1. Browse the Database
  2. View Redoxidase
Entry information : PabPrx58(PAB00010113 / MA_10430613g0010)
Entry ID 12791
Creation 2013-12-19 (Qiang Li)
Last sequence changes 2013-12-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-05-14 (Christophe Dunand)
Peroxidase information: PabPrx58(PAB00010113 / MA_10430613g0010)
Name PabPrx58(PAB00010113 / MA_10430613g0010)
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea abies (Norway spruce)    [TaxId: 3329 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PabPrx58
start..stop		 S start..stop
PtaPrx88 665 0 1..351 1..351
PabPrx03 662 0 1..351 1..351
PtaPrx48 658 0 1..351 1..351
PtaPrx07 602 0 5..351 1..347
Literature and cross-references PabPrx58(PAB00010113 / MA_10430613g0010)
Protein sequence: PabPrx58(PAB00010113 / MA_10430613g0010)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   351 (329)
PWM (Da):   %s   38022.82 (35706.6)  
PI (pH):   %s   5.3 (4.87) Peptide Signal:   %s   cut: 23 range:23-351
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKHITPLAS VILCMFVIYG GAVNSQPTPV AGLSWTFYST SCPSLESIVW QRMGAYLSAD ITQAAGLLRL HFHDCFVQGC DGSVLLNSTS GEQTATPNLS LRAQALKIIN DIKENVEAAC  SGIVSCADIL ALTARDSVVM AGGPFYPIPF GRRDSLTFAN LSTTLANLPS PTFNVTGLIN VLGPKGLNFT DLVALSGGHT IGRSNCSSFQ NRLYNSTTGI SMQDSTLDQS FAKNLYLTCP 
TNTTVNTTNL DIRTPNLFDN KYYVDLLNRQ TLFTSDQSLY SDTRTRDIVK NFAVNQSLFF EQFVLSMLKM GQLDVLTGSE GEIRKNCWAS NPSTYSIMDP EASQESSSYS M 

Retrieve as FASTA  
Remarks Complete sequence from genomic, RNA seq (isotig08548, comp94063_c0_seq1). Incorrect prediction, PAB00010113 contains two ORFs . Start of exon 1 is missing due to NN..
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTCCTTGGAG TCGATAGTGT GGCAGCGAAT GGGAGCCTAT TTGAGTGCAG ACATTACGCA GGCTGCAGGA TTGTTAAGGC TCCACTTCCA CGACTGCTTC GTTCAGGTAT AACTATTGTC  AATGTCAGCG TTGTTGACAG TTGCCTGTTC CTGTTTTTCT GATATTGATG TTCGACCAGT TCCATTTTTC CTATTTTATC AAGTTAAGTC TATTAATTTT AAGAAGAATA AAAGGAAATT  GAGATAGAAA ATTCTTAAGA TTAAAATTTT TTAGACCAAC TTAAGATTTA TTAGACGTTT TGAAAATTAA GAAGAGTAAA ATGAAATTAC AAGAATAAAA AGAAATCGAG ATAAAAATCT  CTGAGACACT GAAATGCCTC AATTGGTTAG GTGGGGAAGC TTATCCTCAA TTAGATGGGA GATGGGTGGG TAATTGATAT TATAATGGCT TAATGTTTAT TGTTGAGTGG TTTTGTTTGG  ATTTACCTTA GATATCATCT TAAAAATGAG GATAAATGTT TTACCAATTT TTGATTAAGA ATATGTGCTT TTTCTTTGAG CATTTGAACA TTATAGTTTC AAATCCAAAA AGAATAAAAT  ATATATAATA TATTTGAATC AAACCTCTGA CTCTGTAAAT GTAAAATTAC CCTCACAATA TAAATACAGA ACTCTTGTTT TGCTGCGAGA GAAGATGTTG AACCTTTTAT TTCTTCAATA  AAATCAACTA TGAACACTAA AACACCATGC TCAATGTTCA TCTTCCTTTG TACACGAGGG TTTTACTCTG ACCTAAATTT ATATTTAAAT TAATCCCAAC CACCAACCAA GTATGGCTGG  TATTTAATAC ATCTTATTGG TTACAGGGAT GCGACGGGTC GGTGTTGTTG AACTCAACGT CGGGTGAGCA AACAGCTACC CCAAACTTAT CACTGAGAGC GCAGGCTTTG AAGATTATCA  ACGACATCAA AGAGAACGTA GAAGCCGCCT GCAGCGGAAT TGTGTCGTGT GCCGACATTC TTGCCTTAAC GGCCCGTGAC TCCGTTGTGA TGGTAACTAA TTTCATTTCT CTGCTGACAT  TGCCGTCAAG ATTAATTTTA TTTGTCTGTA ATTAATGCTT GGGATGCATT TGATTAATAT GTGTTTTGGT GAAGGCTGGA GGGCCGTTCT ATCCCATACC ATTCGGCCGC AGGGACAGCC  TTACTTTCGC CAATTTATCG ACCACTCTCG CCAATTTGCC ATCTCCAACC TTCAATGTAA CGGGGCTCAT CAATGTTTTG GGTCCCAAAG GTTTGAATTT CACAGATCTG GTGGCCCTCT  CAGGTACTAT TACCTTATCA ACAACTTTCC CTTTTCTTTT CTATTCTTTG GGGGGTTTGC AATGCTCATG ATAAACTCTG TGTATTGATT TGGGTGCAAT ATTATTATTA TTGTGTGTGA  TCAGGAGGAC ACACAATTGG CAGAAGCAAC TGTTCATCCT TCCAAAACAG ACTATATAAC AGCACCACTG GTATAAGTAT GCAGGATTCC ACTCTGGACC AGAGCTTCGC TAAGAATCTT  TACCTCACCT GCCCTACCAA TACCACCGTT AACACCACCA ACTTGGATAT TCGCACTCCA AATTTGTTCG ACAACAAATA CTACGTCGAT CTCCTCAACA GACAGACCCT CTTCACGTCT  GACCAGAGTC TTTACAGCGA CACTCGAACC CGCGACATTG TCAAGAACTT TGCGGTGAAT CAGAGCCTCT TCTTTGAACA GTTTGTTCTC AGCATGCTCA AAATGGGTCA GCTCGATGTT  CTCACAGGAA GCGAGGGAGA GATCCGTAAA AACTGCTGGG CTTCTAATCC TTCAACATAC TCTATTATGG ATCCAGAGGC GTCTCAAGAA TCGTCATCTT ACTCTATGTA AGATTAGGCT 
TATTAG 

Retrieve as FASTA