View Redoxidase 13209

Entry information : SpolAPx03 (Spipo23G0031500)

Entry ID	13209
Creation	2015-06-09 (Christophe Dunand)
Last sequence changes	2015-06-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2016-02-26 (Catherine Mathe)

Peroxidase information: SpolAPx03 (Spipo23G0031500)

Name (synonym)

SpolAPx03 (Spipo23G0031500)

Class

Ascorbate peroxidase [Orthogroup: APx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela

Organism

Spirodela polyrhiza (great duckweed) [TaxId: 29656 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpolAPx03 start..stop	S start..stop
LminAPx03	460	3.79e-167	1..246	1..246
LminAPx01	457	7.4e-166	1..246	1..246
CescAPx08	442	4.64e-160	1..250	1..250
GrAPx01	439	7.19e-159	1..250	1..250

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1912303..1912421	117	N° 2	1912542..1912716	173	N° 3	1912820..1912885	64	N° 4	1913660..1913708	47
N° 5	1913810..1913895	84	N° 6	1913998..1914077	78	N° 7	1914164..1914266	101	N° 8	1914380..1914438	57
N° 9	1914539..1914554	14
join(1912303..1912421,1912542..1912716,1912820..1912885,1913660..1913708,1913810 ..1913895,1913998..1914077,1914164..1914266,1914380..1914438,1914539..1914554)

Literature and cross-references SpolAPx03 (Spipo23G0031500)

DNA ref.	Phytozome 12: pseudo23 (1912303..1914554)
Cluster/Prediction ref.	Phytozome Gene 12: 31516764

Protein sequence: SpolAPx03 (Spipo23G0031500)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	250
PWM (Da):	27096.89
PI (pH):	5.02

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGKSYPTPSEEYLKAVDKATRKIRGLIAEKKCAPLLLRLAWHSAGTFDVATKTGGPFGTIRDPAELAHLANTGLDIAVRLLAPIKEEVPILSYADFYQLAGVVAVEVSGGPDIPFHPGRE
DKTTPPPEGRLPDATQGTDHLRQVFGGQMGLSDQDIVALSGGHTLGRAHKERSGFEGPWTTNPNVFDNSYFKELLAGEKEGLLQLPTDKALLNDPVFRPLVDKYAADEDAFFVDYAEAHL
KLSELGYADS*

Retrieve as FASTA

Remarks

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGCGGCAGT CAACGCAAAT CGTTGATCAG GCAAAGGGCT TCCGGCAGGG ACGCGGATGG GGTTAGGAAG GTCCCCGGAT GCATCTCCGG GTCAACCTTC TTCACTTGAA GCCGACGCGA AAACCATAAC GCGGGCCTGG ACCTTGCTGA GGACGGAGCG CGTCCACCAC CAAATCGACC CCCTTCCATG GGAAAAAAAT ATTTGACTTG GTCTCGCCAG GGCACTCGGT CTACTACTCT AATCGTGTTC CTCTCTCTCT CTCTnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nTCTCTCTCT CTCTCTCTCT CTCTCTCTCC CTCTCTCTCT CTCCTCTCTC GGTTATCGAC TACGCGCAGG GGAGGGTTCC ATTGCAGTCG GTCAATTCCG AATGCCCGCG CGGCCATGGA TGTTTTTGAC CAGGAATGGT CAGCCGTCGG CTCCTCCCGC CCACTACGGA GGACCGTACG TCACAGCTGG GGCCCATGAT GGGCTTTACC ATAAAAGAGA GGTCAACTCG CTTAAATCTT CTTCCGGATA GAATAGCGAG ATTAACCCAG TCAGGGAGGG AGGCAGGGAA CGACGGGTCG GGCCACGTCA TCCCCAAAGA AAGTGGGAGT GAGGGAGAGA AGATAAAGCC CCGGGCTGAC TTTGAGGCCC ATTTCCAGAA ACAGCAAACT GAACTGGTTA ATCATGTTGA CCGGTAGCAT TTAACCCATA ATAAGAAAGG TCATTATCGC ATGAACTGAG TCAAACTGGA CGGATGATGT CCTAATGCGG CCTAACAAAG ATTATGGTTT GGGCCCACCT CCTATATGGG CTTTATTTTT TTTAAGGCCG GACCATGCGG TTCCCCAAAT GGATCCGAAT ATCCGGTTAT TTAATTAAAA ATAAATATTA CAAGTCCGCT GATGCCACGT CTTATGTAGT GATCTACGTG GATCGCATCC ATCCATTTGA TTCTCTCCAC GTGGCGACGG ATCCTTCTCC CGCAGTGATT TTGTCCGTTC TATGCGTGAC TAATTGCAGG ATGTGATTGT AGTAGTCATC TGACCAATCG TCATCCGCAC GTGTCAAGTG CAGATTGGAT CACCGAGAGA ATCATTTGCC CCAGTCCGCG TTCACACTGG CAAAGAATTT TGTATTTATC TATTTTTTAA TTTTTAATCC CTTTATTTTT TTTACTTATG TATTTAGTCC TCAAACAGTT ATGGGCCCGG TGTTTTACAA GCGCAAATGG ATGATATAAA AGATGTTAAT TTAAATTTGA GGGCCAACGA GAGTGTATCC TTTATGACAG GATGAAAATG AAATTCCGCC CTCTGAGGTT CATTCGATCA CGGATGTACC TTGCGAGTTG CGACGGGTTG GAAGTTGGCA GCCACACGCT CGGGGCTACC CGTCACCGAG CTCTGAGAAA TCTTGACCGT CGGAATAACA TGGGCTGTAG ACCGTTGAGA TCAATCGATC GGACGGTGTT CAGCCCGTCA CCAGAAGCTT CCTCTCCAAG CTGTATAAAT TGTGATGCGG CCTCCCCTAG CAGCAGTGTT CTTTGTGTTC GTCGTCTGTC AGATATCTTC AGTGAGTGCG GCTCTTCTTC TTCTTCTTCC TCTTCCGTTT TTTCCTTAGA TCGTTCTTCC CGTAGATCGC CGTTCCGTCT GCCGATCTGG GGATCTCAGT GTATTCTGGT TTTGAAGGGA CTCCAGATCA AGTGGGGGAG ATGGGGAAGT CGTATCCGAC GCCGAGCGAG GAGTACCTGA AGGCCGTCGA CAAGGCGACG AGGAAGATCC GTGGGCTCAT CGCCGAGAAG AAATGTGCTC CTCTGTTGCT ACGTCTCGCG TAAGACTGGC TACCTGACGA TCTCTCCGTT TCGTCGAACA CCATTTCTGT CCAATCGATT TTGATCCTGA TCTACACATC TGGATATTCT TACTGCTGTT ACGATGCAAT GACCACCAGA TGGCACTCTG CGGGCACATT TGACGTGGCG ACGAAAACTG GCGGGCCGTT CGGGACCATT AGGGACCCTG CCGAGCTCGC TCACTTGGCC AACACCGGCC TCGACATAGC GGTCCGTCTG TTGGCGCCGA TCAAGGAGGA GGTCCCTATC CTCTCCTACG CCGACTTTTA TCAGGTCAGA TTTTTCGTAT ACATTTTTTT TTCCAATAGT TCTCTTGCTC TAGTATTTCT ATCCCCCACA GGAGGTCATT TTTTTGTTCA TTACTTTCCT CGAGCAGTTG GCTGGGGTGG TCGCCGTAGA GGTCTCCGGA GGACCTGATA TCCCTTTCCA TCCCGGAAGG GAGGTAAGAG ATCTCTGATA TCCTTGTTCT CTGAGAACGT AGATAGTTTC GATCCAAAAA CGTGCGATTG TTTTTTCCTT TCTGAAACCT GAAGATGCGT TGATCGTTTT TTGTTTTTCC TTCTCTCTCG AATTGTTCGT CTATTCGACA TCTATAAAAT ATTCTCAGCA TATCAATGCA AGCCTGAAGG CTCTGTGTGT ACTGTGATTT TTAATACTGG ATACTCTTTT CTTATCGCTT GTCTGCCTCT TTTCAGCCTG TTCTGATCTT TTCGGCATGT AATGATCGGA AAAAGACGCA CCACTAGTGC CTCATTTAAT CTGAATGAAT TCGTATACAC ATCTGCTCAT TTTCCCGATG TTTTTTTCTA ATTTGTGAAA ACTTACTGGA TAATTCCCAA GCAATGCGGT TCCGATCTAG CTTGTCTCTC TTCCGAAAAA CAAAAACCGT TTTCTTCCGA CAAGCAAGGC AGCGCGTCAC TTGTTCTTCT TATGTGCAAT CCTTGCAGAG TGGGAGGCAA TTCTTCTATG ATTCAGTTCC CTGTTTTCCT CTCTTGATGC TCTTTAAAAG TCGGAAGATC CTTTGTTCGC AAACCTTGCG AATTTTTCGG GGGCACTAGT AAATAGTAAT TGTTTAATAT CGTATTCCTC ACCCCCATGG GTTATCTGAT TTGATGAATT TTTACATCTG CCCTCGTTTT GTTCAATATT CGATTGCCTC TTTGCATACG AACGCAGTCT TTAAATGTCC GCTGAAGTTA TTTCCTAACG TTTTCAGGAC AAGACAACGC CCCCACCGGA GGGTCGTCTT CCAGACGCCA CTCAGGGTAA AGCGCTTCAG TTCCTCCAAC TCCCGATCGT TCCACTGGGT TTGGGTACCA GTGGCGCGGT GGATCCCAAC TCACGTGATC TTCATATTTC CACGCAGGCA CCGACCACCT AAGGCAGGTG TTCGGTGGCC AGATGGGCCT CAGCGACCAG GACATCGTTG CTCTCTCTGG AGGCCACACC CTGGTTCGTA TGACCGTCCT CACCCACCGC CACCATCCTC GTCAACCTTC CTGCCTTCCC CTGTTCCCGT CGACATAACG CGATTTTCTT TCTGCAACTT CGCAGGGTAG GGCTCACAAG GAACGTTCCG GCTTCGAGGG CCCCTGGACC ACAAACCCTA ACGTCTTCGA CAACTCCTAC TTCAAGTGAG AACGAAGCCA TTCTCCTCTG TACTTCAAAC TTCATTCTTC TTTTCCAGAA TGTAATCGGT GTTACTCTCT CTCTCTCTTA GGGAGCTCCT CGCGGGGGAG AAGGAAGGCC TTCTCCAGCT GCCAACAGAC AAAGCCCTTC TCAATGACCC CGTCTTCCGC CCCCTTGTGG ACAAATACGC GGCTGTAAGC CCCCCCGCTC TCTACGACCG CCCTTCTCAC CCTCTATGAT TCCCGCCTGC TCACCCAACT CTCTCTCTCC CTCTCTCTCT CTCTCTTCTC CATTCCTGTG CCGACAGGAC GAGGACGCCT TCTTCGTCGA CTATGCCGAA GCCCACCTGA AGCTCTCCGA ACTCGGGTAA GAACGAGTCA CCTCCTTTTC CTTCTCTTCT GCGTATGTAC GCCCGCTCTG AAGACGATCC
CCTCACCCGT CCACTTGCGC TCGTGGTCGT CGCCAGTTAT GCCGACAGCT GA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGAAGTCGTATCCGACGCCGAGCGAGGAGTACCTGAAGGCCGTCGACAAGGCGACGAGGAAGATCCGTGGGCTCATCGCCGAGAAGAAATGTGCTCCTCTGTTGCTACGTCTCGCG
CGTAAGACTGGCTACCTGACGATCTCTCCGTTTCGTCGAACACCATTTCTGTCCAATCGATTTTGATCCTGATCTACACATCTGGATATTCTTACTGCTGTTACGATGCAATGACCACCA
GATGGCACTCTGCGGGCACATTTGACGTGGCGACGAAAACTGGCGGGCCGTTCGGGACCATTAGGGACCCTGCCGAGCTCGCTCACTTGGCCAACACCGGCCTCGACATAGCGGTCCGTC
TGTTGGCGCCGATCAAGGAGGAGGTCCCTATCCTCTCCTACGCCGACTTTTATCAGAGGTCAGATTTTTCGTATACATTTTTTTTTCCAATAGTTCTCTTGCTCTAGTATTTCTATCCCC
CACAGGAGGTCATTTTTTTGTTCATTACTTTCCTCGAGCAGTTGGCTGGGGTGGTCGCCGTAGAGGTCTCCGGAGGACCTGATATCCCTTTCCATCCCGGAAGGGAGAGGTAAGAGATCT
CTGATATCCTTGTTCTCTGAGAACGTAGATAGTTTCGATCCAAAAACGTGCGATTGTTTTTTCCTTTCTGAAACCTGAAGATGCGTTGATCGTTTTTTGTTTTTCCTTCTCTCTCGAATT
GTTCGTCTATTCGACATCTATAAAATATTCTCAGCATATCAATGCAAGCCTGAAGGCTCTGTGTGTACTGTGATTTTTAATACTGGATACTCTTTTCTTATCGCTTGTCTGCCTCTTTTC
AGCCTGTTCTGATCTTTTCGGCATGTAATGATCGGAAAAAGACGCACCACTAGTGCCTCATTTAATCTGAATGAATTCGTATACACATCTGCTCATTTTCCCGATGTTTTTTTCTAATTT
GTGAAAACTTACTGGATAATTCCCAAGCAATGCGGTTCCGATCTAGCTTGTCTCTCTTCCGAAAAACAAAAACCGTTTTCTTCCGACAAGCAAGGCAGCGCGTCACTTGTTCTTCTTATG
TGCAATCCTTGCAGAGTGGGAGGCAATTCTTCTATGATTCAGTTCCCTGTTTTCCTCTCTTGATGCTCTTTAAAAGTCGGAAGATCCTTTGTTCGCAAACCTTGCGAATTTTTCGGGGGC
ACTAGTAAATAGTAATTGTTTAATATCGTATTCCTCACCCCCATGGGTTATCTGATTTGATGAATTTTTACATCTGCCCTCGTTTTGTTCAATATTCGATTGCCTCTTTGCATACGAACG
CAGTCTTTAAATGTCCGCTGAAGTTATTTCCTAACGTTTTCAGGACAAGACAACGCCCCCACCGGAGGGTCGTCTTCCAGACGCCACTCAGGGGGTAAAGCGCTTCAGTTCCTCCAACTC
CCGATCGTTCCACTGGGTTTGGGTACCAGTGGCGCGGTGGATCCCAACTCACGTGATCTTCATATTTCCACGCAGGCACCGACCACCTAAGGCAGGTGTTCGGTGGCCAGATGGGCCTCA
GCGACCAGGACATCGTTGCTCTCTCTGGAGGCCACACCCTGTGGTTCGTATGACCGTCCTCACCCACCGCCACCATCCTCGTCAACCTTCCTGCCTTCCCCTGTTCCCGTCGACATAACG
CGATTTTCTTTCTGCAACTTCGCAGGGTAGGGCTCACAAGGAACGTTCCGGCTTCGAGGGCCCCTGGACCACAAACCCTAACGTCTTCGACAACTCCTACTTCAAAAGTGAGAACGAAGC
CATTCTCCTCTGTACTTCAAACTTCATTCTTCTTTTCCAGAATGTAATCGGTGTTACTCTCTCTCTCTCTTAGGGAGCTCCTCGCGGGGGAGAAGGAAGGCCTTCTCCAGCTGCCAACAG
ACAAAGCCCTTCTCAATGACCCCGTCTTCCGCCCCCTTGTGGACAAATACGCGGCTCTGTAAGCCCCCCCGCTCTCTACGACCGCCCTTCTCACCCTCTATGATTCCCGCCTGCTCACCC
AACTCTCTCTCTCCCTCTCTCTCTCTCTCTTCTCCATTCCTGTGCCGACAGGACGAGGACGCCTTCTTCGTCGACTATGCCGAAGCCCACCTGAAGCTCTCCGAACTCGGGGGTAAGAAC
GAGTCACCTCCTTTTCCTTCTCTTCTGCGTATGTACGCCCGCTCTGAAGACGATCCCCTCACCCGTCCACTTGCGCTCGTGGTCGTCGCCAGTTATGCCGACAGCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGGAAGTCGTATCCGACGCCGAGCGAGGAGTACCTGAAGGCCGTCGACAAGGCGACGAGGAAGATCCGTGGGCTCATCGCCGAGAAGAAATGTGCTCCTCTGTTGCTACGTCTCGCA
TGGCACTCTGCGGGCACATTTGACGTGGCGACGAAAACTGGCGGGCCGTTCGGGACCATTAGGGACCCTGCCGAGCTCGCTCACTTGGCCAACACCGGCCTCGACATAGCGGTCCGTCTG
TTGGCGCCGATCAAGGAGGAGGTCCCTATCCTCTCCTACGCCGACTTTTATCAGTTGGCTGGGGTGGTCGCCGTAGAGGTCTCCGGAGGACCTGATATCCCTTTCCATCCCGGAAGGGAG
GACAAGACAACGCCCCCACCGGAGGGTCGTCTTCCAGACGCCACTCAGGGCACCGACCACCTAAGGCAGGTGTTCGGTGGCCAGATGGGCCTCAGCGACCAGGACATCGTTGCTCTCTCT
GGAGGCCACACCCTGGGTAGGGCTCACAAGGAACGTTCCGGCTTCGAGGGCCCCTGGACCACAAACCCTAACGTCTTCGACAACTCCTACTTCAAGGAGCTCCTCGCGGGGGAGAAGGAA
GGCCTTCTCCAGCTGCCAACAGACAAAGCCCTTCTCAATGACCCCGTCTTCCGCCCCCTTGTGGACAAATACGCGGCTGACGAGGACGCCTTCTTCGTCGACTATGCCGAAGCCCACCTG
AAGCTCTCCGAACTCGGTTATGCCGACAGCTGA

Retrieve as FASTA