Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
243 (1086) |
| PWM (Da): |
26904.79 (112962.5) |
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| PI (pH): |
10.11 (4.98) |
Peptide Signal: |
cut: 0 range:Ymax-1085 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASSATFATI LTSAASPRES WDRRNPARPA VASSCFPSRA PAGWQQISPL NCRFAASSSR LRVNGRLMRN SGVVHATAAA EKSIHDYTVK DIDGKNVSLS KFKGKVLLVV NVASRCGLTT
SNYMELSHIY DKYKTQGFEI LAFPCNQFGF QEPGSNQEIK QFACTRFKAE FPIFDKVDVN GPFTAPVYQF LKSSAGGFLG DLIKWNFEKF LVDKNGKVVE RYPPTTSPFQ IEKSEIKLGI
RSL*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic. Incorrect prediction from Phytozome (5'end is missing). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAT CAGCGACCTT CGCCACCATC CTAACTTCCG CAGCTTCTCC CCGAGAGTCT TGGGACCGCA GGAATCCTGC TCGTCCTGCT GTGGCGTCTT CCTGTTTCCC GAGCCGAGCT
CCCGCCGGAT GGCAGCAAAT TTCGCCTCTG AACTGCAGAT TCGCCGCCTC GTCGTCTCGG CTGAGGGTAA ATGGCAGGCT AATGAGGAAT TCAGGCGTGG TTCATGCTAC GGCCGCTGCG
GAGAAGTCCA TCCACGATTA CACCGTCAAG GTTGGATGGG ATCTCGTTGG CTCTGTTTTT TTTTGCCATC TCTCCCTCTC CGTCTATTTA TATCGCATAC GAATTATTTT TGTGCTTATG
AGTGAGAAAT TTTGATCAGG ATATCGACGG GAAGAATGTG TCTCTTAGCA AATTCAAGGG AAAAGTGCTA CTGGTCGTCA ATGTTGCTTC AAGATGGTAA TATATCGGGT TCTTTCTGTT
ATCAGTGAGC AGTGAGCTTT AATCATACTT GGAGATTATT TTTTCGCTGC ATTCTCATAG AGCAAATGTT TGATTCTCAA TGCCAGTGGC TTAACAACAT CCAATTACAT GGAGCTTTCA
CACATCTACG ACAAGTACAA GACTCAAGGT AGCAAACGCC CTAGGATTTT TTTCTTTTTT CTGTTGAAAA TGATGGGCAT TAATGAACTA GAAGCGATGA ATGTAACCAA GCCTCAGGCT
TGGAAGCTCA GCAAGGATAT AAATGGACTG GGTATCATTT GCAGGCTGTA GTTGGCCCCA ACCAAACTAC AGCCCACATA CAAGTTGTTC AACTTAGCTG AATTTGTGTT GTTTCTGTCG
ATCCTAGATC TAACCACAAA ATTAGGGCCC CAATCCAAGT CTAACGCTGC CCAAGGTTGA TCTCCACCCT GTAAATCCTT GCCGCGGAGC ACAATCAAAT GATTGTAATG GAAGTTGGGA
CAGGTCAGGC TCTGTTAAAG TTGAGAAATT TACACGGGAC GCAAGATTAA TACATCCATA TATTTACTTC AAGGTATGTT TTCAGTACAT GCACACAAAT ACATATATAC ATATCCAAGA
GGGGGTTTGA GTCAAGCTAT ACCAACCAAT TAGCTTTAAT CATCCTGTTG CGAGCTAAAA AAACCTGGCC CCAATTGAAA ATTTCGAAAA GTCAGAATCA CAGGAATTTT GCAAGAGCAT
CCTACATGAG AAATGGGCTT CTATTCTGTT AATTGGATTT GTGGTATTCC TGTTAAACAA AACTGAAACT TATTATCTTT TTGACTGAGG CATTAGCGAT TTTAAAGGGG TTCTGTGATT
TTAAATCCTG AACATTAGCT AGATGAACCA AACATGTGGA CAGTGGAGAG CTAAGTCAAA TGTGAAAATT TTCCTTTTAC TGGTATGAGA TGTCCCTAGT GTGACTTAGT AAAAGATAGA
CAAGTAAAGC CTTTGGCTTT CTCAAATATG TTAAATCTAA CGGAAAATTT TAAACTGGTT TTTGTGTATT GAAGAGTTAT CCTCTCAAAT TAGTGATGAT TTATTTTGGT TTCTGAAGTG
TCTTCTTCAA GATTATGAAC GTTAACGTGC AATGATTTGC GATGGAAAGG ATTATTTACT TGATTTAAAT GCAGGATTTG AGATTCTGGC ATTCCCTTGC AACCAATTTG GGTTTCAGGA
GCCGGGATCA AATCAAGAGA TAAAACAATT TGCTTGCACC AGGTTTAAAG CGGAATTCCC TATTTTCGAC AAGGTAACAC TGTCCACCGA ACACTTTGAG GAGTGTACCC TGTCTGATCT
CAGACACTAT ACAATCTGTA CATTTATATT CGCGTGCCAA CAACCTTATA AATGTGACGC CATACTTCAG GTTGATGTCA ACGGACCATT CACTGCACCA GTCTACCAGT TTCTGAAGTC
CAGCGCAGGT GGATTCTTGG GTGATCTGAT AAAGTGGAAC TTTGAGAAAT TCTTGGTCGA CAAAAATGGC AAGGTTGTGG AGAGATACCC ACCGACGACA TCACCTTTCC AGATTGAGGT
AACCATGCTT GACCCTGGCC AAGAAATCAT TCTAAAAAGT TATGTTTCTC AGAATTTTTT TTTCATTCAA ATCCATTTTT CGTTGTGCAC CTAACTGATT AAAATTAGCA AATATGTCAC
CTAGACTGTT TTACAAGCAG TCCAATGGTC ACCTATATCC TCTGCTTATA GGCACGAGAT ATTACCCAGG TTCCAGTTTT CACTATGGTG GTTCTCTCAC CTTCTCAGAA ATCTGAGATC
AAATTGGGTA TTAGATCTCT TTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAT CAGCGACCTT CGCCACCATC CTAACTTCCG CAGCTTCTCC CCGAGAGTCT TGGGACCGCA GGAATCCTGC TCGTCCTGCT GTGGCGTCTT CCTGTTTCCC GAGCCGAGCT
CCCGCCGGAT GGCAGCAAAT TTCGCCTCTG AACTGCAGAT TCGCCGCCTC GTCGTCTCGG CTGAGGGTAA ATGGCAGGCT AATGAGGAAT TCAGGCGTGG TTCATGCTAC GGCCGCTGCG
GAGAAGTCCA TCCACGATTA CACCGTCAAG GATATCGACG GGAAGAATGT GTCTCTTAGC AAATTCAAGG GAAAAGTGCT ACTGGTCGTC AATGTTGCTT CAAGATGTGG CTTAACAACA
TCCAATTACA TGGAGCTTTC ACACATCTAC GACAAGTACA AGACTCAAGG ATTTGAGATT CTGGCATTCC CTTGCAACCA ATTTGGGTTT CAGGAGCCGG GATCAAATCA AGAGATAAAA
CAATTTGCTT GCACCAGGTT TAAAGCGGAA TTCCCTATTT TCGACAAGGT TGATGTCAAC GGACCATTCA CTGCACCAGT CTACCAGTTT CTGAAGTCCA GCGCAGGTGG ATTCTTGGGT
GATCTGATAA AGTGGAACTT TGAGAAATTC TTGGTCGACA AAAATGGCAA GGTTGTGGAG AGATACCCAC CGACGACATC ACCTTTCCAG ATTGAGAAAT CTGAGATCAA ATTGGGTATT
AGATCTCTTT AA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCAT CAGCGACCTT CGCCACCATC CTAACTTCCG CAGCTTCTCC CCGAGAGTCT TGGGACCGCA GGAATCCTGC TCGTCCTGCT GTGGCGTCTT CCTGTTTCCC GAGCCGAGCT
CCCGCCGGAT GGCAGCAAAT TTCGCCTCTG AACTGCAGAT TCGCCGCCTC GTCGTCTCGG CTGAGGGTAA ATGGCAGGCT AATGAGGAAT TCAGGCGTGG TTCATGCTAC GGCCGCTGCG
GAGAAGTCCA TCCACGATTA CACCGTCAAG GATATCGACG GGAAGAATGT GTCTCTTAGC AAATTCAAGG GAAAAGTGCT ACTGGTCGTC AATGTTGCTT CAAGATGTGG CTTAACAACA
TCCAATTACA TGGAGCTTTC ACACATCTAC GACAAGTACA AGACTCAAGG ATTTGAGATT CTGGCATTCC CTTGCAACCA ATTTGGGTTT CAGGAGCCGG GATCAAATCA AGAGATAAAA
CAATTTGCTT GCACCAGGTT TAAAGCGGAA TTCCCTATTT TCGACAAGGT TGATGTCAAC GGACCATTCA CTGCACCAGT CTACCAGTTT CTGAAGTCCA GCGCAGGTGG ATTCTTGGGT
GATCTGATAA AGTGGAACTT TGAGAAATTC TTGGTCGACA AAAATGGCAA GGTTGTGGAG AGATACCCAC CGACGACATC ACCTTTCCAG ATTGAGAAAT CTGAGATCAA ATTGGGTATT
AGATCTCTTT AA
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Retrieve as FASTA
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