View Redoxidase 13239

Entry information : SpolPrx36 ( Spipo0G0119900)

Entry ID	13239
Creation	2015-06-09 (Christophe Dunand)
Last sequence changes	2015-06-09 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2016-02-24 (Catherine Mathe)

Peroxidase information: SpolPrx36 ( Spipo0G0119900)

Name (synonym)

SpolPrx36 ( Spipo0G0119900)

Class

Class III peroxidase [Orthogroup: Prx014]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela

Organism

Spirodela polyrhiza (great duckweed) [TaxId: 29656 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpolPrx36 start..stop	S start..stop
CescPrx81	415	1.24e-146	14..325	19..326
CescPrx22	414	2.66e-146	14..325	19..326
NnPrx10	384	1.31e-134	8..325	7..320
NtPrx61-1A	375	2.55e-131	1..324	1..320

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13239' 'join(8260526..8260723,8260793..8260978,8261061..8261223,8261329..8261759)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	8260526..8260723	196	N° 2	8260793..8260978	184	N° 3	8261061..8261223	161	N° 4	8261329..8261759	429
join(8260526..8260723,8260793..8260978,8261061..8261223,8261329..8261759)

Literature and cross-references SpolPrx36 ( Spipo0G0119900)

DNA ref.	Phytozome 12: pseudo0 (8260526..8261759)
Cluster/Prediction ref.	Phytozome Gene 12: 31508096

Protein sequence: SpolPrx36 ( Spipo0G0119900)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	325 (312)
PWM (Da):	34346.09 (35333.9)
PI (pH):	4.78 (5.43)	Peptide Signal:	cut: 25 range:25-336

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MVWWSAGLLLALLVGSSWGKLEVGFYRQSCPAAEEIVRSVVGEATAGDPTTAAALLRLHFHDCIVQGCEGSVLIFRPDGKQENMAFGNEGLRGFDVIERAKSRLEAACPGVVSCSDILAL
AARDSIVLSNGPRYDVPTGRRDGRVSNISDGDNLPDVNDSAAVLLAKFAQKGLSDNDLVLLSAAHTIGTAACFFMNDRLYNFQGSAGPDPSISWFFLPALMETCPRGGDPNARLPLDGGG
AAGEFTFDDSILWNIAGGAAVLQSDAALYGDPSTRAIIDSYLRHRRSAVDGGFAADFAAAMVRMGRIGALTGSQGEIRRVCSSFN*

Retrieve as FASTA

Remarks

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TTTTATCTCA AATTAGATAG ATCGCCATAA ATATAAATAT CACATTCGTT AGTCAGATTA CCACATTCTT TGCTTTCTTT TTAGCCTGGC AAGTTTGAAG AAATATGACG CTGAGATGCC GATCTTCCTA GAGCGACGAT AATTACCCAA AAAATAAGTT TTTAGTAAAA TATAAGTCGC TTAATATCCA GACAAAATTA GGAACGTGAA TGAGCTCGGG CCTCCATTTT CCTTGTCCTT GTCTTGCACC AACTCTCCTC ATCACCCTTC CTCTTCCTCC TCGTTCCACA GGCCTTAGAC ACGAGAGGAT TCCACGAGGG CCTCTTCATG CAGGCGAGGA CGGAAAGATA GCCCCTTGAT CATCGCCCTC CGACGGCGCC ACCTCTATCT TCTGCTACAG CATCTCTATT GCATCCTTGG GTACTCCGGA ATCACAGCGT GGGGAGATCA CCATGTTCGA GCGGAAGGTA ATTCACAGCA AGAAGAATAG AGCCAGGCAC TCTGGAGAAG CTCTGAGCTG ATCTCCCGCG GCGTCTGTTA GATCACCCTC AGCAGCAGGT CTCTCACTCT GTCGCCGGCG ACCGCACAGT CGCCCCTCAC CTTGGTTGTT CGCGTCGAAA GGAACAAGAG AAGGCCGTCC GTCAGTTCTC CGCCGGAGGA CGAAGGTGGG GTGGGGGATC AGCGCTGAGA ATGGCCATCT CCTCACCTCC ATGCAGAGGA GAATCCGAGA GACACCGGAG AGCGTGAAGA AGTTGACGCC GGTCACCTCC AGGCCGAGGG TGGTCATGGC TTCCGCCAGC TTCGCCAGGG CGCCCTTCCT TTTCCTGCAG ACTATGCTGG CCCCGAGCCT GTTCTTGCCG AGGGGCCTCA CCTCCACCTC CTCCTGCAAC AAGAGCTCGA GAAGCCGAGG GAGAATTAGG CCGTCGCCTG GTTCAGATGA ATGGGCCGTG GCCGGGGAGG AACCTTGCAG TCGACGGGTT CTGGCGGGGG CCTCTCCTCG GGGCTAGAGG CGCTCCCCTG GAGCTCCACT TCCGCGTCTG CTATCTCCTG CAATTCCCTC TGGAGCTCTT CCTTCCGGCC GCGAAGCTCC TGGATGTAGT CGATCGCATC GGCGAGGGTG GACTCCTTGC TCATCTGCGG GGCAAAGCGC GGTCGATCGC TAACAGCGGA GCCTAAAATG GCGGGAGCTA GGGTTTTCTC TCGCATGCCT TGGTTATCCT GGGAACCAGG GAGCGGAGAG CGAAGAACTG GCCCTTCAGC TTGGCTCTTC GCTTCCTTTC GGCCTCCAGA TTCTTCGACT TGTACACAAT CTCCGGCGTC ACGCCGCCGG GGTGCTGGGT GCGCTCGGCG GCGGCGCCGC CCAGAAGCCC CGCCACGAGG TATCCCCCGC AGTCGTGGTC GGCGGCACCC GTCCCCCACC GCTGTTGCCG CGGCATCTCC CCTCTCCAGG CGGCGCCACC AGCGGAGAGT CGGGCCTCTT TCTCAGGTCG CATTTGTAGA AAAGGCCGGG GATTCTCTCA TGGCGAACGG GCAGCTAGGG TTAGTTGGGC ACAAGGAGGG GAAGCACCTC CATTGCGAAC CATGGCGGTT GAGTCTGTTC CTCCGTACCG ATTCCCCTCT CTGTCCGGCT CTCTGCGAGA AGTTGATATC AGGGTTCTTC CGATCTGGAT CCAACGGTGG AGAGGGACGA TGCCTCGGCC ATCTCAGCCG CCTCGCCGAC CTCGTCTCAG TGAAATCAGG CATCCTCACC ATCAACGCTC TGCTCGGGGG GGTACTGCAG GGAGGGGAGC CTGGGCAGCG CGAAGAAGGT GTTCGACGAA TTGCCCGGAG CGGCTGCCTT ACAAATCGTG nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TAGAAGGGCC ATGGTGTGGT GGTCAGCTGG CCTGCTGCTG GCGCTCCTGG TGGGGAGCTC ATGGGGGAAA CTGGAAGTGG GGTTCTACCG GCAGAGCTGC CCCGCGGCGG AGGAGATAGT GAGGTCGGTG GTGGGGGAGG CCACCGCCGG CGACCCCACA ACGGCGGCGG CGCTGCTGCG GCTCCACTTC CACGACTGTA TCGTCCAGGT AAGCCTACGC CGCCGCCTTC CCGTCCTCGG ATGTGGGAAC GGCTGACGGT TGCTAGAATT CTCACAGGGC TGCGAGGGGT CGGTGCTGAT ATTTCGGCCG GATGGGAAGC AGGAGAACAT GGCCTTCGGC AACGAGGGGC TCCGGGGATT CGACGTCATC GAAAGGGCCA AGTCCCGGCT GGAGGCGGCC TGCCCCGGAG TCGTCTCCTG TTCCGACATT CTCGCGCTGG CGGCGCGGGA CTCTATCGTC CTGGTCAGAG ACTTCTCTAC CTTCTCTCTC TCTCTTCTCT CTTCTCTCTC TCTATCTCTC TAGGAAGGTG ACGGTATGCG AGCAGAGCAA CGGGCCGAGA TACGATGTGC CCACGGGGAG GCGTGACGGC CGGGTCTCCA ACATCTCCGA TGGGGATAAT TTGCCCGACG TGAACGATTC TGCCGCCGTT CTCCTGGCCA AGTTTGCCCA GAAGGGCCTC TCCGACAACG ACTTAGTCCT CCTCTCCGGT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CCCCCCTTTT TCTCTCTTAT TCTGGGTCTT CCTCTCCGGT CTCCTCTCTC TTAATCTTGT CCAACTCCGG CAGCGGCGCA TACGATCGGA ACGGCGGCGT GCTTCTTCAT GAATGACCGC CTGTACAACT TCCAGGGCAG CGCCGGCCCC GATCCGTCCA TCAGCTGGTT CTTCCTCCCG GCGCTCATGG AGACCTGCCC CCGTGGCGGC GACCCCAACG CCCGCCTCCC CCTCGACGGC GGCGGCGCCG CCGGCGAGTT CACCTTCGAC GACAGCATCC TCTGGAACAT CGCCGGCGGT GCCGCGGTGC TCCAGTCGGA TGCTGCCCTC TATGGCGACC CCTCCACCAG GGCCATCATC GACTCCTACC TCCGCCATCG GAGGTCCGCC
GTCGATGGGG GCTTCGCCGC CGACTTCGCG GCGGCGATGG TGAGGATGGG CCGGATCGGT GCCCTCACGG GCTCCCAGGG GGAGATCAGG CGCGTCTGCT CCTCTTTCAA CTGA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTGTGGTGGTCAGCTGGCCTGCTGCTGGCGCTCCTGGTGGGGAGCTCATGGGGGAAACTGGAAGTGGGGTTCTACCGGCAGAGCTGCCCCGCGGCGGAGGAGATAGTGAGGTCGGTG
GTGGGGGAGGCCACCGCCGGCGACCCCACAACGGCGGCGGCGCTGCTGCGGCTCCACTTCCACGACTGTATCGTCCAGAGGTAAGCCTACGCCGCCGCCTTCCCGTCCTCGGATGTGGGA
ACGGCTGACGGTTGCTAGAATTCTCACAGGGCTGCGAGGGGTCGGTGCTGATATTTCGGCCGGATGGGAAGCAGGAGAACATGGCCTTCGGCAACGAGGGGCTCCGGGGATTCGACGTCA
TCGAAAGGGCCAAGTCCCGGCTGGAGGCGGCCTGCCCCGGAGTCGTCTCCTGTTCCGACATTCTCGCGCTGGCGGCGCGGGACTCTATCGTCCTGTGGTCAGAGACTTCTCTACCTTCTC
TCTCTCTCTTCTCTCTTCTCTCTCTCTATCTCTCTAGGAAGGTGACGGTATGCGAGCAGAGCAACGGGCCGAGATACGATGTGCCCACGGGGAGGCGTGACGGCCGGGTCTCCAACATCT
CCGATGGGGATAATTTGCCCGACGTGAACGATTCTGCCGCCGTTCTCCTGGCCAAGTTTGCCCAGAAGGGCCTCTCCGACAACGACTTAGTCCTCCTCTCCGCGGTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCCCCCCTTTTTCTCTCTTATTCTGGGTCTTCCTCTCCGGTCTCCTCTCTCTTAATCTTGTCCAACTCCGGCAGCGGCGCATACGATCGGAACGGCGGCGTGCTT
CTTCATGAATGACCGCCTGTACAACTTCCAGGGCAGCGCCGGCCCCGATCCGTCCATCAGCTGGTTCTTCCTCCCGGCGCTCATGGAGACCTGCCCCCGTGGCGGCGACCCCAACGCCCG
CCTCCCCCTCGACGGCGGCGGCGCCGCCGGCGAGTTCACCTTCGACGACAGCATCCTCTGGAACATCGCCGGCGGTGCCGCGGTGCTCCAGTCGGATGCTGCCCTCTATGGCGACCCCTC
CACCAGGGCCATCATCGACTCCTACCTCCGCCATCGGAGGTCCGCCGTCGATGGGGGCTTCGCCGCCGACTTCGCGGCGGCGATGGTGAGGATGGGCCGGATCGGTGCCCTCACGGGCTC
CCAGGGGGAGATCAGGCGCGTCTGCTCCTCTTTCAACTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTGTGGTGGTCAGCTGGCCTGCTGCTGGCGCTCCTGGTGGGGAGCTCATGGGGGAAACTGGAAGTGGGGTTCTACCGGCAGAGCTGCCCCGCGGCGGAGGAGATAGTGAGGTCGGTG
GTGGGGGAGGCCACCGCCGGCGACCCCACAACGGCGGCGGCGCTGCTGCGGCTCCACTTCCACGACTGTATCGTCCAGGGCTGCGAGGGGTCGGTGCTGATATTTCGGCCGGATGGGAAG
CAGGAGAACATGGCCTTCGGCAACGAGGGGCTCCGGGGATTCGACGTCATCGAAAGGGCCAAGTCCCGGCTGGAGGCGGCCTGCCCCGGAGTCGTCTCCTGTTCCGACATTCTCGCGCTG
GCGGCGCGGGACTCTATCGTCCTGAGCAACGGGCCGAGATACGATGTGCCCACGGGGAGGCGTGACGGCCGGGTCTCCAACATCTCCGATGGGGATAATTTGCCCGACGTGAACGATTCT
GCCGCCGTTCTCCTGGCCAAGTTTGCCCAGAAGGGCCTCTCCGACAACGACTTAGTCCTCCTCTCCGCGGCGCATACGATCGGAACGGCGGCGTGCTTCTTCATGAATGACCGCCTGTAC
AACTTCCAGGGCAGCGCCGGCCCCGATCCGTCCATCAGCTGGTTCTTCCTCCCGGCGCTCATGGAGACCTGCCCCCGTGGCGGCGACCCCAACGCCCGCCTCCCCCTCGACGGCGGCGGC
GCCGCCGGCGAGTTCACCTTCGACGACAGCATCCTCTGGAACATCGCCGGCGGTGCCGCGGTGCTCCAGTCGGATGCTGCCCTCTATGGCGACCCCTCCACCAGGGCCATCATCGACTCC
TACCTCCGCCATCGGAGGTCCGCCGTCGATGGGGGCTTCGCCGCCGACTTCGCGGCGGCGATGGTGAGGATGGGCCGGATCGGTGCCCTCACGGGCTCCCAGGGGGAGATCAGGCGCGTC
TGCTCCTCTTTCAACTGA

Retrieve as FASTA