View Redoxidase 13077

Entry information : AtrPrx14(AmTr_v1.0_scaffold00069.152/ AMTR_s00069p00173890)

Entry ID	13077
Creation	2015-02-10 (Christophe Dunand)
Last sequence changes	2015-02-10 (Christophe Dunand)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2020-11-10 (Christophe Dunand)

Peroxidase information: AtrPrx14(AmTr_v1.0_scaffold00069.152/ AMTR_s00069p00173890)

Name

AtrPrx14(AmTr_v1.0_scaffold00069.152/ AMTR_s00069p00173890)

Class

Class III peroxidase [Orthogroup: Prx036]

Taxonomy

Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella

Organism

Amborella trichopoda [TaxId: 13333 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtrPrx14 start..stop	S start..stop
PpePrx62	445	7.1e-159	9..310	24..324
CsaPrx75	444	9.26e-159	10..310	17..316
LuPrx175	436	2.38e-155	10..310	22..321
GmPrx77	434	1.29e-154	10..310	23..322

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13077' 'complement(join(1..567,1210..1398,1532..1708))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1532..1708	175	N° 2	1210..1398	187	N° 3	1..567	565
complement(join(1..567,1210..1398,1532..1708))

Literature and cross-references AtrPrx14(AmTr_v1.0_scaffold00069.152/ AMTR_s00069p00173890)

DNA ref.	GenBank: NW_006500346.1 (2840017..2838310) [Incorrect prediction]
Cluster/Prediction ref.	Genebank: 18447814 [Incorrect prediction]

Protein sequence: AtrPrx14(AmTr_v1.0_scaffold00069.152/ AMTR_s00069p00173890)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	310
PWM (Da):	34127.2
PI (pH):	9.74

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MVMGSGTIRSEAKLSTSYYDRTCPQVERVVSETVWNASMHDSKVPPRILRMFFHDCFITGCDASVLLDSTPKNQAEKDAPPNVSLRSFYVIDQAKAKLETVCPRTVSCSDILTIAARDAV
TLSGGPYWNMKKGRKDGKVSKASNTRGLPGPTFNVSQLLQSFSNRGLSKKDLVILSGGHTIGFSHCSSLKTRIRNFNSSHFSDPTMNPEFAVTLRTQCPPHNVNPNAGQLLDSTSRKFDN
NYYKRLMGGKGVFGSDQDLFTDPRTRGLVELFAKDQGAFFREFAASMIKLGEVGVKDKDGEVRINCRIVN*

Retrieve as FASTA

Remarks

Complete sequence from DNA (introns 1 and 2).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTAATGGGCAGCGGAACAATTCGCTCAGAGGCAAAGCTGAGCACTTCTTACTACGACCGGACTTGCCCTCAAGTGGAGAGGGTGGTGTCTGAAACTGTATGGAACGCATCGATGCAC
GACTCCAAAGTCCCGCCCCGCATCCTCAGAATGTTCTTCCACGACTGCTTCATAACGGTTAAACTCTCTCTCTTTCTAAAGCAAGCATGTTTAGCTAGGAGGACCCATGGATTCAGTGCA
ATAATGCTATGATCGAACCCCATGTATATCCAAGGTTTTAAATGTAATTTGGTCGTACTTTCTGTGGCAGGGGGATGCGACGCATCAGTGTTACTAGACTCGACTCCTAAAAACCAGGCA
GAGAAAGATGCACCACCCAATGTATCCTTGCGCTCTTTCTACGTGATAGACCAGGCCAAAGCTAAGCTCGAGACTGTTTGCCCGAGAACGGTCTCATGCTCTGACATCCTCACTATAGCA
GCAAGAGATGCAGTAACCCTGGTACTTCCAATCCCTCACTCTACCACCACCCATATATATATATATATATATGGGTTTTCTACAATAAACTACTCAAATGGTGATTTCGGAAAATCGTAC
TTCCAAACCTCTGAACATAAAATACCCTTCGGTCAGTCTAACTTTCAAGATGGGATATTTGAGGTAATTTTGAAACCCATTATAGATAGTAGGATGGAATAATGGGTGAGAGAGTCAGAT
TATAAAACTCACCTCCATTTCTCCTCCGAAATTCAGATTAATCTAAGTTATAAGGGCATTTATGATTTATGATAAAACTTCTGGATGCAAGGTTGTGTGCGTGTATTTATTTTCTATGCA
AGAGTGTATACATTGTCGATTTAACTGATGGATGGACGGTGATCGAGCATGAGTGGAACCAAGCCCTTGCATCATGTCATGTTCTCTCAAGATTTCAGCCTATTAATTGATTGGATGGTG
AAAGCATTTATGACCATTTCCATGAGCACGGCAATAGTTCCATTAAGGAATTATTGGACCTGCTCCTCCATCCTCCCTCAATTTCTCACCAACCCATCTGATAAAAATTCTATCACTTTC
TTCTCCACAAAATCCGACTGCATTTCCTTCCAAAATAATCAATGTTGCCTGTTGCCTCTACAGTCTCAGGAGGCCCATACTGGAACATGAAGAAGGGAAGGAAAGATGGTAAGGTTTCGA
AGGCCTCAAACACCAGAGGCCTACCAGGACCCACATTCAATGTCTCTCAGCTCCTCCAAAGCTTCTCAAACCGAGGCCTCTCTAAAAAAGACCTAGTGATCTTATCAGGAGGCCACACTA
TTGGTTTCTCCCACTGCTCTTCCCTCAAAACACGGATTCGTAACTTCAATTCGAGCCATTTTTCTGACCCCACAATGAATCCTGAATTCGCTGTCACTCTTAGAACCCAATGCCCTCCCC
ACAATGTGAACCCTAATGCTGGCCAATTACTTGACTCCACTTCGAGAAAATTTGATAACAATTATTATAAAAGGTTGATGGGAGGTAAAGGAGTGTTTGGGTCTGACCAAGACTTGTTCA
CTGACCCTCGAACCAGAGGGCTTGTTGAACTGTTTGCAAAGGATCAAGGGGCATTCTTTAGAGAGTTTGCAGCTTCCATGATCAAGCTGGGGGAGGTAGGTGTGAAGGATAAGGATGGTG
AAGTCAGGATTAACTGCAGGATTGTTAACTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA