View Redoxidase 13225

Entry information : SpolPrx24 ( Spipo6G0030200)

Entry ID	13225
Creation	2015-06-09 (Christophe Dunand)
Last sequence changes	2015-06-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2016-02-25 (Catherine Mathe)

Peroxidase information: SpolPrx24 ( Spipo6G0030200)

Name (synonym)

SpolPrx24 ( Spipo6G0030200)

Class

Class III peroxidase [Orthogroup: Prx250]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela

Organism

Spirodela polyrhiza (great duckweed) [TaxId: 29656 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpolPrx24 start..stop	S start..stop
SpolPrx19	589	0	5..326	1..322
SpolPrx23	531	0	1..293	1..293
LminPrx62	515	0	1..325	1..325
LminPrx64	514	0	1..323	1..323

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13225' 'complement(join(2734430..2735188,2735319..2735537))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2735319..2735537	217	N° 2	2734430..2735188	757
complement(join(2734430..2735188,2735319..2735537))

Literature and cross-references SpolPrx24 ( Spipo6G0030200)

DNA ref.	Phytozome 12: pseudo6 (2735537..2734430)
Cluster/Prediction ref.	Phytozome Gene 12: 31506125

Protein sequence: SpolPrx24 ( Spipo6G0030200)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	325 (301)
PWM (Da):	35219.6 (32601.3)	Transmb domain:	i7-24o
PI (pH):	8.05 (8.00)	Peptide Signal:	cut: 25 range:25-325

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MLRTMCGCCIVFLLAFQAVAPAAASHSLKVGFYKNSCPQAQNVVRDVVSNALAANKGIGAGLIRLHFHDCFVRGCDASVLLEGSDSERMNRANINSLRGFEVVEQAKDLLESQCPNTVSC
ADVLAFAARDAAEFLGGFRYQVPAGRRDGTVSRNSDADVLPGPRDSAEVLRESFENKGLSLEDMVALSGAHSLGVSHCPTFSNRLYNFNATHPQDPSMDADLADYLKERCPPPGTDRTTV
SLDLATPNRLDVQYYRNLQRGRGLLTSDQTLWTSPITADKVASFAKKPNRWAKKYAAAMVRMGAIDVLTGNKGEIRVKCAVVNGH*

Retrieve as FASTA

Remarks

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnCTCAACCT TTAAAAATTG AACTATTATA ATGTCGACGA TTCTATGACC AGTGAGATCA TTGGTCAAAG AACCAAGGCA CCGATTGGAA CAAGTCAGGC TCCTCCTGCA CACGTTTTGA TCGCCCATAT TCTTGAAGCG TGAAACGAAG AGGTCAAAAA TGTCTTCCTA GAGGCATCGA TAAATAAGGC TCCATTGATT GATTAGGAGT CATCTCACCT CTCGACTCAC ACCTCTCATA TCACCATTCT CCGAGCTCCA CCAACCTCTA TCCCCCTCGC TCACCTCTTT TTCGGAGGGA ACGCTCAAGA ACCGGGAAAC CCAGCACGAC AGGAAGAGGC TGAAGGGGAC TTGTGGAGCA ATGCTGCGAA CCATGTGCGG ATGCTGCATC GTGTTCCTGC TGGCCTTCCA GGCCGTGGCT CCCGCAGCTG CCTCGCATTC TCTGAAGGTG GGGTTTTACA AGAACAGCTG CCCCCAGGCA CAGAACGTCG TCAGAGACGT CGTGAGCAAC GCCCTCGCCG CCAACAAGGG GATAGGCGCG GGACTTATCA GGCTGCACTT TCACGACTGC TTCGTCAGGG TACGCTACCG CCGCCTTTCT TCCTTCGTCC GTCTACTCAA AATGCGTCTC ATCTGAAGAC GCTCCGTACA ACATCTTGTA CCCACCGGAC TTGTCGACGT CTGACTCTCC TACGTAAATT TGCGAACAGG GATGTGACGC CTCCGTTCTG CTGGAAGGCA GCGACTCGGA GAGAATGAAT CGCGCCAACA TAAACAGCCT GCGGGGTTTC GAGGTGGTCG AGCAGGCCAA GGATCTCCTG GAATCGCAGT GCCCCAATAC GGTGTCATGC GCCGACGTCC TGGCCTTCGC CGCCCGCGAC GCCGCGGAAT TCTTAGGCGG TTTCCGCTAC CAGGTCCCGG CGGGAAGGCG GGATGGGACG GTATCCCGGA ACTCCGACGC CGACGTCCTT CCGGGGCCCA GGGATAGTGC CGAGGTCCTC CGTGAAAGCT TCGAGAACAA GGGGTTATCG CTAGAAGACA TGGTGGCGCT CTCCGGCGCT CACTCTCTCG GCGTCTCCCA CTGCCCGACC TTCTCCAACA GGCTGTACAA CTTCAACGCC ACCCACCCGC AGGATCCCTC CATGGACGCC GACCTTGCCG ACTACCTCAA GGAGCGGTGC CCGCCTCCGG GAACCGACCG CACCACCGTG TCCCTGGACC TCGCCACACC GAATCGCCTG GACGTCCAGT ACTACAGAAA CCTGCAGAGG GGGAGGGGGC TGCTCACCTC CGACCAGACG CTGTGGACCA GCCCTATAAC GGCGGACAAG GTGGCGTCGT TCGCCAAGAA GCCCAACCGC
TGGGCGAAGA AGTACGCGGC CGCCATGGTG CGGATGGGTG CCATCGACGT GCTGACTGGG AACAAGGGCG AGATCAGGGT CAAGTGCGCT GTGGTGAACG GCCACTAA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTGCGAACCATGTGCGGATGCTGCATCGTGTTCCTGCTGGCCTTCCAGGCCGTGGCTCCCGCAGCTGCCTCGCATTCTCTGAAGGTGGGGTTTTACAAGAACAGCTGCCCCCAGGCA
CAGAACGTCGTCAGAGACGTCGTGAGCAACGCCCTCGCCGCCAACAAGGGGATAGGCGCGGGACTTATCAGGCTGCACTTTCACGACTGCTTCGTCAGGGTACGCTACCGCCGCCTTTCT
TCCTTCGTCCGTCTACTCAAAATGCGTCTCATCTGAAGACGCTCCGTACAACATCTTGTACCCACCGGACTTGTCGACGTCTGACTCTCCTACGTAAATTTGCGAACAGGGGGATGTGAC
GCCTCCGTTCTGCTGGAAGGCAGCGACTCGGAGAGAATGAATCGCGCCAACATAAACAGCCTGCGGGGTTTCGAGGTGGTCGAGCAGGCCAAGGATCTCCTGGAATCGCAGTGCCCCAAT
ACGGTGTCATGCGCCGACGTCCTGGCCTTCGCCGCCCGCGACGCCGCGGAATTCTTAGGCGGTTTCCGCTACCAGGTCCCGGCGGGAAGGCGGGATGGGACGGTATCCCGGAACTCCGAC
GCCGACGTCCTTCCGGGGCCCAGGGATAGTGCCGAGGTCCTCCGTGAAAGCTTCGAGAACAAGGGGTTATCGCTAGAAGACATGGTGGCGCTCTCCGGCGCTCACTCTCTCGGCGTCTCC
CACTGCCCGACCTTCTCCAACAGGCTGTACAACTTCAACGCCACCCACCCGCAGGATCCCTCCATGGACGCCGACCTTGCCGACTACCTCAAGGAGCGGTGCCCGCCTCCGGGAACCGAC
CGCACCACCGTGTCCCTGGACCTCGCCACACCGAATCGCCTGGACGTCCAGTACTACAGAAACCTGCAGAGGGGGAGGGGGCTGCTCACCTCCGACCAGACGCTGTGGACCAGCCCTATA
ACGGCGGACAAGGTGGCGTCGTTCGCCAAGAAGCCCAACCGCTGGGCGAAGAAGTACGCGGCCGCCATGGTGCGGATGGGTGCCATCGACGTGCTGACTGGGAACAAGGGCGAGATCAGG
GTCAAGTGCGCTGTGGTGAACGGCCACTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCTGCGAACCATGTGCGGATGCTGCATCGTGTTCCTGCTGGCCTTCCAGGCCGTGGCTCCCGCAGCTGCCTCGCATTCTCTGAAGGTGGGGTTTTACAAGAACAGCTGCCCCCAGGCA
CAGAACGTCGTCAGAGACGTCGTGAGCAACGCCCTCGCCGCCAACAAGGGGATAGGCGCGGGACTTATCAGGCTGCACTTTCACGACTGCTTCGTCAGGGGATGTGACGCCTCCGTTCTG
CTGGAAGGCAGCGACTCGGAGAGAATGAATCGCGCCAACATAAACAGCCTGCGGGGTTTCGAGGTGGTCGAGCAGGCCAAGGATCTCCTGGAATCGCAGTGCCCCAATACGGTGTCATGC
GCCGACGTCCTGGCCTTCGCCGCCCGCGACGCCGCGGAATTCTTAGGCGGTTTCCGCTACCAGGTCCCGGCGGGAAGGCGGGATGGGACGGTATCCCGGAACTCCGACGCCGACGTCCTT
CCGGGGCCCAGGGATAGTGCCGAGGTCCTCCGTGAAAGCTTCGAGAACAAGGGGTTATCGCTAGAAGACATGGTGGCGCTCTCCGGCGCTCACTCTCTCGGCGTCTCCCACTGCCCGACC
TTCTCCAACAGGCTGTACAACTTCAACGCCACCCACCCGCAGGATCCCTCCATGGACGCCGACCTTGCCGACTACCTCAAGGAGCGGTGCCCGCCTCCGGGAACCGACCGCACCACCGTG
TCCCTGGACCTCGCCACACCGAATCGCCTGGACGTCCAGTACTACAGAAACCTGCAGAGGGGGAGGGGGCTGCTCACCTCCGACCAGACGCTGTGGACCAGCCCTATAACGGCGGACAAG
GTGGCGTCGTTCGCCAAGAAGCCCAACCGCTGGGCGAAGAAGTACGCGGCCGCCATGGTGCGGATGGGTGCCATCGACGTGCTGACTGGGAACAAGGGCGAGATCAGGGTCAAGTGCGCT
GTGGTGAACGGCCACTAA

Retrieve as FASTA