Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
334 |
| PWM (Da): |
36829.76 |
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| PI (pH): |
9.63 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAIYDKHYST VHIVSQLFII LVLATSTVCS SELSPYFYNH TCPQALSIVK LKVKKAVEKE ARMAGSLLRL HFHDCFVQGC DASLLLDDTP KFRGEKTSNP NNKSARGFNV IDDIKRQLES
ECPGTVSCAD IVAIAARDSV VLTGGPEWTV QLGRRDSRSA SFSGSNQNIP APNSTLQSLI TKFKRQGLDE VDLVALSGSH TIGQSRCTSF KQRLYNQTGN GKPDSTIQAM FLTKLKSSCP
RSGGDNNLSP LDFTSPTKFD NHYFNNLKSM KGLLNSDEEL YTKHNQLTVG IVNTYAADQK LFFKQFAKSM VKLGNIKPLT GSKGEIRHNC RRMN
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (not predicted form SymDB, scaffold259) and RNA seq (gba_locus_1321_iso_1_len_1356_ver_2). No EST. |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCATCT ATGATAAGCA TTACAGTACT GTTCACATTG TATCACAACT ATTTATTATT CTTGTTTTGG CAACTAGCAC TGTGTGCAGT TCTGAGTTGA GCCCATATTT CTATAACCAT
ACCTGTCCTC AGGCTCTCTC CATTGTCAAG TTAGCGGTAA AAAAGGCAGT AGAAAAAGAG GCTCGAATGG CAGGATCTTT ACTTCGTCTT CAGTTCCACG ATTGTTTTGT CCAGGTAAAA
TTTGTTTACA TTTTTATTTT CTCAGCTGAT CAATTCTGAA TTAATGTAAT TTGGTTTGTA TCTGCATATT CGAATTGCTT ACAGAAATCT CTATATGTCG ACTGCTAACA ATAAGCCGCG
TACTTAATAA TAACAAATCT TGACAGGGCT GCGATGCTTC CCTGTTGTTA GACGACACCC CCAAATTTAG AGGAGAAAAG ACATCAAACC CCAATAACAA ATCTGCGAGA GGATTTAACG
TGATAGACGA TATCAAAAGG CAGCTGGAGA GTGAATGCCC TGGAACTGTG TCTTGTGCTG ACATCGTTGC CATTGCTGCT CGCGATTCTG TTGTCCTGGT ATTATTATTA TTAGTTTTGA
AAATATATTT TACAATAGTT TAGTATTATT AGTTTTTTAA ATATATTTTA TAAGTAATAT TAGGACATCA ATATTAAAAC GCATGTAATA AATATCGGTG TGGCAGACTG GAGGACCAGA
GTGGACTGTA CAACTGGGAA GAAGGGACTC GAGAAGTGCA AGCTTTAGCG GTTCGAATCA GAACATTCCA GCGCCAAATT CTACTCTGCA GAGTCTCATT ACAAAATTCA AACGCCAAGG
CCTCGACGAG GTGGATTTGG TTGCACTCTC GGGTATGAAT TCATTTACAC ACTTCTCTAA ATTTACTTGT TTTTTTTATA TCGTTGCTAA TGACGATGAA ATTACAAAAT GCATTATTTG
CAAATTATGA GAATGCTGCA GGTAGCCACA CCATCGGCCA GTCTCGATGC ACGAGCTTTA AGCAGAGGCT GTACAATCAG ACTGGAAATG GGAAACCTGA TTCAACCATC CAAGCTATGT
TTTTGACAAA ATTGAAATCA AGCTGTCCAA GATCAGGTGG AGATAACAAC TTATCTCCCT TGGATTTCAC CAGCCCAACT AAATTTGACA ACCATTACTT CAACAACCTG AAGAGCATGA
AGGGACTGTT GAATTCGGAC GAGGAACTCT ATACCAAGCA CAACCAATTG ACAGTGGGGA TTGTGAATAC ATATGCAGCG GATGAGAAGC TCTTCTTCAA GCAGTTTGCC AAGTCGATGG
TGAAGTTGGG CAACATAAAA CCCTTGACAG GATCCAAGGG AGAAATCCGA CACAACTGCC GCCGAATGAA TTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCATCT ATGATAAGCA TTACAGTACT GTTCACATTG TATCACAACT ATTTATTATT CTTGTTTTGG CAACTAGCAC TGTGTGCAGT TCTGAGTTGA GCCCATATTT CTATAACCAT
ACCTGTCCTC AGGCTCTCTC CATTGTCAAG TTAAAGGTAA AAAAGGCAGT AGAAAAAGAG GCTCGAATGG CAGGATCTTT ACTTCGTCTT CATTTCCACG ATTGTTTTGT CCAGGGCTGC
GATGCTTCCC TGTTGTTAGA CGACACCCCC AAATTTAGAG GAGAAAAGAC ATCAAACCCC AATAACAAAT CTGCGAGAGG ATTTAACGTG ATAGACGATA TCAAAAGGCA GCTGGAGAGT
GAATGCCCTG GAACTGTGTC TTGTGCTGAC ATCGTTGCCA TTGCTGCTCG CGATTCTGTT GTCCTGACTG GAGGACCAGA GTGGACTGTA CAACTGGGAA GAAGGGACTC GAGAAGTGCA
AGCTTTAGCG GTTCGAATCA GAACATTCCA GCGCCAAATT CTACTCTGCA GAGTCTCATT ACAAAATTCA AACGCCAAGG CCTCGACGAG GTGGATTTGG TTGCACTCTC GGGTAGCCAC
ACCATCGGCC AGTCTCGATG CACGAGCTTT AAGCAGAGGC TGTACAATCA GACTGGAAAT GGGAAACCTG ATTCAACCAT CCAAGCTATG TTTTTGACAA AATTGAAATC AAGCTGTCCA
AGATCAGGTG GAGATAACAA CTTATCTCCC TTGGATTTCA CCAGCCCAAC TAAATTTGAC AACCATTACT TCAACAACCT GAAGAGCATG AAGGGACTGT TGAATTCGGA CGAGGAACTC
TATACCAAGC ACAACCAATT GACAGTGGGG ATTGTGAATA CATATGCAGC GGATCAGAAG CTCTTCTTCA AGCAGTTTGC CAAGTCGATG GTGAAGTTGG GCAACATAAA ACCCTTGACA
GGATCCAAGG GAGAAATCCG ACACAACTGC CGCCGAATGA ATTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GAACCGCTCT TCCGATCTAT AGCTTACTGG CTCTCTCGTT CATCGGATTC GATTCCCATT GTTTATAGTA AAGATGGCCA TCTATGATAA GCATTACAGT ACTGTTCACA TTGTATCACA
ACTATTTATT ATTCTTGTTT TGGCAACTAG CACTGTGTGC AGTTCTGAGT TGAGCCCATA TTTCTATAAC CATACCTGTC CTCAGGCTCT CTCCATTGTC AAGTTAAAGG TAAAAAAGGC
AGTAGAAAAA GAGGCTCGAA TGGCAGGATC TTTACTTCGT CTTCATTTCC ACGATTGTTT TGTCCAGGGC TGCGATGCTT CCCTGTTGTT AGACGACACC CCCAAATTTA GAGGAGAAAA
GACATCAAAC CCCAATAACA AATCTGCGAG AGGATTTAAC GTGATAGACG ATATCAAAAG GCAGCTGGAG AGTGAATGCC CTGGAACTGT GTCTTGTGCT GACATCGTTG CCATTGCTGC
TCGCGATTCT GTTGTCCTGA CTGGAGGACC AGAGTGGACT GTACAACTGG GAAGAAGGGA CTCGAGAAGT GCAAGCTTTA GCGGTTCGAA TCAGAACATT CCAGCGCCAA ATTCTACTCT
GCAGAGTCTC ATTACAAAAT TCAAACGCCA AGGCCTCGAC GAGGTGGATT TGGTTGCACT CTCGGGTAGC CACACCATCG GCCAGTCTCG ATGCACGAGC TTTAAGCAGA GGCTGTACAA
TCAGACTGGA AATGGGAAAC CTGATTCAAC CATCCAAGCT ATGTTTTTGA CAAAATTGAA ATCAAGCTGT CCAAGATCAG GTGGAGATAA CAACTTATCT CCCTTGGATT TCACCAGCCC
AACTAAATTT GACAACCATT ACTTCAACAA CCTGAAGAGC ATGAAGGGAC TGTTGAATTC GGACGAGGAA CTCTATACCA AGCACAACCA ATTGACAGTG GGGATTGTGA ATACATATGC
AGCGGATCAG AAGCTCTTCT TCAAGCAGTT TGCCAAGTCG ATGGTGAAGT TGGGCAACAT AAAACCCTTG ACAGGATCCA AGGGAGAAAT CCGACACAAC TGCCGCCGAA TGAATTGAAT
TGTTGAAAAG CTTTTACAGT CAATAAAGGT AATGAGGTAT TGTTGGCTGC TCACGTACCC ATATACAGCT CGCAGGAATC AGGATCGTTC AGTCAGTCTC CATCAATAAA AGTAGTATTC
TCTCCTACTA CGTGTTACTT TACAGTGTTG CTTTTGTTCA TTAATAAGGT TTTGTTCCGC ACTGAGGAAC AATATATACG ATCACGTTTA AATTTTATAC AGTCTGAACT CTTTAATATG
ATATATTATT ATGTGTTTTT TTGCCGTACG AATAAA
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Retrieve as FASTA
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