View Redoxidase 13236

Entry information : SpolPrx34 (Spipo3G0001300)

Entry ID	13236
Creation	2015-06-09 (Christophe Dunand)
Last sequence changes	2015-06-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2016-02-24 (Catherine Mathe)

Peroxidase information: SpolPrx34 (Spipo3G0001300)

Name (synonym)

SpolPrx34 (Spipo3G0001300)

Class

Class III peroxidase [Orthogroup: Prx006]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela

Organism

Spirodela polyrhiza (great duckweed) [TaxId: 29656 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpolPrx34 start..stop	S start..stop
SpolPrx37	493	1.87e-177	1..319	12..328
NnPrx73	488	1.19e-175	1..318	3..321
NnPrx45	487	2.23e-175	14..318	14..320
MePrx27	485	1.91e-174	12..318	16..326

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13236' 'complement(join(82651..83036,83196..83361,83440..83631,83724..83936))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	83724..83936	211	N° 2	83440..83631	190	N° 3	83196..83361	164	N° 4	82651..83036	384
complement(join(82651..83036,83196..83361,83440..83631,83724..83936))

Literature and cross-references SpolPrx34 (Spipo3G0001300)

DNA ref.	Phytozome 12: pseudo3 (83936..82651)
Cluster/Prediction ref.	Phytozome Gene 12: 31508096

Protein sequence: SpolPrx34 (Spipo3G0001300)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	318 (294)
PWM (Da):	34617.78 (32213.5)	Transmb domain:	i7-29o
PI (pH):	10.09 (9.96)	Peptide Signal:	cut: 25 range:25-318

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASSSKAAVLSLALVLVFLGSSSAQLSTGFYSSSCPSLFSTVKPVVRSALSGERRLGASVVRLFFHDCFVNGCDGSLLLDDTSRFTGEKTARPNLNSVRGFEVIDRIKERVEKVCPGVVS
CADILTIAARDSVEILGGPSWHVKLGRRDSRRASLDAANRDIPPPTADLSTLISSFRSKGLSVRDLVALSGSHTIGQARCTTFRNRIYNETNIDRSFARQRRANCGRTSGDNNLAPLDLQ
TPNGFDNNYFKNLIKQKGLLHSDQELFNGGSTDSLVRTYVKNPHAFESDFAAAMIKMGDISPLTGSRGEIRKNCRRIN*

Retrieve as FASTA

Remarks

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AATAATGTAT TATATTGTGT AGTGCAAAAG TATTGGGATG TATTGATGAG TGGAGCAGAA AATTTATAAA CTCAAGTTTC AGTTTTGTTC TATTCAGATA CGTAATATAG CATAAATAAA TATTTGTCCC ATGTGAAACA AATTTTAATA GCTTGCAGTT TAAGATCACT ATTATTTTTT ATATTCTATT AAGGTCATGG ATAATACAGG CTAAAATGAG AAGGATAGGC TTATTTGTCA TGTTATAAGG TTTTTTTGTT CTTCCTATTT CTGAAGAATA ATTATAGTAA GACAATCTTT TTAAGATTTG AACAACAGTA GATGAAACAT AGGAGTGGTG ATGGTTGGGT TAATACAGTT TGCCTAACTG AAAAGTTCCC TCACCCATAT GAACGGTTCC ACGACTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCGCTCTAA GCGCCTAATT CCCCATGGTC AGACATCTCT TAGGTCTGGA TCAGATTTGT TAATACCATG GTATGGCAGT TAATGGAGTA TATTGGTGCC TCTTAGGCAA GAAATTTATG GAGGTAAGAA TGTAATAAAT AATTCCATAT TTCATGCTAG TTTCATCTTA CTTACGCTGT GATTGTAACA TTTATGGTTC CTAACCTTTT TGTCCCTAGA ACATTCACAT CAAAGGTAAA TTTAACCCAC ATTAAAATCC CAATAAAATT ATACACGGTA AATAATGAAT ATTTAATTCT TAAAATAGTT AAACTTAATG TAATTATATC AATCATAATG ATATTTAAAA TTTAGAAACA TCTTAATAAC CGATTTAATA TATTTTTAGT AACCGTAATT GGTGATATTA TTTTCATTCA CATTTGTGCT AAAAAAAAAC TCAATTACTT GGTAGACCTA CCCAAGCACG ACAAATGAGA GGGAGAGGGG GCGAGGAAGA GTAGGGGAAT AGTCCGTGAC GATCCGAACT TTTCTTTGGA CCCCAAAAGT CCGTTGAGGT TCCTTTCTGT ACTTCATTTC GGGCCAGTCC GAAGGCTATA ATTGGCCGGG TCGGACTCAT GGTTGCGTGT CTCATCCATT TCTCCAGGTC GGCGTACGTC TGTATTTGGT CTTTCCGGCC ATATTTAAAG TTCCTCCGTC ACTGCCTACT TTAAATGTGT CTGGTACAGA TAAAACGAGG AGAAACTAAC TTTTAATAAT ATCATATTTA ATGTTTCGTG ACCGTCGTCG TCAACGACGG TTTCGCGTTA TCTGATAATT AACCCGCTTA GACGACAAAA AATAATAATG CCAATCGCCG TATTCATAAC CGACATGAAT CTCTCTTTTC CGATGACTAA AACGGGCACA AATGAACAGG CTCTCCACGA TCACCGCGAT ATGGAAATGG ATGATATCCG ACGCAATATT CACAAGTAGA TGTTTGTATG TTCCTAAGAA GGTTTCCCGT TACGTGCAAT GTGTGTATGA GTGTGGGGAT GAGTATACTC ACGCATACAC AGATACACAC ACACACACAC ACACACATAT ATATATATAT TTAATATAAT ACCACATATA TGTATCTGTC TTCCAGATGA TGTGGAAATA GTCAGCACGA ATCCGACTCT CATCCTACTC CGTCGACTTT CTCTTCAGGC GACCACGTCT GGGACATATA TACCACAGAT TGCTTCCGGG GATCAGTTCA ATTTGTTGAC TATTGCTTAG ATTAAACATA GATTAGAGGG ACGGTTCGGT AAGCTTGTTT GACTTATCTC CACTGACCCC ACTTCTTGAA GCGGTCGTGT GATGGAGTTG TCATCTTCTG ATCACGGTGT GCGACATACA ACCTCGTTTT GATCCCCCTA TGTGGAGAAC TAGTCTCATG GAGTAGGTGA AGACAGACTT TTCCTGCTTT TCTCCGCTAT AAATTCGAGA ACGGATGTAT CCTAATTGAA CGAGCACATC CTCTTCTTAA GATCCTCTGG TCACTGTTCA CAGAGAAACA ATGGCTTCGT CTTCCAAGGC CGCAGTCCTT TCTCTTGCTC TTGTACTTGT TTTCCTTGGG AGTTCGTCGG CTCAACTGTC CACAGGCTTC TACTCTTCGT CTTGCCCGAG CCTTTTTAGC ACCGTGAAAC CTGTCGTCCG GTCGGCGCTC TCTGGTGAGA GGCGCTTAGG GGCGTCTGTG GTCCGCCTGT TCTTCCACGA CTGCTTTGTC AACGTAATCA GTTGTCCCAC ACGCATCGCT TCCATTATCT CTTCTTGCAC TCGTACGTGT CCCGAAGACC CTATTTTTAC CGTTTAAAAC TGCAGGGTTG CGACGGATCG CTTCTTCTAG ACGACACTTC GAGATTCACC GGGGAGAAGA CCGCGAGGCC TAACCTAAAC TCAGTCAGAG GATTCGAAGT CATTGACAGG ATTAAGGAAC GAGTAGAGAA GGTGTGCCCC GGGGTAGTCT CTTGCGCCGA CATCTTGACC ATTGCTGCCA GAGATTCAGT TGAGATCGTA AGTCAGCTAC AGCTCCCTCA ACTATTGCAG TTTATATGCT CTTCTCTGGC TGACTGATGA CCATACACTG TGCAGTTAGG AGGTCCCAGT TGGCACGTGA AACTCGGAAG ACGGGACTCG AGGAGGGCGA GCCTGGACGC TGCCAACAGG GATATTCCCC CTCCCACCGC CGACCTTTCA ACACTTATCT CCAGTTTCCG ATCCAAGGGA CTCTCAGTTA GAGACCTGGT AGCGCTGTCA GGTATACCAA ACCTTTCTTC CTCAAGTCCC TTCGCATAGC TTATCTGACA AGCTTATGTC ATCAGATGCA TACGCAGTTT AAAGGCGTAT CTTGTACTGT ATGATGCTAT TAGCTCTTCT CACCCCTGTT CTCCGGCAAT GACCCCACCC TGGATCACAG GGTCTCACAC CATCGGGCAA GCGCGGTGTA CTACCTTCCG GAATCGCATA TACAACGAGA CCAACATCGA CAGGTCCTTC GCGAGGCAGA GGAGGGCGAA CTGCGGGAGA ACCTCTGGCG ACAACAACCT GGCTCCGCTA GACCTGCAGA CACCCAATGG CTTCGACAAC AACTACTTCA AGAACCTGAT CAAGCAGAAG GGCCTCCTCC ACTCCGACCA GGAGCTGTTC AACGGCGGCT CCACCGACTC GCTTGTCCGG ACCTACGTCA AGAATCCCCA CGCATTTGAA TCCGACTTTG CAGCCGCCAT GATTAAGATG GGCGATATCA GTCCCCTCAC
CGGCTCCAGA GGGGAGATCA GGAAGAACTG CAGGAGGATC AACTAA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCGTCTTCCAAGGCCGCAGTCCTTTCTCTTGCTCTTGTACTTGTTTTCCTTGGGAGTTCGTCGGCTCAACTGTCCACAGGCTTCTACTCTTCGTCTTGCCCGAGCCTTTTTAGC
ACCGTGAAACCTGTCGTCCGGTCGGCGCTCTCTGGTGAGAGGCGCTTAGGGGCGTCTGTGGTCCGCCTGTTCTTCCACGACTGCTTTGTCAACGTAATCAGTTGTCCCACACGCATCGCT
TCCATTATCTCTTCTTGCACTCGTACGTGTCCCGAAGACCCTATTTTTACCGTTTAAAACTGCAGGGGGTTGCGACGGATCGCTTCTTCTAGACGACACTTCGAGATTCACCGGGGAGAA
GACCGCGAGGCCTAACCTAAACTCAGTCAGAGGATTCGAAGTCATTGACAGGATTAAGGAACGAGTAGAGAAGGTGTGCCCCGGGGTAGTCTCTTGCGCCGACATCTTGACCATTGCTGC
CAGAGATTCAGTTGAGATCGTAAGTCAGCTACAGCTCCCTCAACTATTGCAGTTTATATGCTCTTCTCTGGCTGACTGATGACCATACACTGTGCAGTTTTAGGAGGTCCCAGTTGGCAC
GTGAAACTCGGAAGACGGGACTCGAGGAGGGCGAGCCTGGACGCTGCCAACAGGGATATTCCCCCTCCCACCGCCGACCTTTCAACACTTATCTCCAGTTTCCGATCCAAGGGACTCTCA
GTTAGAGACCTGGTAGCGCTGTCAGGTATACCAAACCTTTCTTCCTCAAGTCCCTTCGCATAGCTTATCTGACAAGCTTATGTCATCAGATGCATACGCAGTTTAAAGGCGTATCTTGTA
CTGTATGATGCTATTAGCTCTTCTCACCCCTGTTCTCCGGCAATGACCCCACCCTGGATCACAGGGGGTCTCACACCATCGGGCAAGCGCGGTGTACTACCTTCCGGAATCGCATATACA
ACGAGACCAACATCGACAGGTCCTTCGCGAGGCAGAGGAGGGCGAACTGCGGGAGAACCTCTGGCGACAACAACCTGGCTCCGCTAGACCTGCAGACACCCAATGGCTTCGACAACAACT
ACTTCAAGAACCTGATCAAGCAGAAGGGCCTCCTCCACTCCGACCAGGAGCTGTTCAACGGCGGCTCCACCGACTCGCTTGTCCGGACCTACGTCAAGAATCCCCACGCATTTGAATCCG
ACTTTGCAGCCGCCATGATTAAGATGGGCGATATCAGTCCCCTCACCGGCTCCAGAGGGGAGATCAGGAAGAACTGCAGGAGGATCAACTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCGTCTTCCAAGGCCGCAGTCCTTTCTCTTGCTCTTGTACTTGTTTTCCTTGGGAGTTCGTCGGCTCAACTGTCCACAGGCTTCTACTCTTCGTCTTGCCCGAGCCTTTTTAGC
ACCGTGAAACCTGTCGTCCGGTCGGCGCTCTCTGGTGAGAGGCGCTTAGGGGCGTCTGTGGTCCGCCTGTTCTTCCACGACTGCTTTGTCAACGGTTGCGACGGATCGCTTCTTCTAGAC
GACACTTCGAGATTCACCGGGGAGAAGACCGCGAGGCCTAACCTAAACTCAGTCAGAGGATTCGAAGTCATTGACAGGATTAAGGAACGAGTAGAGAAGGTGTGCCCCGGGGTAGTCTCT
TGCGCCGACATCTTGACCATTGCTGCCAGAGATTCAGTTGAGATCTTAGGAGGTCCCAGTTGGCACGTGAAACTCGGAAGACGGGACTCGAGGAGGGCGAGCCTGGACGCTGCCAACAGG
GATATTCCCCCTCCCACCGCCGACCTTTCAACACTTATCTCCAGTTTCCGATCCAAGGGACTCTCAGTTAGAGACCTGGTAGCGCTGTCAGGGTCTCACACCATCGGGCAAGCGCGGTGT
ACTACCTTCCGGAATCGCATATACAACGAGACCAACATCGACAGGTCCTTCGCGAGGCAGAGGAGGGCGAACTGCGGGAGAACCTCTGGCGACAACAACCTGGCTCCGCTAGACCTGCAG
ACACCCAATGGCTTCGACAACAACTACTTCAAGAACCTGATCAAGCAGAAGGGCCTCCTCCACTCCGACCAGGAGCTGTTCAACGGCGGCTCCACCGACTCGCTTGTCCGGACCTACGTC
AAGAATCCCCACGCATTTGAATCCGACTTTGCAGCCGCCATGATTAAGATGGGCGATATCAGTCCCCTCACCGGCTCCAGAGGGGAGATCAGGAAGAACTGCAGGAGGATCAACTAA

Retrieve as FASTA