View Redoxidase 12862

Entry information : Sdic2CysPrx01 (SDRG_04358T0)

Entry ID	12862
Creation	2014-02-26 (Christophe Dunand)
Last sequence changes	2014-02-26 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2014-03-17 (Christophe Dunand)

Peroxidase information: Sdic2CysPrx01 (SDRG_04358T0)

Name (synonym)

Sdic2CysPrx01 (SDRG_04358T0)

Class

Typical 2-Cysteine peroxiredoxin [Orthogroup: 2CysPrx001]

Taxonomy

Eukaryota Saprolegniaceae Saprolegnia

Organism

Saprolegnia diclina [TaxId: 112098 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	Sdic2CysPrx01 start..stop	S start..stop
Aeu2CysPrx01_201684	369	2.25e-130	1..269	1..280
Pi2CysPrx01	315	1.69e-107	29..269	32..262
Hpar2CysPrx01	306	6.83e-104	9..269	16..263
Xt2CysPrx02	253	1.53e-85	74..265	11..202

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '12862' 'complement(join(964289..965098))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	964289..965098	808
complement(join(964289..965098))

Literature and cross-references Sdic2CysPrx01 (SDRG_04358T0)

DNA ref.	GenBank: JH767141.1 (965098..964289)

Protein sequence: Sdic2CysPrx01 (SDRG_04358T0)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	269
PWM (Da):	29971.07	Transmb domain:	i5-27o
PI (pH):	4.92

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MQHLRSTVLR AARHQLRRPI AARALPARAT SFVPSMMNVR GFANFAADDE EEFDYNGFDF GDDEDEDDKV KYPAQKAFVG QVAPSFTAPA VIRGDIDELS LESYRGKYVV LFFYPKDFTY VCPTEIIAFN DRAAEFEALD TQLICASIDS PEVHLAWTRL PRNVGGLGKM KIPMVSDLTK SIAAKYGCLK EDDGIAFRGL YVIDREGVVQ NITINNLPVG RSVDEVLRLV KAFQFNEEHG
EVCPANWQPG QATIQANPND AQKFFKNVK

Retrieve as FASTA

Remarks

Complete sequence from genomic (no intron).

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGCAGCACC TCCGCTCGAC CGTGCTCCGC GCCGCCCGCC ACCAGCTTCG CCGCCCCATC GCCGCCCGCG CCCTCCCGGC CCGTGCGACG TCCTTCGTCC CGAGCATGAT GAACGTGCGT GGCTTTGCCA ACTTTGCCGC GGACGATGAG GAAGAGTTTG ACTACAACGG CTTTGACTTT GGCGACGACG AAGACGAGGA CGATAAGGTC AAGTACCCCG CCCAGAAGGC CTTCGTGGGC CAGGTCGCGC CCTCGTTCAC GGCGCCGGCG GTCATCCGCG GCGACATTGA CGAGCTCTCG CTCGAGAGCT ACCGCGGCAA GTACGTCGTG CTCTTCTTCT ACCCCAAGGA CTTTACGTAC GTGTGCCCGA CCGAAATCAT TGCGTTCAAC GACCGCGCCG CCGAATTTGA GGCGCTCGAC ACGCAGCTCA TCTGCGCGTC GATCGACTCG CCCGAAGTGC ACTTGGCGTG GACGCGCCTC CCGCGCAACG TCGGCGGCCT CGGCAAGATG AAGATCCCGA TGGTGTCGGA CTTGACCAAG TCGATCGCTG CCAAGTACGG CTGCCTCAAG GAAGACGACG GCATTGCGTT CCGCGGCCTG TACGTCATTG ACCGTGAAGG TGTCGTCCAG AACATCACGA TCAACAACCT CCCGGTCGGT CGCTCGGTCG ACGAAGTCCT CCGCCTTGTC AAGGCCTTCC AGTTCAACGA AGAACACGGC
GAGGTGTGCC CGGCCAACTG GCAGCCCGGC CAGGCCACGA TCCAGGCCAA CCCCAACGAC GCGCAAAAGT TCTTCAAGAA CGTCAAGTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA