View Redoxidase 12855

Entry information : AeuGPx03_201684 ( g2077.t1 / Ae201684_2077.1)

Entry ID	12855
Creation	2014-02-19 (Christophe Dunand)
Last sequence changes	2016-02-17 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2016-02-17 (Achraf Jemmat)

Peroxidase information: AeuGPx03_201684 ( g2077.t1 / Ae201684_2077.1)

Name (synonym)

AeuGPx03_201684 ( g2077.t1 / Ae201684_2077.1)

Class

Other glutathione peroxidase [Orthogroup: Gpx4001]

Taxonomy

Eukaryota Saprolegniaceae Aphanomyces

Organism

Aphanomyces euteiches [TaxId: 100861 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AeuGPx03_201684 start..stop	S start..stop
AeuGPx02_201684	186	3.38e-61	3..156	25..185
PsojGPx03	172	1.64e-54	1..156	124..284
AlaiGPx01	178	2.57e-54	1..156	327..487
PiGPx03	169	1.82e-53	1..156	124..284

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12855' 'join(334930..335403)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	334930..335403	472
join(334930..335403)

Literature and cross-references AeuGPx03_201684 ( g2077.t1 / Ae201684_2077.1)

Cluster/Prediction ref.	AphanoDB: 212848

Protein sequence: AeuGPx03_201684 ( g2077.t1 / Ae201684_2077.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	157
PWM (Da):	17749.97
PI (pH):	8.06

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MASFFELTCT SMDGETVSME KYRGYVCLVV NVASKCGLTQ VNYTQLAALD KKYRDHGLRI LAFPSHQFAE QEFATHGEIQ QFVSTFGVTF PLFAKADVTG PNAQPIFEYL GTRLGAPKWN
FTKYLITRDG QPFKKYNPKI PPFDFESDIV SLLHSKL*

Retrieve as FASTA

Remarks

Complete sequence from genomic (no intron, scaffold4).

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCGAGCT TCTTCGAGCT AACATGCACG TCGATGGACG GCGAGACCGT GTCGATGGAG AAGTACCGTG GCTATGTATG TTTGGTTGTG AATGTTGCTT CCAAGTGCGG ACTCACGCAG GTAAATTACA CGCAATTGGC GGCCTTGGAC AAAAAGTACA GAGACCATGG CCTACGCATC CTCGCCTTCC CGTCCCACCA ATTCGCCGAG CAGGAGTTTG CCACGCATGG TGAAATCCAA CAATTCGTCT CGACGTTTGG AGTGACGTTT CCTCTCTTTG CGAAAGCGGA CGTGACGGGA CCCAATGCGC AACCGATCTT TGAGTACCTC GGCACACGTT TGGGCGCCCC CAAGTGGAAT
TTCACCAAGT ATCTCATCAC ACGAGATGGC CAGCCATTCA AGAAATACAA CCCGAAGATT CCTCCGTTTG ACTTTGAAAG CGATATTGTG TCTCTGTTGC ACTCTAAACT CTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA