Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
375 (353) |
PWM (Da): |
38538.12 (36346.9) |
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PI (pH): |
8.55 (8.55) |
Peptide Signal: |
cut: 23 range:23-375 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASATFPALV LLMLVASASV FAQPGGGMGG GGGGGGCTGG GSGDCSGGGP GVNGGGMGGG GGPGSNSGGM TGMANPQGPG LSFSFYSESC PKAADIVAAR VYAAFKKDRG VPAPLLRLHF
HDCFVQGCDA SVLLDSTSNN KAEKDADPNA TLGAFDVIDD IKAHLEAECP GTVSCADILA LAAREGVHLA GGPLTEVPLG RRDGLTSFAL AAETFLPGST LNVSGLVHNF ATVGLDILDV
ATLSGAHTMG EARCVSLKNR LTQNDPTMNP EFAAYVKAKC GTSNISPKAM INNDYKTPSR FDNQYYKNLL ARAGLLTTDQ ALIYNRTTMR AVKVFAKKKS VFFKHFRRSV MKMGMITPLT
GSQGQIRSNC HRVNA
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Retrieve as FASTA
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Remarks |
Complete sequence from RNA seq |
CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGTCGG CGACATTCCC AGCGCTCGTT TTGCTGATGC TCGTCGCCTC CGCATCCGTT TTCGCCCAGC CCGGGGGCGG AATGGGAGGC GGCGGAGGCG GGGGCGGCTG CACCGGGGGA
GGCAGCGGGG ACTGCAGCGG GGGCGGCCCG GGGGTCAACG GCGGTGGAAT GGGCGGAGGT GGCGGCCCCG GCAGCAACAG CGGCGGAATG ACGGGCATGG CAAACCCGCA GGGCCCGGGA
CTGTCGTTCT CCTTCTACTC CGAGTCGTGC CCCAAGGCGG CGGACATCGT CGCGGCGCGC GTGTACGCCG CGTTTAAGAA GGACCGCGGC GTCCCTGCGC CGCTGCTCCG CCTGCACTTC
CACGATTGCT TCGTGCAGGG TTGCGACGCC TCCGTGCTGC TCGACTCCAC ATCCAACAAC AAGGCGGAGA AGGACGCGGA TCCCAACGCC ACTCTCGGTG CATTCGACGT GATCGACGAC
ATCAAGGCGC ACCTCGAGGC CGAATGCCCC GGCACCGTGT CTTGCGCCGA CATTCTCGCT CTCGCCGCGC GCGAAGGCGT GCATCTGGCC GGCGGTCCGC TCACGGAGGT GCCTCTGGGG
CGTCGCGACG GGCTGACGTC ATTCGCGCTT GCGGCGGAGA CGTTCCTCCC AGGATCCACC CTCAACGTCT CCGGGCTTGT GCACAACTTC GCTACAGTCG GCCTCGATAT CCTCGATGTC
GCCACACTCA GCGGCGCGCA CACGATGGGC GAGGCTCGCT GCGTGAGCCT GAAGAATCGC CTGACGCAGA ATGACCCCAC GATGAACCCC GAGTTCGCTG CTTACGTCAA GGCCAAGTGC
GGCACGAGCA ACATTAGCCC CAAGGCTATG ATCAACAACG ACTACAAGAC CCCCAGCCGG TTCGATAACC AGTATTACAA GAACCTGCTG GCTCGTGCTG GCCTCCTCAC CACGGACCAA
GCTCTCATTT ACAACCGCAC GACCATGCGC GCTGTGAAGG TATTCGCCAA GAAAAAGAGC GTTTTCTTCA AGCACTTCAG GCGCTCTGTC ATGAAGATGG GTATGATCAC ACCCCTTACT
GGCAGCCAGG GCCAGATCAG GAGCAACTGC CACCGGGTAA ATGCCTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AATTCCATCC CTCCGTCAGG GCCTCTCGAA TTGTACATAA AGCTCGAGCT TCCAAATATT CTCGCATTCC CTCTTCAGAA CCAATTTGCA ACCCGGCTGA ACCTCGCGCA TCTTCACCTT
TCTTCACATT GTTTTCCGAG CTATGGCGTC GGCGACATTC CCAGCGCTCG TTTTGCTGAT GCTCGTCGCC TCCGCATCCG TTTTCGCCCA GCCCGGGGGC GGAATGGGAG GCGGCGGAGG
CGGGGGCGGC TGCACCGGGG GAGGCAGCGG GGACTGCAGC GGGGGCGGCC CGGGGGTCAA CGGCGGTGGA ATGGGCGGAG GTGGCGGCCC CGGCAGCAAC AGCGGCGGAA TGACGGGCAT
GGCAAACCCG CAGGGCCCGG GACTGTCGTT CTCCTTCTAC TCCGAGTCGT GCCCCAAGGC GGCGGACATC GTCGCGGCGC GCGTGTACGC CGCGTTTAAG AAGGACCGCG GCGTCCCTGC
GCCGCTGCTC CGCCTGCACT TCCACGATTG CTTCGTGCAG GGTTGCGACG CCTCCGTGCT GCTCGACTCC ACATCCAACA ACAAGGCGGA GAAGGACGCG GATCCCAACG CCACTCTCGG
TGCATTCGAC GTGATCGACG ACATCAAGGC GCACCTCGAG GCCGAATGCC CCGGCACCGT GTCTTGCGCC GACATTCTCG CTCTCGCCGC GCGCGAAGGC GTGCATCTGG CCGGCGGTCC
GCTCACGGAG GTGCCTCTGG GGCGTCGCGA CGGGCTGACG TCATTCGCGC TTGCGGCGGA GACGTTCCTC CCAGGATCCA CCCTCAACGT CTCCGGGCTT GTGCACAACT TCGCTACAGT
CGGCCTCGAT ATCCTCGATG TCGCCACACT CAGCGGCGCG CACACGATGG GCGAGGCTCG CTGCGTGAGC CTGAAGAATC GCCTGACGCA GAATGACCCC ACGATGAACC CCGAGTTCGC
TGCTTACGTC AAGGCCAAGT GCGGCACGAG CAACATTAGC CCCAAGGCTA TGATCAACAA CGACTACAAG ACCCCCAGCC GGTTCGATAA CCAGTATTAC AAGAACCTGC TGGCTCGTGC
TGGCCTCCTC ACCACGGACC AAGCTCTCAT TTACAACCGC ACGACCATGC GCGCTGTGAA GGTATTCGCC AAGAAAAAGA GCGTTTTCTT CAAGCACTTC AGGCGCTCTG TCATGAAGAT
GGGTATGATC ACACCCCTTA CTGGCAGCCA GGGCCAGATC AGGAGCAACT GCCACCGGGT AAATGCCTAA TTTCCCCAGC CAATCCAGGT CTAGTGTGAG GCTATGAAAG GGTCCTCCCC
TGTGAAGTGC TAGCAGACAC ATAGTGGATG TGAAGGGGAG GGGGACAGGA GGATCGGTCC TTGGCTAACA GCAGTTGGCT TGGGCACCCG CCAACTTAGA GGCCAGTCCA GGACAGTTGG
GGTTGGGGGG CGATGCATCA GGTTGGGGGT CTGTTTGTTG TGTCAGTGTG TTGGAAATAA ATTACGATAC AGTACTGCAC ATTGGCGAAG CGCTGAAGTC ATAAAAATAT AACTACCTAC
CATCCAGTTT CATGGCACAA TGAAGTGAGG CTACCGGTAT ACTGTATGGA AATACCAGTA AACAAGAACA AACAGATAAA TCTGGGGAAA TTCAGCCCAC CACGAACCAA GCTTGGAGAA
TCAACAAAGT TGTACAGGCC ATGAGTTGAA ACCGTTCCCG CGTGTAACAG ACCGTATTCG ATCAATCCGC TCATCTTCTG CCATGTCATC TGGGCTGTAC ACCCACTTGC GCCGATCCTG
ACGGATGCGA GGGGCTGACT TTCTGGCACC CAAACTGCCC AATGAGCTTC TGCCACGTGG AGAGTACATG TCCCAACCAC TCACTGCGGA GCTGCTCTCT GACGGCCGCT CTCTGCCCTC
TTGCACGACA GCATTCACAA TGAGGGACTT GCTCGATTTC CGTGGCTTCC CCTGCCTTGG CTTGCCAGTC GCCCTCCTCC CCCTTGTCCA CGCGCTCCTG CTATCCACCT CCTCCTCCTC
CTCCTCATCA TCA
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Retrieve as FASTA
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