View Redoxidase 13206

Entry information : SpolPrx08 (Spipo12G0050200)

Entry ID	13206
Creation	2015-06-04 (Christophe Dunand)
Last sequence changes	2015-06-04 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2016-02-26 (Catherine Mathe)

Peroxidase information: SpolPrx08 (Spipo12G0050200)

Name (synonym)

SpolPrx08 (Spipo12G0050200)

Class

Class III peroxidase [Orthogroup: Prx026]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela

Organism

Spirodela polyrhiza (great duckweed) [TaxId: 29656 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpolPrx08 start..stop	S start..stop
LminPrx73	515	0	1..327	1..322
LminPrx72	512	0	1..327	1..322
LminPrx54	501	1.07e-180	1..327	1..322
CescPrx43	432	2.88e-153	4..327	11..338

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13206' 'join(3594885..3595106,3595198..3595377,3595522..3595687,3595764..3596179)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	3594885..3595106	220	N° 2	3595198..3595377	178	N° 3	3595522..3595687	164	N° 4	3595764..3596179	414
join(3594885..3595106,3595198..3595377,3595522..3595687,3595764..3596179)

Literature and cross-references SpolPrx08 (Spipo12G0050200)

DNA ref.	Phytozome 12: pseudo12 (3594885..3596179)
Cluster/Prediction ref.	Phytozome Gene 12: 31503206

Protein sequence: SpolPrx08 (Spipo12G0050200)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	327 (302)
PWM (Da):	34972.68 (32073.1)
PI (pH):	5.04 (4.91)	Peptide Signal:	cut: 26 range:26-327

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MNLSRPLLILFVSLASVLLWPSCCSSPDLSPYFYAASCPDVELLVKGTVQSAAALDPTLPGKLLRLLFHDCMVEGCDGSVLLQGNGTERSAPESKSLGGFQVVDAAKRLLEIFCPGTVSC
ADILVLAARDAVELTGGPSVAVPLGRRDGRVSSASSVLPNIIDTTFTLDEMLNHFSSKGLSLEDLVALSGAHTIGLAHCSAFSERFDEAPNGTWIPADASLERGYAAELARRCSGRADET
VTVGIEPGTASVFDNQYYRNVLVGKGLLGSDAQLAADSRTRRMVQDFSGNQEDFFRSWARSFLRLASVGVKTGREGEIRMSCPLRNR*

Retrieve as FASTA

Remarks

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

CAGTGATGCC CTGTGTGAGA AAAGGCTTTG GGACATGAAA TACAGGGGAG ATCAAAATTT TTATATGTGC GAGATTAGGA AAGACTTCAC AATTGATGCA ACTTTTAAAG GAAATTCTTC TCGATTTTTG AACCACAGCT GTGATCCCAA TTGTAAGCTG GAAAAATGGT ATGGCATCCT GAACTTCTGT GGTCGACACT TTTCAGCAGA CAGATTATGA AAAATCTTGC TTTTTTCTGC AACCTAAATC TCATAGATGC GTCGTTTTGA CAGTCGTATT TTTCTTCATT AGGCATGTTG ATGGAGAGAC CCGTGTTGGT GTCTTTGCAT CTCGAGCCAT AGAACCTCGT GAGCCATTGA CGTATGACTA CAGGTACTGG TTGGCTTTAC ACCGTTCCTT GGTTTTTTGG AAGCTTCTCT TTGCATTTGC AGAGATCTTA TTCTCATGCT TTTTTTCTGT TGATATTTTA AGCATCAATT TATGCTAGGG TCTATTATTT ATGTGGAGCT TGATTTTTCT AGAGTAGAAA AGATTTGTGG ATGGAGCTGA GATGTGATGC CTGTTCTCCA CAGGGATTAT CTTCTCTTAC ACACCTGTAA AAGTTATTGA AAAATATGGA ATGTAAAACC CCTGCCAGAA AAGTAGAACA GAAAAATGGT TGAATGGGCT CAATGATATT ATCATTGGTT ATAGTAATAA TACGTCTTGA TCTCAGAATT TGTGCAACTT TATTCCAGAC AAAGCCCATA AATCCTTCCC TCTCCCTACG CATTAATCTA ATACTCTTGC TTCATCATGT TTGAAAATGG AGCTTGCTGG ACAGGTCTCG CATAGTTTAA GTCTTCAGAT TCAGTTCTCT CTTGTTGGAG CTTTTTTTTT AAAAAAAAAC TGTACTCTGC GACAATTAGA TAACTGTGTC TGGGATCTCA TTAATCTTCG CTGATCTTGA TCGTTCATAG GTGGACAAGT TGACCCGCCC TCTTATATGA TTGTTTTTCC TCCAGATTTG TGCATTTTGG GCCCATGGTC AAGTGCCACT GTGGGGCTCC CAACTGCCGC GGCTACCTCG GGAGCAAGAA GAAGATCAAT GAGCTGATCC ACAAGCTGGA TCCCTGTTGG GGGTGCAAGA GGAAGAGGTC ATCATTGGCC GTCGTCCGCA AGTCAACCCG AGTTGCCACT TGACCGCCAT TCAAACCCCA TTCATTTAAT GTCTATAAGG GGACGAAGGT GAGTGGTCTA ACTCTCTCTC TCTCTCTCTC TCTCTCTCAT GCATGAAGGC AGAAACCATT CATTGACAGC GAGTTCTTCA TTTGTTTGTA CATCGCTTCC GTTCCCCCCC CCCCCCCCCC CCCGGCCGAG CATTTTCTTT GGGCCGGGGT CCTGTTGTAC CTGAAACTGT GATTTGATCG ACTGGCAAGC AAGAAATCTG AAATAAGTTG CTTACTTGTT CTACACTGCG CGTCGTCCAT GGGAGCCACC CAGATGCTGT TCGTCTTTTT GCAATAATGT CGGTCCATTG ATCGCCGGAT GCTCGTCCTC GAGCTGCTCT GGTCTGTGCA GCTAACGGCG CCGCTTGAGC CTACGGCCTG CCACGTCGCC GGATGAGGGT TACGGATTAG GGTTTCTCCT CGTAGGCATT GAAAAGTTTG ACCAGTGACT GGAAGGGCGA TGAGGGTCCC GAGGGCCTTC TTCTCTCGAC CTGTCGCCAT CTGAAGCTCT CTCGTCTGCG GAATAAGAGA ACTGTGGGGC TGAGCTGTCG AAACGGAGTG GAGAGCCCCC ATCTGGGTGA TTCCGCGGTT TCACTCGTCT CATTAATGTC ACCGTCAGAG CCAGCATGAG GCCCAATTCA TTGCCGCCAT TAAAGAGGCT GGTGAGCTCT CCCAGTCCCC ACTTCCCTAC CGCGCTCGTC TTCCTTCAAA TTCTTGCGGC CTTGTGGTCT TGCTGGCGAT GCACATTTAA ACTCAGCAGG CCTGCAGCAG AGCAGGAACC TGCGGGAGAG ATGAACCTAA GCCGGCCACT TCTTATACTC TTCGTCTCTC TCGCTTCTGT GCTCCTCTGG CCTTCTTGTT GCTCTTCTCC AGATCTTTCC CCGTATTTCT ACGCTGCGTC ATGCCCGGAT GTGGAGCTTC TGGTCAAGGG CACGGTGCAG TCTGCCGCTG CGCTGGACCC GACTCTGCCC GGCAAGCTCC TGAGGCTTCT CTTCCACGAC TGCATGGTGG AGGTAAGAAT TGGAAGCGCC GCAGGTTCTC GGAGGTCGCA GGGTGATGGG GCTCGGAAGA TGTCTTTAAT GGCCGTTGGG TCCGGTCGCG CAGGGCTGCG ATGGGTCGGT GCTGCTGCAG GGGAACGGGA CGGAGAGAAG CGCACCGGAG AGCAAGTCGC TGGGAGGGTT TCAGGTGGTG GACGCGGCCA AGCGGCTGCT GGAGATCTTC TGCCCCGGCA CCGTCTCCTG CGCTGATATC CTGGTGCTCG CCGCCAGAGA CGCCGTAGAG CTGGTGAGTC CACTCGCTGG GCAGCTTCCG GCGGTGGGTT TCCGCTCTTG TGCCACGAAT CCGTGAGGCG GAAGGAGCGT GAGGTGGGTT TCGCCATTGA TGCATGGATC GAGGTTTTAC AGCTCCGAGT GTTGTGGTCT GTGGCAGACT GGAGGGCCTT CCGTCGCCGT CCCCTTGGGC CGGAGGGACG GCCGGGTCTC GTCGGCGTCG AGCGTCCTGC CCAACATCAT CGACACCACC TTCACCCTCG ACGAGATGCT CAACCATTTC TCCTCCAAGG GTCTCTCCCT CGAAGACCTC GTCGCCCTCT CAGGTACTGG TAATCCCCGG TCATCTTCAA GCTCTGTCCT CCTCCTCGGG GAACTGATTT TCTTCTCCAA TGCCGCCAGG AGCTCACACT ATCGGGCTGG CCCACTGTAG CGCGTTCAGC GAGAGGTTCG ACGAGGCCCC CAACGGGACG TGGATCCCCG CCGACGCCTC CCTGGAGCGC GGCTACGCGG CGGAGCTGGC GCGGCGGTGC TCCGGCCGCG CCGACGAGAC CGTCACCGTC GGCATCGAGC CGGGGACCGC CTCCGTGTTC GACAACCAGT ACTACCGCAA CGTGCTGGTG GGGAAGGGCC TGCTCGGCTC CGACGCGCAG CTCGCCGCCG ATTCCCGCAC GAGGAGGATG GTGCAGGACT TCTCCGGCAA CCAGGAGGAC TTCTTCCGCA GCTGGGCGAG GTCGTTCCTG CGGCTGGCGA GCGTCGGCGT
CAAGACCGGC CGCGAGGGAG AAATCCGCAT GTCTTGTCCC CTGCGGAACC GCTGA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAACCTAAGCCGGCCACTTCTTATACTCTTCGTCTCTCTCGCTTCTGTGCTCCTCTGGCCTTCTTGTTGCTCTTCTCCAGATCTTTCCCCGTATTTCTACGCTGCGTCATGCCCGGAT
GTGGAGCTTCTGGTCAAGGGCACGGTGCAGTCTGCCGCTGCGCTGGACCCGACTCTGCCCGGCAAGCTCCTGAGGCTTCTCTTCCACGACTGCATGGTGGAGAGGTAAGAATTGGAAGCG
CCGCAGGTTCTCGGAGGTCGCAGGGTGATGGGGCTCGGAAGATGTCTTTAATGGCCGTTGGGTCCGGTCGCGCAGGGCTGCGATGGGTCGGTGCTGCTGCAGGGGAACGGGACGGAGAGA
AGCGCACCGGAGAGCAAGTCGCTGGGAGGGTTTCAGGTGGTGGACGCGGCCAAGCGGCTGCTGGAGATCTTCTGCCCCGGCACCGTCTCCTGCGCTGATATCCTGGTGCTCGCCGCCAGA
GACGCCGTAGAGCTGTGGTGAGTCCACTCGCTGGGCAGCTTCCGGCGGTGGGTTTCCGCTCTTGTGCCACGAATCCGTGAGGCGGAAGGAGCGTGAGGTGGGTTTCGCCATTGATGCATG
GATCGAGGTTTTACAGCTCCGAGTGTTGTGGTCTGTGGCAGACTGGAGGGCCTTCCGTCGCCGTCCCCTTGGGCCGGAGGGACGGCCGGGTCTCGTCGGCGTCGAGCGTCCTGCCCAACA
TCATCGACACCACCTTCACCCTCGACGAGATGCTCAACCATTTCTCCTCCAAGGGTCTCTCCCTCGAAGACCTCGTCGCCCTCTCAGAGGTACTGGTAATCCCCGGTCATCTTCAAGCTC
TGTCCTCCTCCTCGGGGAACTGATTTTCTTCTCCAATGCCGCCAGGAGCTCACACTATCGGGCTGGCCCACTGTAGCGCGTTCAGCGAGAGGTTCGACGAGGCCCCCAACGGGACGTGGA
TCCCCGCCGACGCCTCCCTGGAGCGCGGCTACGCGGCGGAGCTGGCGCGGCGGTGCTCCGGCCGCGCCGACGAGACCGTCACCGTCGGCATCGAGCCGGGGACCGCCTCCGTGTTCGACA
ACCAGTACTACCGCAACGTGCTGGTGGGGAAGGGCCTGCTCGGCTCCGACGCGCAGCTCGCCGCCGATTCCCGCACGAGGAGGATGGTGCAGGACTTCTCCGGCAACCAGGAGGACTTCT
TCCGCAGCTGGGCGAGGTCGTTCCTGCGGCTGGCGAGCGTCGGCGTCAAGACCGGCCGCGAGGGAGAAATCCGCATGTCTTGTCCCCTGCGGAACCGCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAACCTAAGCCGGCCACTTCTTATACTCTTCGTCTCTCTCGCTTCTGTGCTCCTCTGGCCTTCTTGTTGCTCTTCTCCAGATCTTTCCCCGTATTTCTACGCTGCGTCATGCCCGGAT
GTGGAGCTTCTGGTCAAGGGCACGGTGCAGTCTGCCGCTGCGCTGGACCCGACTCTGCCCGGCAAGCTCCTGAGGCTTCTCTTCCACGACTGCATGGTGGAGGGCTGCGATGGGTCGGTG
CTGCTGCAGGGGAACGGGACGGAGAGAAGCGCACCGGAGAGCAAGTCGCTGGGAGGGTTTCAGGTGGTGGACGCGGCCAAGCGGCTGCTGGAGATCTTCTGCCCCGGCACCGTCTCCTGC
GCTGATATCCTGGTGCTCGCCGCCAGAGACGCCGTAGAGCTGACTGGAGGGCCTTCCGTCGCCGTCCCCTTGGGCCGGAGGGACGGCCGGGTCTCGTCGGCGTCGAGCGTCCTGCCCAAC
ATCATCGACACCACCTTCACCCTCGACGAGATGCTCAACCATTTCTCCTCCAAGGGTCTCTCCCTCGAAGACCTCGTCGCCCTCTCAGGAGCTCACACTATCGGGCTGGCCCACTGTAGC
GCGTTCAGCGAGAGGTTCGACGAGGCCCCCAACGGGACGTGGATCCCCGCCGACGCCTCCCTGGAGCGCGGCTACGCGGCGGAGCTGGCGCGGCGGTGCTCCGGCCGCGCCGACGAGACC
GTCACCGTCGGCATCGAGCCGGGGACCGCCTCCGTGTTCGACAACCAGTACTACCGCAACGTGCTGGTGGGGAAGGGCCTGCTCGGCTCCGACGCGCAGCTCGCCGCCGATTCCCGCACG
AGGAGGATGGTGCAGGACTTCTCCGGCAACCAGGAGGACTTCTTCCGCAGCTGGGCGAGGTCGTTCCTGCGGCTGGCGAGCGTCGGCGTCAAGACCGGCCGCGAGGGAGAAATCCGCATG
TCTTGTCCCCTGCGGAACCGCTGA

Retrieve as FASTA