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Entry information : GbPrx37(Ginbil_2036606_SGTW/Ginbil_2034758_SGTW)
Entry ID 13129
Creation 2015-04-13 (Christophe Dunand)
Last sequence changes 2015-04-13 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2020-11-23 (Christophe Dunand)
Peroxidase information: GbPrx37(Ginbil_2036606_SGTW/Ginbil_2034758_SGTW)
Name GbPrx37(Ginbil_2036606_SGTW/Ginbil_2034758_SGTW)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Ginkgoopsida Ginkgoaceae Ginkgo
Organism Ginkgo biloba    [TaxId: 3311 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GbPrx37
start..stop		 S start..stop
PtaPrx41 492 3.15e-177 25..327 29..331
PabPrx64 488 2.66e-175 25..327 29..331
CmichPrx14 483 1.92e-173 22..327 38..343
PtaPrx04 476 2.38e-170 27..327 71..368
Literature and cross-references GbPrx37(Ginbil_2036606_SGTW/Ginbil_2034758_SGTW)
Protein sequence: GbPrx37(Ginbil_2036606_SGTW/Ginbil_2034758_SGTW)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (303)
PWM (Da):   %s   35644.38 (33063.2)  
PI (pH):   %s   4.66 (4.57) Peptide Signal:   %s   cut: 25 range:25-327
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKMKMNLMMG VMMVGVIGWG VADAQLSVDY YQWTCPQAEN IIREEMARKQ AANPTSAAGT LRIYFHDCFV EGCDASVLIS STPSNRAERE AEINLSLPGD GFDAIARAKS AVEAECPGIV  SCADVLSIAT RDLLTLIGGP YYEVMKGRKD GLISEAWRVE GNLPDVAMSV DELNALFASK GFNQTEMTTL SGAHTVGFAH CKEFMTRIYD YNDTHAIDPT MNPYYAMGLQ KACPQLNLDT 
TIAAFNDVIS PRNFDNVFYQ NLAKGLGLLA SDQILYADTR TRALVETYAS DQDAFFQAFA AAMVKLGSLG VKTGNQGEVR RRCDAFN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (uncorrect prediction from SymDB; only last exon and only first exon) and RNA seq (gba_locus_6875_iso_2_len_1303_ver_2). No EST found. http://medicinalplantgenomics.msu.edu
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGATGA AGATGAATTT GATGATGGGC GTGATGATGG TTGGGGTCAT CGGATGGGGA GTTGCAGATG CACAGCTGTC AGTGGATTAT TACCAGTGGA CATGCCCGCA AGCGGAGAAT  ATCATAAGAG AAGAGATGGC GAGGAAGCAG GCTGCCAATC CCACAAGTGC AGCAGGAACG TTGCGCATTT ACTTTCACGA CTGCTTCGTA GAGGGATGCG ATGCCTCTGT GCTGATTTCG  TCCACTCCGA GCAACAGGGC GGAGAGGGAA GCAGAAATAA ACCTGTCATT GCCAGGCGAC GGGTTCGATG CGATTGCCCG AGCCAAAAGT GCGGTTGAAG CAGAATGCCC GGGCATTGTA  TCGTGTGCGG ATGTGCTGTC GATTGCAACC AGAGATCTGC TAACTCTGAT CGGGGGGCCT TACTACGAGG TAATGAAGGG AAGAAAAGAT GGGCTGATCT CGGAGGCATG GAGAGTGGAA  GGGAACCTGC CGGATGTAGC AATGAGTGTG GATGAACTAA ATGCTCTGTT CGCCTCCAAA GGCTTCAACC AGACGGAAAT GACAACCCTT TCCGGGGCTC ACACCGTGGG TTTTGCCCAT  TGCAAAGAGT TCATGACGCG GATCTACGAC TACAACGACA CGCATGCCAT CGATCCCACC ATGAATCCTT ACTATGCCAT GGGCCTGCAG AAGGCCTGCC CCCAACTCAA TCTCGACACC  ACCATTGCCG CCTTCAATGA TGTCATTTCT CCCAGAAATT TCGACAATGT CTTCTATCAG AACCTGGCCA AGGGTCTTGG CTTGCTTGCC TCTGATCAGA TTCTGTATGC CGACACTCGG  ACTAGGGCTC TTGTGGAGAC TTATGCCTCG GACCAGGATG CATTTTTCCA AGCATTTGCG GCTGCCATGG TTAAACTGGG TAGTTTGGGT GTCAAAACTG GTAACCAGGG AGAGGTCAGA 
CGGAGGTGCG ATGCTTTCAA TTGA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AAAGGTCCAA GGGTTCTACA ATCGCAGAAA GAGTTTGGCT TGGAATAATG AAGATGAAGA TGAATTTGAT GATGGGCGTG ATGATGGTTG GGGTCATCGG ATGGGGAGTT GCAGATGCAC  AGCTGTCAGT GGATTATTAC CAGTGGACAT GCCCGCAAGC GGAGAATATC ATAAGAGAAG AGATGGCGAG GAAGCAGGCT GCCAATCCCA CAAGTGCAGC AGGAACGTTG CGCATTTACT  TTCACGACTG CTTCGTAGAG GGATGCGATG CCTCTGTGCT GATTTCGTCC ACTCCGAGCA ACAGGGCGGA GAGGGAAGCA GAAATAAACC TGTCATTGCC AGGCGACGGG TTCGATGCGA  TTGCCCGAGC CAAAAGTGCG GTTGAAGCAG AATGCCCGGG CATTGTATCG TGTGCGGATG TGCTGTCGAT TGCAACCAGA GATCTGCTAA CTCTGATCGG GGGGCCTTAC TACGAGGTAA  TGAAGGGAAG AAAAGATGGG CTGATCTCGG AGGCATGGAG AGTGGAAGGG AACCTGCCGG ATGTAGCAAT GAGTGTGGAT GAACTAAATG CTCTGTTCGC CTCCAAAGGC TTCAACCAGA  CGGAAATGAC AACCCTTTCC GGGGCTCACA CCGTGGGTTT TGCCCATTGC AAAGAGTTCA TGACGCGGAT CTACGACTAC AACGACACGC ATGCCATCGA TCCCACCATG AATCCTTACT  ATGCCATGGG CCTGCAGAAG GCCTGCCCCC AACTCAATCT CGACACCACC ATTGCCGCCT TCAATGATGT CATTTCTCCC AGAAATTTCG ACAATGTCTT CTATCAGAAC CTGGCCAAGG  GTCTTGGCTT GCTTGCCTCT GATCAGATTC TGTATGCCGA CACTCGGACT AGGGCTCTTG TGGAGACTTA TGCCTCGGAC CAGGATGCAT TTTTCCAAGC ATTTGCGGCT GCCATGGTTA  AACTGGGTAG TTTGGGTGTC AAAACTGGTA ACCAGGGAGA GGTCAGACGG AGGTGCGATG CTTTCAATTG ACATTCTCAC ATTCGATTCT TCCTCAAATT CGATTCTTCG TCAAGCTTTG  TCTATGGGCA TTGACTCATG GCAGGGCCTG GTCATTTGTA CATGATTCAA GTCAAATTCC ATTGTTCTCT GCGGTGGCTC GAACTTTGTA CGTTAGGCCT GGTTAGAGCA TTTCAGACAA 
GGTGATTCAA ATATATTACG AGTAATTTTG TGGAGTGTAA TCTTATTTGG GCTGTTGATT TTACTGATAA TAATAATCAT GAACTGAGTT GCCTATCGAA AAA 

Retrieve as FASTA