTATTGC
AAGGTTGTCT CTACCATTTA CTAGTTTAAC GTACATATAT TTCAAGGTAG GTATATAATG CTTGCCGTAA TCCCACATTT TATGATCTAT AGGACAGAGT TGTCTCTACC ATTTACTAGT
TTAACGTACA TTTATGTCAA GGTTGTGAAG GGTCACTTTC ATTTTTGTCA ATGTTGTTTG TATAAATTGT CTGTACTGGT TATATGTTTT TGGTTTTATC AATATTTAGT GTTTTGTATG
TTAAAATATA TATTGTTTAA TAAAACATAT ATAGCATATA TTTGTTGCTA CTAGTCTATA TTGTTTGTTT GTCATATTCG AAATTATTAT TTTTTGTTGT TTAAAATTTA TTTTGGAATG
TAAAAATGGA TTTAGCATAG TGAAAAACTT CTGCAACATT CAATTATATA GAAATAATCA CTCAAATTTG TGGATCTAAC AATTTCTTAC CAAATTATGA ATAAATGTCC CTTGAAAAAT
GACTGGAGAA AAATCGTTTA ATAGAACTTT AAACTACCAC TTTGTCTAGC CATAATTATC TTATTTTTTT AATGTTTTAG ATATCCTAAA CCTGTTTCAA ACCCAACTAA CGAAGTAAGC
TAGCATCCCA TGGCCCTCAA GTATAGATGC TCTTCTCCGT TCATGCTCTT TTCCTGTGCT AGTGGATGAG AGTTTAGCTT GAACCGCTAT TTTCTTTGAC AAGTTTTGTT GTCCTTCCAA
TGTTTCACAC ATCGATAAAT TTCTCATTTT CTTCAACGAT CTTGTTTATT ATTATTTTAC CAAAATCAGA AATGGCTAAT GGATTACGAA TATGAGCAGA ATGTAGTGTT TTTTTGGCAG
GAGCACACAC GATCGGAACA ACTGCATGTT TCTTTATCGA GGACCGTCTC TACAACTTCG CAGCCGATGG CGACGCAGAT CCCTCTATCA ATCCCGAATA CTTGACGGAA CTGAGATCAA
CTTGCCCCAA GGGCGGTGAT GTTAATACGA GGTTGGCTCT TGACAGGGGC TCCGAATTCC AATTTGACAA GGAATTCCTA GAAAACATGA GGGAGGGGAA CGTAGCGCTA CAGTCTGATT
CGAGCATGTA CCAAGACGGT TCTACCCGCG GATATATCGA CTCCTATTTT GGGCTGCTGG GCGGGCTTTT GGGGCCTTCA TTTGAATCCG ACTTTGCAGA TGCAATTGTT AAAATGGGGC
AGGTCGGCGT CAAAACCGGT TCGAATGGAA AGATTCGTAC CGTCTGTTCG GCCTTTTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGAGCAA CAAGTATGTT TGGGATTATA AAGCTTTTAG TCGTTATTAG TGTCGGCTTG GTCTTGGGTT CGAGTTTCAG TGAGGGCGGC TTACAAACGG GATTTTACTC TTCGACTTGT
CCCACAGCAG AATCCGTGGT GCTCTCGACC GTGCAGCAGA GCGTCCAAGC CGATCCAACT CTAGCGGCAG GGCTTCTGCG TTTACACTAC CATGACTGTT TCGTTCAGGG TTGCGATGCA
TCAATCCTGA TTGCCGGTGC CAGTGCTGAA CAAACGGCGT CGGGCCATTC CGGATTGCGG GGCTTTGATG TCATAGAAAA TGCCAAGAAA CAGCTCGAGA GAATCTGTCC CGGAGTCGTT
TCCTGCGCCG ACATCGTTGC ATTGGCAGCC AGAGATGCCG TAGCACTGAG TAACGGACCC AACTATGATG TACCCACTGG ACGAAGAGAT GGAATGAGGT CGTCTGCTGG GGACGCTTCG
GACATGCCAG ACCCTACGGA TTCAGTCGAT GTCCTCAAGC GTAAATTTGC TGCAAAGGGT CTATCTGCAT CAGATCTTGT TGTTCTCAAT GGAGCACACA CGATCGGAAC AACTGCATGT
TTCTTTATCG AGGACCGTCT CTACAACTTC GCAGCCGATG GCGACGCAGA TCCCTCTATC AATCCCGAAT ACTTGACGGA ACTGAGATCA ACTTGCCCTA AGGGCGGTGA TGTTAATACG
AGGTTGGCTC TTGACAGGGG CTCCGAATTC CAATTTGACA AGGAATTCCT AGAAAACATG AGGGAGGGGA ACGTAGCCCT ACAGTCTGAT TCGAGCATGT ACCAAGACGG TTCTACCCGC
GGATATATCG ACTCCTATTT TGGGCTGCTG GGCGGGCTTT TGGGGCCTTC ATTTGAATCC GACTTTGCAG ATGCAATTGT TAAAATGGGG CAGGTCGGCG TCAAAACCGG TTCGAATGGA
AAGATTCGTA CCGTCTGTTC AGCCTTTTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GACAGCTTAC AGTCAAGAAA AAGCGTGATA ATGCAATATT TGACTACGTA AAATGCCAGT GGACACTTTC TCAGATAAGT CCCGTCTCAT TACCTGTCGA TGCACGGATT TTATTGTTTT
TTGCAGTCAA TATGGCAGAG CTTCGGCCAG TGCGTACTAG TTTATTATTT AATTAGAGTG GGTTTATCAC TGGAGATTGT ATCGTTTGTT TGATATAAGG GAGCGCAATG GGAGCAACAA
GTATGTTTGG GATTATAAAG CTTTTAGTCG TTATTAGTGT CGGCTTGGTC TTGGGTTCGA GTTTCAGTGA GGGCGGCTTA CAAACGGGAT TTTACTCTTC GACTTGTCCC ACAGCAGAAT
CCGTGGTGCT CTCGACCGTG CAGCAGAGCG TCCAAGCCGA TCCAACTCTA GCGGCAGGGC TTCTGCGTTT ACACTACCAT GACTGTTTCG TTCAGGGTTG CGATGCATCA ATCCTGATTG
CCGGTGCCAG TGCTGAACAA ACGGCGTCGG GCCATTCCGG ATTGCGGGGC TTTGATGTCA TAGAAAATGC CAAGAAACAG CTCGAGAGAA TCTGTCCCGG AGTCGTTTCC TGCGCCGACA
TCGTTGCATT GGCAGCCAGA GATGCCGTAG CACTGAGTAA CGGACCCAAC TATGATGTAC CCACTGGACG AAGAGATGGA ATGAGGTCGT CTGCTGGGGA CGCTTCGGAC ATGCCAGACC
CTACGGATTC AGTCGATGTC CTCAAGCGTA AATTTGCTGC AAAGGGTCTA TCTGCATCAG ATCTTGTTGT TCTCAATGGA GCACACACGA TCGGAACAAC TGCATGTTTC TTTATCGAGG
ACCGTCTCTA CAACTTCGCA GCCGATGGCG ACGCAGATCC CTCTATCAAT CCCGAATACT TGACGGAACT GAGATCAACT TGCCCTAAGG GCGGTGATGT TAATACGAGG TTGGCTCTTG
ACAGGGGCTC CGAATTCCAA TTTGACAAGG AATTCCTAGA AAACATGAGG GAGGGGAACG TAGCCCTACA GTCTGATTCG AGCATGTACC AAGACGGTTC TACCCGCGGA TATATCGACT
CCTATTTTGG GCTGCTGGGC GGGCTTTTGG GGCCTTCATT TGAATCCGAC TTTGCAGATG CAATTGTTAA AATGGGGCAG GTCGGCGTCA AAACCGGTTC GAATGGAAAG ATTCGTACCG
TCTGTTCAGC CTTTTAGTAG TAGCCGCAGT CGATAATTGC AACGTTGATT TTGCTGTTTT CAAAATTGTA AAAGGAAGTT TATAGTATAA GCTAGATATA TTAAAAAATT TCTTTCGCCT
GTGGAATAAA CGAGGCCCGA GGCTGAGGCC ACGTTGCATG TATCGAGAAT AAGATTGTTA TCGTCATTGT GATGATAAGG TAAAGCTGTA ATCTTATCTT CTTCGAGCAC ATAAAACAAT
AATAGAATAT A
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Retrieve as FASTA
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