Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
338 (314) |
| PWM (Da): |
36950.55 (34270.2) |
Transmb domain: |
i7-29o |
| PI (pH): |
5.41 (6.04) |
Peptide Signal: |
cut: 25 range:25-338 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASLTSLLLV SSLFLSSFFC VSEAQSSAPV VQGLSWNFYE SSCPKVDDIV RKQLKKVFKA DIGQAAGLLR LHFHDCFVQC DGSVLLEGSA SGPSEQDAPP NLSLRAKAFE IINDLRDRVH
KKCGRVVSCS DIVALAARDS VFLWIKDGLN FATQNATLAN LPGPTSNTTK LLTDLAKKNL DATDVVALSG GHTIGLSHCS SFTGRLYPTQ DATMDKTFAN DLKTVCPASD TNATVPQDIR
TPDIFDNKYY VDLMNRQGLF TSDQDLYTDK RTKEIVKSFA VNQTLFFEQF VKSMIKMGQL SVLTGSKGEI RADCSVRNSD NANYLASVVE DDESLSEF*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (introns 1 and 2) and 54 ESTs. Incorrect prediction from Phytozome (incorrect intron 2) confirmed with ESTs |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAT TAACCTCTCT GCTTCTGGTT TCATCTCTTT TCCTTTCTTC CTTCTTTTGT GTCTCGGAGG CACAGTCCTC TGCCCCCGTG GTTCAAGGAC TTTCATGGAA CTTCTATGAG
TCTAGCTGCC CTAAGGTTGA CGACATAGTC CGAAAGCAGC TTAAGAAAGT CTTCAAAGCG GACATTGGCC AAGCTGCTGG CTTGCTCCGT CTCCATTTCC ACGATTGTTT TGTTCAGGTA
ACATTTAGCA AAGATTATAC AGTTTTTGGT TCAGTGTCGA TTTTGAGAGC TATTATCGGC CCTTTAGTTT CACGATTGCT TTGTGTCAGC TGTTTTATTG TCTTTAGCGG TAACTAAGGT
TTTATTCCTT GAAGTTTATC CAACTTTTTG TATACTATGA TATTCTACTT TTAGAGATAA TTAAATTATT ATATAGTACA ATGTCATTTG GTAAGCTTAA TGGGAGTAAT TTAAATTATT
TTAAAAAAAT TGAAAATATT CAAAGGTGCT TTCTGAAGAA CACATGGGTT TGTCCATAAA ATTTTATGAT TCGTAAATGT TTTCTCTTAT AAACGTAGTT GGAAGATAGT TAGAAATACT
TGTAACCATT TTAGAAGCCG TCACAGAAAA TATAAGATCG ACTAATTAAA TTGAGAAAAT GATTAATGCA GGGTTGTGAT GGATCTGTGT TGCTTGAGGG ATCAGCCAGC GGACCAAGTG
AGCAGGATGC ACCTCCCAAC CTAAGCTTGA GGGCGAAGGC CTTTGAGATC ATCAATGACC TCCGCGACCG CGTTCACAAG AAGTGTGGAA GGGTCGTCTC TTGTTCTGAT ATCGTCGCCC
TCGCTGCTAG GGATTCTGTT TTCCTGGTAA TTTTTATATT TATTGATTGC CTAAATATTA TTATTTTCAC GACAGCTTTA ATTATCTTTT TCTAAAGCTG AAATTGCACG GCAATAAACC
CTATTTTTCA AAGCTTTTGA CTAAACTAAA GTATGATTTA ATGGAAAGAT ATCATCATTT CTTAGAACTC GGATCAATGA TCTGACCTTT AAAATTGATC AAAACAGTCA AATTATTAGA
ACTTTTAAAT TTTTTTACTA ACTTTTCAAT TTTAACTTGA TAAATTTTAA AAACTCGGAT CACAGATCTT TGGACTTTAG AGAATCCTTT CCAATTGATA ACTTGACCAT AGTGATGGAT
GTGGATATTT CGTTCCACTG GAATACTTGC TTTTACGTAG GAAATTTCAT TGATGACTTT TCGCTCTTTT TTCTCTTCTT TAAATTACAA GAATGCTTTT AGATTTTTCC TTTTCATTTT
TTAATTAAAG GCGCGTTCCA ACCATACATA TTGATATGAG AAAGAATAAT GCTTGTATTC TTTCGTGAAA CATATTTGTT TTCTCACTTA TGGGTAATGC TTTTTAATTG TATGAACAAT
AAATTTGGAA TTGTTCATTC TCTTTATTAT CATCAAAAAT TCATATTTAT AAAAATTAGT CATTTATATC TATCAAACAA ATAGATAATT TATACCAAAT CCGTTCACTT ATTGATGCAT
ATGATTATTA ACCGATCTTC AAATTAAATA ATATTTTACA GATATAATTT TTAGATGATT GTAAAAATGT AAAATATTCG ATTATAAGGT TCGTACGGAG AGATAATTTC ATTATAAAGG
AGGGTTTCCG GGAAACACAT GCAAGAATTT GTGTGGTGCA GATGTTTTTG ACAGAAGCGG ATACCTTCCC TGTTGTCCTT ATCGAACAAC CAACTGCATT CAATGTTCTA AAATATCTTA
CCATAGATCC CAGGGAACTA TTACTCTACA TGGTTCAATA TAGTTGGCTG TAAGTGGATA AATGATAATC AATATCTGCA TGTTAGCAAT TTTCTGGACA TTTATACATC CCATGCCATA
AGAGGTAGAA AAACTTAGAT ACAACGGATT CCATCACAGG TGTCATGATC AAATTTATAT ATTTATTGTT TTATTGAACG GAACTTGATG TTGACGGTAA ACCTGTTCCG TATAAATTAT
TTTCATAAGA GAAAGATATC ACAATCCTGT ATGCTACTGT GACATTACTA AAGGCTGGTT TGGTATTGCT GTATTTTGAA AAAAAAGCTG CTTCTCTGTG TTGTGAGAAT AAACGGCTGT
GAAATAAAGC AGTAGAGTGT TTGTTAAATT TTTTTGTAAA AATGCTTTTG AAAAAAAAAG TAGTATTAAT GTGGTAAACT TTTATGTAAA ACAAATGTGA AAAAAATCGG TTTTTCAAAG
CTGATTTTGC AGCTTCTTGT TTTTGGTTTT TTTTTACCCA AAATTGTGAA AAAAAAACTG AAGCTGAATG TTTACCAAAC ACAAAAAAAC TCTCAGCTTT TTTTATACCA ACTTTTTTCA
GAATACTTTA GTACCAAACA AATCAGACCT AAGTAATACT ACAGTAGTTT ATACGATTGT TGAACTCTAG ATGATAAATG TGATATCATT GCCTAGTTAG ACTCCTTCCA AGTGTTACTT
ATCTTATGCT TTGATATAAA CATTTTTAAA TGATTTACCT TCATGGATCT CATCTCATGG GCATCTGAAT GAACTAGTTA ATTCATTTCC ATATCCCCAG TCCATGTGTT ATAATTTAAA
TTAAAAAGTG TTCCCGTTTG TGGAGTTGGT AGAACCTTTA ATATATCACA ACAATATAGA AATATAAGAG AATCAAGACA CATGATAATC TATTGCATAT TTTTCGTTTT TACATTTTCC
TCTAGCACAT GACTATCTGT TTTTTAATTG TTTTACTTGA CAAGTAGTTA GTAGCTTTAC TTAATTAATG TAGTAGTTGG AGTGGTGTTA CTTTTTCATA TTAATGTACG AACCACTGAA
GATGCCCACG ATTAGGAACA AGTAGAAATT GTTAAATCTT AAACAATGAC CAAGACATTC TCTTTGGCGT GTACACATAA AATTTTAGCA CTAATTAAAT CTCTAATATT CCGCCACTTA
GAGCATTTCG ATGCAATCCA ATTGATGTTA AAGAAAATGG GACAATCCAT TGAATTATCT AAGGGCTTTA AATGACAAGA ATTTAATACT CCAGAGTACT AAAATGTCAC TCGAAACTTT
TTGTTACATG ATTAAGCGTT TGTTTTGAAT ATTGTTGATG CAGTCAGGTG GCCCGGACTA TGATGTGCCC TTGGGAAGAA AGGATGGACT AAACTTTGCC ACACAAAATG CAACCCTAGC
AAACCTTCCC GGACCAACCA GTAACACAAC CAAGCTTCTA ACAGATCTTG CCAAGAAAAA CTTAGATGCC ACTGATGTTG TAGCCCTGTC TGGAGGTCAC ACCATTGGCC TCAGCCATTG
TTCCTCCTTC ACCGGCAGGC TCTATCCGAC GCAAGATGCT ACCATGGACA AAACCTTTGC AAATGACCTC AAAACAGTTT GCCCTGCAAG CGATACTAAC GCTACCGTCC CGCAAGATAT
CCGTACCCCT GACATATTCG ACAACAAGTA CTATGTTGAT CTCATGAACC GCCAAGGTTT ATTCACGTCG GACCAAGATT TGTACACCGA TAAGAGGACT AAGGAAATTG TGAAAAGCTT
TGCCGTTAAC CAGACCTTGT TCTTTGAGCA GTTTGTCAAG TCCATGATCA AGATGGGGCA ACTTAGCGTG TTGACTGGCT CCAAGGGCGA AATTCGTGCA GATTGCTCGG TCAGGAATTC
GGACAATGCT AACTACTTGG CCTCTGTGGT GGAAGATGAT GAGAGCTTGT CTGAGTTTTA A
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAT TAACCTCTCT GCTTCTGGTT TCATCTCTTT TCCTTTCTTC CTTCTTTTGT GTCTCGGAGG CACAGTCCTC TGCCCCCGTG GTTCAAGGAC TTTCATGGAA CTTCTATGAG
TCTAGCTGCC CTAAGGTTGA CGACATAGTC CGAAAGCAGC TTAAGAAAGT CTTCAAAGCG GACATTGGCC AAGCTGCTGG CTTGCTCCGT CTCCATTTCC ACGATTGTTT TGTTCAGTGT
GATGGATCTG TGTTGCTTGA GGGATCAGCC AGCGGACCAA GTGAGCAGGA TGCACCTCCC AACCTAAGCT TGAGGGCGAA GGCCTTTGAG ATCATCAATG ACCTCCGCGA CCGCGTTCAC
AAGAAGTGTG GAAGGGTCGT CTCTTGTTCT GATATCGTCG CCCTCGCTGC TAGGGATTCT GTTTTCCTGT GGATAAAGGA TGGACTAAAC TTTGCCACAC AAAATGCAAC CCTAGCAAAC
CTTCCCGGAC CAACCAGTAA CACAACCAAG CTTCTAACAG ATCTTGCCAA GAAAAACTTA GATGCCACTG ATGTTGTAGC CCTGTCTGGA GGTCACACCA TTGGCCTCAG CCATTGTTCC
TCCTTCACCG GCAGGCTCTA TCCGACGCAA GATGCTACCA TGGACAAAAC CTTTGCAAAT GACCTCAAAA CAGTTTGCCC TGCAAGCGAT ACTAACGCTA CCGTCCCGCA AGATATCCGT
ACCCCTGACA TATTCGACAA CAAGTACTAT GTTGATCTCA TGAACCGCCA AGGTTTATTC ACGTCGGACC AAGATTTGTA CACCGATAAG AGGACTAAGG AAATTGTGAA AAGCTTTGCC
GTTAACCAGA CCTTGTTCTT TGAGCAGTTT GTCAAGTCCA TGATCAAGAT GGGGCAACTT AGCGTGTTGA CTGGCTCCAA GGGCGAAATT CGTGCAGATT GCTCGGTCAG GAATTCGGAC
AATGCTAACT ACTTGGCCTC TGTGGTGGAA GATGATGAGA GCTTGTCTGA GTTTTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAT TAACCTCTCT GCTTCTGGTT TCATCTCTTT TCCTTTCTTC CTTCTTTTGT GTCTCGGAGG CACAGTCCTC TGCCCCCGTG GTTCAAGGAC TTTCATGGAA CTTCTATGAG
TCTAGCTGCC CTAAGGTTGA CGACATAGTC CGAAAGCAGC TTAAGAAAGT CTTCAAAGCG GACATTGGCC AAGCTGCTGG CTTGCTCCGT CTCCATTTCC ACGATTGTTT TGTTCAGTGT
GATGGATCTG TGTTGCTTGA GGGATCAGCC AGCGGACCAA GTGAGCAGGA TGCACCTCCC AACCTAAGCT TGAGGGCGAA GGCCTTTGAG ATCATCAATG ACCTCCGCGA CCGCGTTCAC
AAGAAGTGTG GAAGGGTCGT CTCTTGTTCT GATATCGTCG CCCTCGCTGC TAGGGATTCT GTTTTCCTGT GGATAAAGGA TGGACTAAAC TTTGCCACAC AAAATGCAAC CCTAGCAAAC
CTTCCCGGAC CAACCAGTAA CACAACCAAG CTTCTAACAG ATCTTGCCAA GAAAAACTTA GATGCCACTG ATGTTGTAGC CCTGTCTGGA GGTCACACCA TTGGCCTCAG CCATTGTTCC
TCCTTCACCG GCAGGCTCTA TCCGACGCAA GATGCTACCA TGGACAAAAC CTTTGCAAAT GACCTCAAAA CAGTTTGCCC TGCAAGCGAT ACTAACGCTA CCGTCCCGCA AGATATCCGT
ACCCCTGACA TATTCGACAA CAAGTACTAT GTTGATCTCA TGAACCGCCA AGGTTTATTC ACGTCGGACC AAGATTTGTA CACCGATAAG AGGACTAAGG AAATTGTGAA AAGCTTTGCC
GTTAACCAGA CCTTGTTCTT TGAGCAGTTT GTCAAGTCCA TGATCAAGAT GGGGCAACTT AGCGTGTTGA CTGGCTCCAA GGGCGAAATT CGTGCAGATT GCTCGGTCAG GAATTCGGAC
AATGCTAACT ACTTGGCCTC TGTGGTGGAA GATGATGAGA GCTTGTCTGA GTTTTAA
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Retrieve as FASTA
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