Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
337 (304) |
| PWM (Da): |
36487.16 (32817.1) |
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| PI (pH): |
7.99 (6.50) |
Peptide Signal: |
cut: 34 range:34-337 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MPAKSASRIT SIVQKIFLAF TIWISHANYP VKADNLQVGF YNSRCNAAES IIQNAVSKAF MQNPGIAAGL IRMHFHDCFV NGCDGSVLID STSGNTAEKD SPANNPSLRG FEVIDEAKKN
LEVVCKGVVS CADIVAFAAR DSAKLAGEVS WDVPAGRRDG TVSKASDVQG NLPPSTFNVN QLTQRFAEKG LSQEEMVTLS GAHTIGRSHC ASFTNRLYNF NSTTGQDPSL DPTYANALKR
QCPRKNPNGN TVVPMDTITP TVLDNVYYGD VLSNRGLFTS DQTLLTQPAT ASMVMQNWFD ILEWKNKFKA AMVRMGEVGV LTGSQGEIRL NCRVINS
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (no prediction from SymDB, scaffold10949) and RNA seq (gba_locus_61573_iso_1_len_1286_ver_2). No EST found.
scaffold10949 contains two fragments (pseudogenes) GAHTIGRSHCASFTNRLYNFNSTTGQDPSLDPTYANALKRQCPRRNPNGNTVVLMETITLTILDNVYYGEVLSNHFVYIHRLQYLQYP and GAHTIGCSHCDSFTNRIYNFNNTTGQDPSLDPMYVNALK*QCPRRNPNGNIVVPMETITLTILGNVYYREFLSNWGLFTS + LFTSD*TLLTQLATASMVMEN*FYMLEWKNKFKDSMVRMGEVGILTRS*GEIHLNCRIINS |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCCTGCAA AATCAGCTAG CAGAATCACG AGTATAGTGC AAAAGATATT CTTAGCATTT ACTATATGGA TTTCTCATGC TAATTATCCT GTTAAAGCTG ACAATCTTCA AGTGGGTTTC
TATAATAGCC GCTGTAATGC AGCTGAAAGC ATAATCCAAA ATGCAGTTTC CAAGGCGTTT ATGCAAAATC CTGGAATAGC AGCTGGTCTT ATAAGGATGC ATTTCCACGA CTGCTTTGTC
AATGTAAGGG ACAATACATT GTGGTAATAT TGTATAATTA TTCACTGGCC TTCTCCATTT TTATAGCTAT TTACATATAT ATATATATAT ATATATATAA ATAATTTCAA TAATTATATT
AATAGTGTAT AGGTATTCAT TAATGAATGT TTTTCAGGGA TGCGATGGAT CAGTTCTGAT TGATTCGACT TCAGGGAATA CAGCAGAGAA GGACTCGCCT GCAAACAATC CCAGTCTTCG
AGGCTTCGAA GTAATTGATG AGGCAAAGAA GAATTTGGAA GCAGTTTGTA AGGGGGTGGT ATCATGTGCA GATATTGTAG CATTTGCAGC TCGTGATAGT GCAAAACTGG TAATGTTTTA
TGCTTATATA TTACTTCTAA TTTCAATGTC TATGCGATTC CATTATCAAT ATTGAGTTGA AAGATATATG CTAATAGTTT GTGTGTGTGT GTGTATTCAT TTGAAATATC GTAGGCGGGT
GAAGTGAGTT GGGATGTTCC AGCAGGCAGA AGAGATGGAA CGGTTTCAAA GGCTAGTGAC GTCCAAGGAA ATCTGCCTCC TTCCACATTT AATGTTAACC AACTGACACA AAGATTTGCA
GAAAAAGGTC TCTCGCAAGA AGAAATGGTC ACATTATCTG GTAAAATTTT CTTCTGGGTC GTTCGAAATA CTTATTTAAT CATGAAGTTG TAGTAGCCCA CAAAAGTCTC TGTTAAGGAA
ATCATTTGAA CCCATGTTTA CAATTTCTGT GACTATCCTA ACATTTTGAT CCAACATTTT GATATCATAA TAGTTACATA TTCATTACAG CACATATAGC TGCATATAGA TTGATTGATT
TCAATTGATA TTTTTATGTT TTATACACAA CTAGACATCT TGGACGACCA TATGCATTAA TCCTGCAACA GCGACAGAAT CTTCAAATTC ATCTGTAATA TTTTTTATCC CATATTAATG
GATAGATCAC TGATTTTAGT CAATAATTCA GGCTACGCTC CATAGACAAT TTTTTCTTAA AATAATTTTT TTAACGAGAG GACAGCAATG AAATCAAATA TAAACTAATC TTAGACTTTA
GAGAAACAGC TATTCTCATC ATCTGCATCA CAATATACAT GAATATTAAT TATCTCTTAG CATTTCTTTT ATTTAAAATT CAGATAATCG AAATTTTCAA TGCTGTGCGT TTTAGTAGCC
ATACAATAAC AATGCAACAC TAGCTACTAA CTCTGATATG TTAAATTATT ACAGGAGCTC ATACAATTGG TCGTTCGCAC TGCGCTTCAT TCACAAACAG GCTTTACAAC TTCAACAGCA
CAACGGGTCA AGACCCAAGT CTGGATCCAA CGTATGCGAA TGCACTCAAG CGACAATGTC CTCGAAAAAA CCCCAATGGA AATACTGTGG TGCCAATGGA CACCATCACA CCGACTGTTT
TGGATAATGT TTATTACGGA GACGTTCTTT CGAATCGGGG TTTGTTTACC TCTGATCAGA CACTGCTCAC ACAACCAGCG ACTGCAAGCA TGGTTATGCA GAACTGGTTT GACATTTTGG
AGTGGAAGAA CAAGTTCAAA GCCGCCATGG TGAGGATGGG CGAGGTCGGT GTACTCACTG GAAGCCAGGG CGAGATTCGT TTGAATTGCC GAGTTATCAA CTCTTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCCTGCAA AATCAGCTAG CAGAATCACG AGTATAGTGC AAAAGATATT CTTAGCATTT ACTATATGGA TTTCTCATGC TAATTATCCT GTTAAAGCTG ACAATCTTCA AGTGGGTTTC
TATAATAGCC GCTGTAATGC AGCTGAAAGC ATAATCCAAA ATGCAGTTTC CAAGGCGTTT ATGCAAAATC CTGGAATAGC AGCTGGTCTT ATAAGGATGC ATTTCCACGA CTGCTTTGTC
AATGGATGCG ATGGATCAGT TCTGATTGAT TCGACTTCAG GGAATACAGC AGAGAAGGAC TCGCCTGCAA ACAATCCCAG TCTTCGAGGC TTCGAAGTAA TTGATGAGGC AAAGAAGAAT
TTGGAAGTAG TTTGTAAGGG GGTGGTATCA TGTGCAGATA TTGTAGCATT TGCAGCTCGT GATAGTGCAA AACTGGCGGG TGAAGTGAGT TGGGATGTTC CAGCAGGCAG AAGAGATGGA
ACGGTTTCAA AGGCTAGTGA CGTCCAAGGA AATCTGCCTC CTTCCACATT TAATGTTAAC CAACTGACAC AAAGATTTGC AGAAAAAGGT CTCTCGCAAG AAGAAATGGT CACATTATCT
GGAGCTCATA CAATTGGTCG TTCGCACTGC GCTTCATTCA CAAACAGGCT TTACAACTTC AACAGCACAA CGGGTCAAGA CCCAAGTCTG GATCCAACGT ATGCGAATGC ACTCAAGCGA
CAATGTCCTC GAAAAAACCC CAATGGAAAT ACTGTGGTGC CAATGGACAC CATCACACCG ACTGTTTTGG ATAATGTTTA TTACGGAGAC GTTCTTTCGA ATCGGGGTTT GTTTACCTCT
GATCAGACAC TGCTCACACA ACCAGCGACT GCAAGCATGG TTATGCAGAA CTGGTTTGAC ATTTTGGAGT GGAAGAACAA GTTCAAAGCC GCCATGGTGA GGATGGGCGA GGTCGGTGTA
CTCACTGGAA GCCAGGGCGA GATTCGTTTG AATTGCCGAG TTATCAACTC TTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CACTTGAGCT TAGTTTTTCT CAAACCAGTT ATATTTATAG AAGCATTTCT GATACAACAT GCCTGCAAAA TCAGCTAGCA GAATCACGAG TATAGTGCAA AAGATATTCT TAGCATTTAC
TATATGGATT TCTCATGCTA ATTATCCTGT TAAAGCTGAC AATCTTCAAG TGGGTTTCTA TAATAGCCGC TGTAATGCAG CTGAAAGCAT AATCCAAAAT GCAGTTTCCA AGGCGTTTAT
GCAAAATCCT GGAATAGCAG CTGGTCTTAT AAGGATGCAT TTCCACGACT GCTTTGTCAA TGGATGCGAT GGATCAGTTC TGATTGATTC GACTTCAGGG AATACAGCAG AGAAGGACTC
GCCTGCAAAC AATCCCAGTC TTCGAGGCTT CGAAGTAATT GATGAGGCAA AGAAGAATTT GGAAGTAGTT TGTAAGGGGG TGGTATCATG TGCAGATATT GTAGCATTTG CAGCTCGTGA
TAGTGCAAAA CTGGCGGGTG AAGTGAGTTG GGATGTTCCA GCAGGCAGAA GAGATGGAAC GGTTTCAAAG GCTAGTGACG TCCAAGGAAA TCTGCCTCCT TCCACATTTA ATGTTAACCA
ACTGACACAA AGATTTGCAG AAAAAGGTCT CTCGCAAGAA GAAATGGTCA CATTATCTGG AGCTCATACA ATTGGTCGTT CGCACTGCGC TTCATTCACA AACAGGCTTT ACAACTTCAA
CAGCACAACG GGTCAAGACC CAAGTCTGGA TCCAACGTAT GCGAATGCAC TCAAGCGACA ATGTCCTCGA AAAAACCCCA ATGGAAATAC TGTGGTGCCA ATGGACACCA TCACACCGAC
TGTTTTGGAT AATGTTTATT ACGGAGACGT TCTTTCGAAT CGGGGTTTGT TTACCTCTGA TCAGACACTG CTCACACAAC CAGCGACTGC AAGCATGGTT ATGCAGAACT GGTTTGACAT
TTTGGAGTGG AAGAACAAGT TCAAAGCCGC CATGGTGAGG ATGGGCGAGG TCGGTGTACT CACTGGAAGC CAGGGCGAGA TTCGTTTGAA TTGCCGAGTT ATCAACTCTT GAATGAAATT
GAACCCACAT CATTTATACC ACCATTGTAA TATCGTTTAG AGGACCGTTT GTAGGTTTGA TTTGCTATTT TGATCAGTCT CCAGACGTTT TATCCGTTGT AAATGTCAGn nnnnnnnnnG
TTTTATCCGT TGTAAATGTC AGAAGGTGTC ATCCTAATTT CTGGATTTAA ATTCAGAGTC ATTCAATATG AGCGAAATAT GAGATA
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Retrieve as FASTA
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