Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
331 (306) |
| PWM (Da): |
36445.28 (33558.9) |
Transmb domain: |
i21-43o |
| PI (pH): |
5.74 (5.73) |
Peptide Signal: |
cut: 26 range:26-331 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MQCLRDCFLC EFVCVLFILR AIVNGDGVVA DDGDGLRLNF YENSCPNAER IAKQTLQQNV GRDPTAAAAL LRVSFHDCQV DGCDASILLQ SSSEMTAETI SDRNFGLRRL DILDNIKAAL
EQACPLTVSC ADIIQMAARD AVSLSGGPFI PILTGRRDGV FANNVRADKQ LPPPTVSVES MLEIFSEKNI STEDGVALLG AHTLGVGHCI NFQNRLSPQQ DPTMSPIFSA ALRMLCRVPA
PLSNITFAPN DLTNFVFDNQ YFRDIQRNRG LLTIDSEVAS DPRTAAFVFR FSQNQQHFFD RFTAAFLQLS RYRALTGNKG QIRKDCKFVN S
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and RNA seq (gba_locus_74064_iso_1_len_1480_ver_2). No EST found. |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCAGTGCC TCCGAGATTG TTTTTTGTGT GAATTTGTGT GCGTATTGTT CATTCTGCGT GCCATTGTGA ACGGAGATGG AGTTGTAGCC GACGATGGCG ATGGCCTGAG ACTTAATTTC
TATGAGAATA GCTGTCCCAA TGCAGAACGC ATTGCGAAGC AGACATTGCA GCAAAATGTA GGTCGAGATC CGACTGCAGC AGCTGCTCTT CTGCGCGTAT CGTTTCATGA TTGTCAAGTA
GATGGTTGCG ATGCATCGAT TCTTCTGCAA TCTTCTTCAG AAATGACTGC AGAGACTATT TCTGACCGTA ACTTCGGCTT AAGGCGTTTG GATATCCTGG ACAATATCAA AGCAGCTCTG
GAACAAGCCT GCCCTCTTAC AGTTTCCTGC GCTGATATCA TTCAGATGGC AGCTAGAGAT GCGGTATCCC TGTCCGGAGG GCCTTTTATA CCTATTCTGA CTGGACGACG GGACGGAGTT
TTTGCAAACA ATGTCAGAGC AGATAAACAG CTGCCCCCGC CTACTGTTTC AGTTGAAAGT ATGTTGGAGA TATTCAGTGA GAAAAACATC AGTACTGAAG ACGGCGTTGC CCTTTTAGGT
GCGCATACAT TGGGAGTTGG GCATTGCATA AACTTTCAAA ACCGGTTGAG TCCACAGCAG GATCCAACGA TGTCGCCAAT ATTCTCAGCA GCGCTAAGGA TGCTGTGCAG AGTCCCTGCA
CCGCTCTCAA ACATAACATT CGCACCCAAC GATCTGACAA ACTTCGTGTT CGATAACCAA TATTTCAGAG ACATCCAACG CAACCGCGGG CTACTGACCA TCGACTCCGA AGTGGCTTCC
GATCCCCGTA CGGCTGCCTT CGTCTTCAGG TTTTCACAAA ACCAGCAGCA CTTTTTCGAC AGATTTACCG CTGCTTTTCT CCAACTTAGC CGCTATAGGG CTCTGACTGG CAATAAAGGC
CAAATCCGAA AGGATTGCAA GTTTGTCAAC TCTTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTTGAAGCAT ATCTTCAGTG TGCTCCAGGA AGACGTTCCA GGCATTGCAG AGGGTATTGA ACGCAATCCT TAGAAAGAAT TTAGAAGCCT ATAGCACCAA TGCAGTGCCT CCGAGATTGT
TTTTTGTGTG AATTTGTGTG CGTATTGTTC ATTCTGCGTG CCATTGTGAA CGGAGATGGA GTTGTAGCCG ACGATGGCGA TGGCCTGAGA CTTAATTTCT ATGAGAATAG CTGTCCCAAT
GCAGAACGCA TTGCGAAGCA GACATTGCAG CAAAATGTAG GTCGAGATCC GACTGCAGCA GCTGCTCTTC TGCGCGTATC GTTTCATGAT TGTCAAGTAG ATGGTTGCGA TGCATCGATT
CTTCTGCAAT CTTCTTCAGA AATGACTGCA GAGACTATTT CTGACCGTAA CTTCGGCTTA AGGCGTTTGG ATATCCTGGA CAATATCAAA GCAGCTCTGG AACAAGCCTG CCCTCTTACA
GTTTCCTGCG CTGATATCAT TCAGATGGCA GCTAGAGATG CGGTATCCCT GTCCGGAGGG CCTTTTATAC CTATTCTGAC TGGACGACGG GACGGAGTTT TTGCAAACAA TGTCAGAGCA
GATAAACAGC TGCCCCCGCC TACTGTTTCA GTTGAAAGTA TGTTGGAGAT ATTCAGTGAG AAAAACATCA GTACTGAAGA CGGCGTTGCC CTTTTAGGTG CGCATACATT GGGAGTTGGG
CATTGCATAA ACTTTCAAAA CCGGTTGAGT CCACAGCAGG ATCCAACGAT GTCGCCAATA TTCTCAGCAG CGCTAAGGAT GCTGTGCAGA GTCCCTGCAC CGCTCTCAAA CATAACATTC
GCACCCAACG ATCTGACAAA CTTCGTGTTC GATAACCAAT ATTTCAGAGA CATCCAACGC AACCGCGGGC TACTGACCAT CGACTCCGAA GTGGCTTCCG ATCCCCGTAC GGCTGCCTTC
GTCTTCAGGT TTTCACAAAA CCAGCAGCAC TTTTTCGACA GATTTACCGC TGCTTTTCTC CAACTTAGCC GCTATAGGGC TCTGACTGGC AATAAAGGCC AAATCCGAAA GGATTGCAAG
TTTGTCAACT CTTGACTGTC TCAGACAGCT TGCATTAATG AACGTGAGTT AGTGCAGTTT GCATGCATAT CGCACCTGTC AATTTCTTCA TTTTTCTCCT ATTTAATTGC GACTGTGTAC
GGGTTAAGGA TTTAGTGCCG TTCTTAATAA CGGGTTGTCG GAGACACAGG TGATTTACGC TATTCAATGG TATTTTCTTA TGTAGCTATT ATTAATTGCA TTAAATGTAT TCAAAATTTG
ACCTTAGAAC AGGTAnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnATT ATACAACGAG AATCAAATTT CGTTGCCCTA TAGTTAACAC
CAAATTTAGA GTTTTTAATA TGAAAATATT TTGGTTAGGG
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Retrieve as FASTA
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