View Redoxidase 13233

Entry information : SpolPrx31 ( Spipo2G0096700)

Entry ID	13233
Creation	2015-06-09 (Christophe Dunand)
Last sequence changes	2015-06-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2016-03-18 (Catherine Mathe)

Peroxidase information: SpolPrx31 ( Spipo2G0096700)

Name (synonym)

SpolPrx31 ( Spipo2G0096700)

Class

Class III peroxidase [Orthogroup: Prx009]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela

Organism

Spirodela polyrhiza (great duckweed) [TaxId: 29656 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpolPrx31 start..stop	S start..stop
CescPrx05	562	0	7..329	6..329
LminPrx39	561	0	23..329	23..329
LminPrx48	559	0	23..329	20..326
LminPrx47	558	0	23..329	20..326

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13233' 'join(6898503..6898721,6898796..6898996,6899098..6899263,6899979..6900385)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	6898503..6898721	217	N° 2	6898796..6898996	199	N° 3	6899098..6899263	164	N° 4	6899979..6900385	405
join(6898503..6898721,6898796..6898996,6899098..6899263,6899979..6900385)

Literature and cross-references SpolPrx31 ( Spipo2G0096700)

DNA ref.	Phytozome 12: pseudo2 (6898503..6900385)
Cluster/Prediction ref.	Phytozome Gene 12: 31510347

Protein sequence: SpolPrx31 ( Spipo2G0096700)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	330 (304)
PWM (Da):	35350.95 (32919.6)	Transmb domain:	i5-27o
PI (pH):	9.15 (9.12)	Peptide Signal:	cut: 27 range:27-330

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGKPGVVAAALLAALSVCLLSVPAAAQLRRDYYASTCPNVENIVRGVVQTKFRQTFVTVPATLRLFFHDCFVEGCDASVMVASSGSNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPQC
RNKVSCADILALATRDVVALSGGPSYAVELGRLDGLRSTASSVNGKLPQPTFNLNQLTSMFAANGLSQTDMIALSAAHTLGFSHCSKFSKRIYSFSSRNPVDPTLNRTYAAQLQAMCPRN
VDPRIAIDMDPVTPRTFDNVYFKNLQQGLGLFSSDQVLHTDTRSRPTVNAWAQNSAAFERAFVTAMTKLGRVGVKTGSRGNIRTRCDILG*

Retrieve as FASTA

Remarks

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TGTGTTCCCG TCGGAACCTC GCTTGCGCGT ACCGAAGTGG ACTGAATAAT TGAGTCATTT ATTACGGAGA AACGAAGCAC GTTAATACAA ATATCGCGCG GAACCAGCTG GGTTGTTCTG ATTTTTTGCG ACCAGCGTGG GAATCAGTAT ACGCTACGAA CGAGGAAGGT GGATTCTCAT GTTCCAGGAG AAGAAAATAG TCAAAACGAT GTGGGTGATC AGCTCCTCGT ATCAAGTGAT CGTGAACTCG TGCCAAGCTA AATAATTCCA TGAATATCTG GTTTTTATAT TCGTTTTTTT CCCGATAAAT GCTAATCGTG AGCAAAATTT CATCCGTTTG GGTGTGTTTT CGCGAGTACA ATTTGAGCTC TCTTTAACTT AGCTTTGTTT ATATCTTGTA GGTTTTTCAA ACCGTTCTAA ACATATCACA TTGCGATAAA ATCTTTGACC CGATAATGAC ATCTGTCTTA TTACATCTAA TCCACGTTCT CTCTCCCCCT CCCCTCTCTC TATCTATATT TATATATACG TATGCATGTA TGTACATTAA GTCCGAAGGA AATGTGATTT GAAATCAACG TAGTCGAAGA AGAACGTGTA AACCCACCGG GGTCTTAGAG CGTCGCTCAA GAGTGGATAT CGCCGGAACA AGCCGGACTC GAGAGGAACG CATGCATAGA TATTTATATC AACACACGTA TACACGCGCC CACACTATCA CAATGTGTAT AAGTATAGAC TCTAGTGATC GGAGCCGCAC TACTAAAGTC GTCTGGTCCC TGGAATATAT GTCTTTGATC CAATCTATTA CGATATTCCC AGCGCGTCTG CTTTGTCACA TTCGTCTCAT GAACAGGAAG GACTCCACGG TGGAGAAGAT TCGTCTCATG AAAGCTAACA TCCATGGAGG CAAAGATTCG CGCTTGCTGC TAGAGCGACA GCCAAACGAG AAAAGAGGGG CCGATGATGG TGCTTCACTT GAAGGAAGAC AGTGTCCCTT CGCCCTCCCT TCTTCTTCAG GCTTCCTGGA TCTTCCGCTT TTATTCCTCT CAACGTTGTT TCATTTAGAT GGGCATATTC CTCTTCCTGC ACGCTGCAAA CCCCGTCATC AAATCCATGC TAACTTGATC CTCTCTCTCT TTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTTT CTGTGGGGGG AGATCCAAAG AGAGGCTAGC GCAGTCCAAG CTTATCGAAA GAAGTGGTAA GGTGATACAA GGCCAGATGA TGGGTGTTTA AATGCCCGGC AATTACGCAA CCTTGGCCTA ATATTAAAGA GCTGTGGTAC TTCGAGAGAA ACTTGCAGGG TCCCCAGGTA GCCTCCTAAA CTCATTTAAA GCATCGATCC GACGGTGATA GTGAGAGCTC TCTAGTGGAA TGACTGAAAC AGGATTTTCA CGCGTGTGGG TCTGGCTTCT GCTGAAAGAG GGGAGAGTTT TGTTCAACCC ATCTCGGTGT TTGATAAAAT GCTTGCTTCG CGGACAAATC CGCCTACTTC CCAGCTATGA TTTTCAGTAT AGCAAATAGA AGTCGTCGTC GAGCTGCCAG CTGCCTCTTG TTGACTCGTT ATCGTCCTAG TGCGGACGAA TAGGCGGCCG GCGGGGAGAA GGATTCGGTC ACCGTCATGC GGAGTGAATG GATATCGGGC TCGTCAAAGC TTCGTGCAAT GGAAGCCAGT CTGATCGGGG AAGGGGAGTA GTTGAGTCCC TTGCCTCTCC ACGCCTTCTC TCCTCTAACT AGTCTCCATC GAGGTCCGTG GCTTCTTGAA ATTTTTAAGA GACAACTGGC TGGATAGCCC CACATCCAAC GCACCTAGTG GGGTCGCCCC ACCACCTATA TATTCAGCCC CGCCTTCCCT CTCTTCCGCT CCCCATCTGT ACCCATCAAA ATCAAGTAGT CCACCTCCTC TCTCTGCCTC CCCCTTTCCC CCCTCCCCCG GTTCTTTCTA CTGATAGCAA ATGGGTAAAC CCGGGGTGGT GGCCGCGGCG CTTCTGGCCG CGCTGAGCGT TTGCCTCCTT TCAGTACCGG CCGCGGCGCA GCTCCGGCGG GACTACTACG CCAGCACATG CCCCAACGTG GAGAACATCG TGAGGGGCGT GGTGCAGACC AAGTTTCGGC AAACCTTTGT CACCGTCCCT GCGACCCTCA GGCTCTTCTT CCACGACTGC TTCGTCGAGG TCGGAAACAA CTACACGGCC GCATTCGCAT CCAGCCTGAG CCATTATGTC GGTGCTAACC GCGTGGATTT CAGGGCTGTG ATGCGTCCGT CATGGTGGCG TCCTCGGGGT CCAACACCGC CGAGAAGGAC CACCCGGACA ACCTATCTCT GGCTGGAGAC GGGTTCGACA CTGTAATCAA GGCAAAGGCC GCCGTCGACG CCGTGCCGCA GTGCCGGAAC AAGGTCTCCT GCGCCGACAT CCTCGCCCTC GCAACGCGTG ACGTCGTTGC TCTGGTCTGT TTCCCCCCAT TTGCTTTCAT CCTCTTCCTT TCCCTGCTGC CGCTGAAAGG AGTTCTGATG GGTTGTCTCA ACTTCATTTT CGCAATGGGG AGCAGTCCGG CGGCCCTTCG TATGCAGTGG AGCTGGGCAG ACTAGACGGC CTCCGCTCGA CGGCGTCTAG CGTAAACGGG AAGCTCCCCC AGCCTACCTT CAACCTCAAT CAGCTCACCT CCATGTTCGC CGCCAACGGC CTCTCTCAGA CTGACATGAT CGCGCTCTCA GGTACTAGTC CAGTTCTTCT CTCATAGAGC CCGAGCCCCT CCCCCTTCTA CCGGCGGCGT GCTTCCTCGC CGTCCTCGGG AGAAGGATCA GCTGCTCAGC TGAGATGTCA TTTTCATGAG GCCCGGATTT TTAGGTCTAT CTCCATGAAA AATGACGACT TTTACAGCCT CTCCGCCCCT CAGAAGCCAT TGATCCATTC AATCAGGGCT TCTCTCCTGG TTTACGCGTA AAACCCTGCT ACGACCTTTG AATAACTTAT TATTTAATTA TTTTTCGTGA GTCCTACCCC TCCTTGTTTC CCACTCCCCC ATTTAGTTCT TTAAAGCGAC ATATTTCGTC CTCATCCACT AATTTCACAC GACAAGCTCG TGAATTAGAC AAAGAAACGA TCTTGAGGCT CTTCTTGCAT TTCGAGCCTC TTCCTTGATT GAGATGTTGA TAAGGCCCGT CTATTATGTG ATTCTCTTTA ATTTATTGTA CGCGGAAAAG GGCACAGAGG TCAATCCAGA CTTTTTAAAA AGGGTTTAAT CAATTATGGT TTTCCTACAT GTTCTTGATC TTGTGGGGCC GTCCTCAGGA TCCTCAGAAG GAATGAACCT TTTTTTACCC AAGTTTTGTT TTTTTTTTTA ATTCAGTCGC GGTGGAGACC ATGGTTACCG CCCGTCTTGG TTTCCGTTGC CCTGTCTGAG CCGTGCATCT GGTTGGAAAC CTGCAGCGGC GCACACTCTG GGATTCTCAC ACTGCAGCAA GTTCTCAAAG CGCATCTACA GCTTCAGCTC AAGGAACCCG GTGGACCCGA CGCTGAACAG GACCTACGCG GCGCAGCTGC AGGCCATGTG CCCGCGCAAC GTCGACCCCA GGATCGCCAT CGACATGGAC CCCGTCACCC CGAGGACCTT CGACAATGTC TACTTCAAGA ACCTCCAGCA AGGGTTGGGC CTCTTCTCCT CCGATCAGGT CCTCCATACC GACACCCGTT CCCGCCCCAC TGTCAACGCC TGGGCCCAGA ACTCTGCAGC CTTCGAACGG GCCTTCGTCA CCGCCATGAC CAAGCTCGGC CGCGTCGGCG TCAAGACTGG
GTCGCGGGGG AACATCAGAA CCCGGTGCGA TATCCTCGGC TAG

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGTAAACCCGGGGTGGTGGCCGCGGCGCTTCTGGCCGCGCTGAGCGTTTGCCTCCTTTCAGTACCGGCCGCGGCGCAGCTCCGGCGGGACTACTACGCCAGCACATGCCCCAACGTG
GAGAACATCGTGAGGGGCGTGGTGCAGACCAAGTTTCGGCAAACCTTTGTCACCGTCCCTGCGACCCTCAGGCTCTTCTTCCACGACTGCTTCGTCGAGAGGTCGGAAACAACTACACGG
CCGCATTCGCATCCAGCCTGAGCCATTATGTCGGTGCTAACCGCGTGGATTTCAGGGCTGTGATGCGTCCGTCATGGTGGCGTCCTCGGGGTCCAACACCGCCGAGAAGGACCACCCGGA
CAACCTATCTCTGGCTGGAGACGGGTTCGACACTGTAATCAAGGCAAAGGCCGCCGTCGACGCCGTGCCGCAGTGCCGGAACAAGGTCTCCTGCGCCGACATCCTCGCCCTCGCAACGCG
TGACGTCGTTGCTCTGTGGTCTGTTTCCCCCCATTTGCTTTCATCCTCTTCCTTTCCCTGCTGCCGCTGAAAGGAGTTCTGATGGGTTGTCTCAACTTCATTTTCGCAATGGGGAGCAGT
CCGGCGGCCCTTCGTATGCAGTGGAGCTGGGCAGACTAGACGGCCTCCGCTCGACGGCGTCTAGCGTAAACGGGAAGCTCCCCCAGCCTACCTTCAACCTCAATCAGCTCACCTCCATGT
TCGCCGCCAACGGCCTCTCTCAGACTGACATGATCGCGCTCTCAGAGGTACTAGTCCAGTTCTTCTCTCATAGAGCCCGAGCCCCTCCCCCTTCTACCGGCGGCGTGCTTCCTCGCCGTC
CTCGGGAGAAGGATCAGCTGCTCAGCTGAGATGTCATTTTCATGAGGCCCGGATTTTTAGGTCTATCTCCATGAAAAATGACGACTTTTACAGCCTCTCCGCCCCTCAGAAGCCATTGAT
CCATTCAATCAGGGCTTCTCTCCTGGTTTACGCGTAAAACCCTGCTACGACCTTTGAATAACTTATTATTTAATTATTTTTCGTGAGTCCTACCCCTCCTTGTTTCCCACTCCCCCATTT
AGTTCTTTAAAGCGACATATTTCGTCCTCATCCACTAATTTCACACGACAAGCTCGTGAATTAGACAAAGAAACGATCTTGAGGCTCTTCTTGCATTTCGAGCCTCTTCCTTGATTGAGA
TGTTGATAAGGCCCGTCTATTATGTGATTCTCTTTAATTTATTGTACGCGGAAAAGGGCACAGAGGTCAATCCAGACTTTTTAAAAAGGGTTTAATCAATTATGGTTTTCCTACATGTTC
TTGATCTTGTGGGGCCGTCCTCAGGATCCTCAGAAGGAATGAACCTTTTTTTACCCAAGTTTTGTTTTTTTTTTTAATTCAGTCGCGGTGGAGACCATGGTTACCGCCCGTCTTGGTTTC
CGTTGCCCTGTCTGAGCCGTGCATCTGGTTGGAAACCTGCAGCGGCGCACACTCTGGGATTCTCACACTGCAGCAAGTTCTCAAAGCGCATCTACAGCTTCAGCTCAAGGAACCCGGTGG
ACCCGACGCTGAACAGGACCTACGCGGCGCAGCTGCAGGCCATGTGCCCGCGCAACGTCGACCCCAGGATCGCCATCGACATGGACCCCGTCACCCCGAGGACCTTCGACAATGTCTACT
TCAAGAACCTCCAGCAAGGGTTGGGCCTCTTCTCCTCCGATCAGGTCCTCCATACCGACACCCGTTCCCGCCCCACTGTCAACGCCTGGGCCCAGAACTCTGCAGCCTTCGAACGGGCCT
TCGTCACCGCCATGACCAAGCTCGGCCGCGTCGGCGTCAAGACTGGGTCGCGGGGGAACATCAGAACCCGGTGCGATATCCTCGGCTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA