Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
358 (335) |
| PWM (Da): |
38063.76 (35619.6) |
Transmb domain: |
i7-29o |
| PI (pH): |
4.2 (4.16) |
Peptide Signal: |
cut: 24 range:24-358 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MEKYGKTLLS IILCACIFSS ADGLKADLPD PVAGLSWTFY NESCPNLESI VNATLDSILA QDITQAAGLL RLHFHDCFVQ GCDASVLLEG STSGPDEQDA PPNLTLRSRA FQIINQIKAA
VEANCSGVVT CADIVALAAR DSIVKAGGPE YPVPLGRRDS LTFANQSVTT SNLPPPTANI SGLMSIFGPK GFNLTDLVAL SGGHTIGLGH CSSFDNRLYN ISTGAQQQDS TLNQSLATNL
YSICPAVNNT VNSTNLDIGS PNLFDNQYFV NIQNGNVLFT SDETLYTNTT TQNIVDSFAS NQTLFFEKFV LGMLKMGQLN VLTGSQGEIR SNCSAPNPSS YEEIIESIVD KEGSLSEL
|
Retrieve as FASTA
|
|
| Remarks |
Complete sequence from genomic and RNA seq (gba_locus_9468_iso_1_len_1570_ver_2) |
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGAGAAAT ACGGAAAAAC TCTTCTTTCG ATCATTTTGT GCGCTTGCAT ATTCTCTTCT GCTGATGGTT TAAAGGCTGA TCTGCCGGAC CCAGTTGCAG GTCTGTCATG GACATTCTAC
AACGAGAGTT GCCCTAACTT GGAGTCCATA GTCAATGCGA CTCTCGACTC TATTTTGGCG CAAGATATCA CCCAAGCTGC AGGGTTGCTC CGACTCCACT TCCACGATTG CTTCGTCCAG
GGTTGCGATG CGTCGGTCTT ACTGGAAGGA TCAACAAGCG GTCCTGACGA GCAGGACGCC CCTCCCAACT TAACACTCAG AAGCCGGGCA TTCCAAATCA TCAATCAAAT CAAAGCCGCA
GTAGAAGCCA ACTGCAGTGG TGTGGTAACG TGCGCTGACA TCGTGGCTTT GGCGGCTCGG GACTCCATAG TAAAGGCCGG AGGACCGGAG TATCCTGTAC CGCTTGGTCG CAGAGACAGC
CTCACCTTTG CCAATCAATC GGTCACTACT TCTAACTTGC CTCCTCCAAC TGCAAATATT TCGGGACTTA TGAGCATATT TGGTCCCAAG GGCTTTAATT TGACGGATCT GGTTGCGCTT
TCAGGTGGAC ACACAATTGG GCTCGGCCAC TGCTCCTCCT TCGACAACAG ACTCTACAAC ATTTCCACTG GAGCCCAACA GCAGGACTCC ACTCTCAACC AGAGTTTAGC TACCAATCTT
TACTCCATAT GTCCAGCGGT TAATAATACC GTCAACAGCA CCAATTTGGA CATCGGCAGC CCAAACCTGT TCGACAACCA GTACTTCGTC AATATACAGA ATGGGAATGT CCTCTTCACC
TCCGACGAGA CGCTGTACAC AAACACCACT ACTCAAAACA TCGTCGACAG CTTTGCATCG AATCAGACGT TGTTCTTTGA AAAATTCGTG CTGGGGATGC TTAAGATGGG CCAACTTAAT
GTACTGACTG GCAGCCAGGG AGAGATTCGA AGCAACTGCT CCGCTCCAAA TCCTTCGTCT TATGAAGAAA TTATAGAGTC TATCGTGGAT AAAGAGGGAT CTCTATCTGA GCTTTAA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GCGCCTTAGT CAAACCATTC TCGGAAAAAC TCTCTTCTTT CGATCATTTT GGAAATACTG CAGGATCGGT GTGGCAATTG CATTCAGAAA TCTGCAACTC TAATGGAGAA ATACGGAAAA
ACTCTTCTTT CGATCATTTT GTGCGCTTGC ATATTCTCTT CTGCTGATGG TTTAAAGGCT GATCTGCCGG ACCCAGTTGC AGGTCTGTCA TGGACATTCT ACAACGAGAG TTGCCCTAAC
TTGGAGTCCA TAGTCAATGC GACTCTCGAC TCTATTTTGG CGCAAGATAT CACCCAAGCT GCAGGGTTGC TCCGACTCCA CTTCCACGAT TGCTTCGTCC AGGGTTGCGA TGCGTCGGTC
TTACTGGAAG GATCAACAAG CGGTCCTGAC GAGCAGGACG CCCCTCCCAA CTTAACACTC AGAAGCCGGG CATTCCAAAT CATCAATCAA ATCAAAGCCG CAGTAGAAGC CAACTGCAGT
GGTGTGGTAA CGTGCGCTGA CATCGTGGCT TTGGCGGCTC GGGACTCCAT AGTAAAGGCC GGAGGACCGG AGTATCCTGT ACCGCTTGGT CGCAGAGACA GCCTCACCTT TGCCAATCAA
TCGGTCACTA CTTCTAACTT GCCTCCTCCA ACTGCAAATA TTTCGGGACT TATGAGCATA TTTGGTCCCA AGGGCTTTAA TTTGACGGAT CTGGTTGCGC TTTCAGGTGG ACACACAATT
GGGCTCGGCC ACTGCTCCTC CTTCGACAAC AGACTCTACA ACATTTCCAC TGGAGCCCAA CAGCAGGACT CCACTCTCAA CCAGAGTTTA GCTACCAATC TTTACTCCAT ATGTCCAGCG
GTTAATAATA CCGTCAACAG CACCAATTTG GACATCGGCA GCCCAAACCT GTTCGACAAC CAGTACTTCG TCAATATACA GAATGGGAAT GTCCTCTTCA CCTCCGACGA GACGCTGTAC
ACAAACACCA CTACTCAAAA CATCGTCGAC AGCTTTGCAT CGAATCAGAC GTTGTTCTTT GAAAAATTCG TGCTGGGGAT GCTTAAGATG GGCCAACTTA ATGTACTGAC TGGCAGCCAG
GGAGAGATTC GAAGCAACTG CTCCGCTCCA AATCCTTCGT CTTATGAAGA AATTATAGAG TCTATCGTGG ATAAAGAGGG ATCTCTATCT GAGCTTTAAA ATCGTACCAT TGGAGAGATC
AGTGCTTCCC ATGGATCTAA ACAGCTTTAT GTTATAAATC ATAAATAAAT ACTTATTTCA AATATGAAAT GTTATTACTT GCAAGGATTT ACGTGAGGCA AGATTCTGAA AAAAAGATGC
GATCTCTTCC ATAAAGTAAA ATTGGCATTC CCTCGCGTTC AATTCCATCG CATATATAAT AAGTCAACTA TTAGGCATGG AGTGACTTCG TGTATTACCC TTATGTGTGT GTTTGTTGAT
GGCAACGCAT AAAATGTTAA GTTGGAATGG TGTAGACATG TACATGTGTG CACAAATGGA GGACTACGAG ACAAATATGT TGAAAGCAAT AGTTTATTTA TATAAAATTA TGTATCTCCG
TATATCGGGC
|
Retrieve as FASTA
|
|
