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Entry information : ZmPrx[P]147(Zm00001d010064 / GRMZM2G055487 [6a] / AC208341.4_FG007 [6a])
Entry ID 13290
Creation 2015-07-02 (Christophe Dunand)
Last sequence changes 2015-07-02 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2023-01-04 (Christophe Dunand)
Peroxidase information: ZmPrx[P]147(Zm00001d010064 / GRMZM2G055487 [6a] / AC208341.4_FG007 [6a])
Name ZmPrx[P]147(Zm00001d010064 / GRMZM2G055487 [6a] / AC208341.4_FG007 [6a])
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx[P]147
start..stop		 S start..stop
ZmPrx[P]148 602 0 34..328 1..295
ZmPrx88 588 0 28..327 27..323
ZmPrx[P]149 573 0 44..328 1..285
SbPrx126 533 0 34..327 34..326
Literature and cross-references ZmPrx[P]147(Zm00001d010064 / GRMZM2G055487 [6a] / AC208341.4_FG007 [6a])
Protein sequence: ZmPrx[P]147(Zm00001d010064 / GRMZM2G055487 [6a] / AC208341.4_FG007 [6a])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327
PWM (Da):   %s   35440.69  
PI (pH):   %s   7.95
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQLSAWKAPS FVPLYSTKCA PSGRGLEGRR CVGPSVEDVV RKEMVRALSV APSLAGPLLR MHFHDCFVRG CDGSVLLDST ANNTAEKDAK PNLTLRGFGF IERVKTAVEK ACSDTVSCAD  VLALMARDAV WPSKGPFWAV PLGRRDGRVS ISNETDQLPP PTGNFTELAQ LFGAKGLDTR DLAVLSAGHT IGTSSHCFSF SDRLYNFTGL DDARDTDPEL DRAYMARLRA KCASLDDNTT 
LVEMDPGSFR TFDLGYYANV AKRRGVFHSD AQLLADPSTR AYVLRHATGA HRDEFFADFA ASMVKMGAVG VLTGGQGEVR KKCNVVN* 

Retrieve as FASTA  
Remarks Pseudogene or partial sequence from genomic (chromo 8, introns 1 and 2). No EST. Part of the PS is missing. Incorrect prediction from Phytozome (small exon in 5', with any match). Segmentale duplicated (GRMZM2G410175).
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGCTGT CAGCTGTGAG TACTGAATTG ATTGGCTGAT ATTTCCAAAC GATTCTGGGT CAGACAACTC GGAACAGTGG AAGGCACCTA GCTTTGTACC ATTGTATTCA ACCAAGTGCG  CACCAAGTGG GCGGGGCCTT GAAGGCCGAA GGTGCGTGGG CCCCAGCGTG GAGGACGTCG TGCGGAAGGA GATGGTGCGC GCGCTCTCCG TCGCGCCCAG CCTCGCCGGG CCGCTCCTCA  GGATGCACTT CCACGACTGC TTCGTCAGGG TACGGGTTGC GTTTGTACTG TAGCGGCTTC GATGCACTTT CTTGTAGGCT TGCATTGCTA GCTAGCTAAC CCGGCCCGCC GTACGTTTCC  TGCGTTGCTC GCCGATCCGT GTCCGTACGT GTGCAGGGGT GCGACGGCTC GGTGCTCCTC GACTCCACGG CGAACAACAC CGCGGAGAAG GACGCGAAGC CGAACCTGAC GCTGCGCGGC  TTCGGCTTCA TCGAGAGGGT CAAGACCGCG GTGGAGAAGG CGTGCTCTGA CACCGTCTCC TGCGCCGACG TGCTGGCTCT CATGGCCAGG GACGCAGTGT GGCCGGTACG TACGTACTAC  GTACACACGC ACCAAAGCAT GCATATACGT ACACGTACGT ACGTTATTAT GAGAATCTCT TCTTACTGGC TAGCTGTTTG TTCTCACTCG CTCAGAGCAA GGGCCCGTTC TGGGCGGTCC  CGCTGGGGCG GCGGGACGGC AGGGTGTCCA TCTCCAACGA GACCGACCAG CTGCCGCCGC CCACGGGCAA CTTCACGGAG CTGGCCCAGC TTTTCGGCGC CAAGGGCCTG GACACCAGGG  ACCTGGCGGT GCTGTCGGCC GGCCACACCA TCGGCACGTC GTCGCATTGC TTCTCCTTCT CGGACCGCCT CTACAACTTC ACGGGCCTGG ACGACGCCCG CGACACCGAC CCGGAGCTGG  ACCGGGCGTA CATGGCGCGC CTCCGCGCCA AGTGCGCCAG CCTGGACGAC AACACCACGC TGGTGGAGAT GGACCCCGGC AGCTTCCGGA CCTTCGACCT GGGCTACTAC GCCAACGTGG  CCAAGCGCAG GGGCGTCTTC CACTCCGACG CCCAGCTGCT CGCCGACCCT TCCACCCGCG CCTACGTGCT CCGCCACGCC ACGGGTGCCC ACAGGGACGA GTTCTTCGCC GACTTCGCCG 
CGTCCATGGT CAAGATGGGC GCCGTCGGCG TGCTCACCGG CGGCCAGGGC GAGGTCAGGA AGAAGTGCAA CGTCGTCAAC TAA 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCAGCTGT CAGCTTGGAA GGCACCTAGC TTTGTACCAT TGTATTCAAC CAAGTGCGCA CCAAGTGGGC GGGGCCTTGA AGGCCGAAGG TGCGTGGGCC CCAGCGTGGA GGACGTCGTG  CGGAAGGAGA TGGTGCGCGC GCTCTCCGTC GCGCCCAGCC TCGCCGGGCC GCTCCTCAGG ATGCACTTCC ACGACTGCTT CGTCAGGGGG TGCGACGGCT CGGTGCTCCT CGACTCCACG  GCGAACAACA CCGCGGAGAA GGACGCGAAG CCGAACCTGA CGCTGCGCGG CTTCGGCTTC ATCGAGAGGG TCAAGACCGC GGTGGAGAAG GCGTGCTCTG ACACCGTCTC CTGCGCCGAC  GTGCTGGCTC TCATGGCCAG GGACGCAGTG TGGCCGAGCA AGGGCCCGTT CTGGGCGGTC CCGCTGGGGC GGCGGGACGG CAGGGTGTCC ATCTCCAACG AGACCGACCA GCTGCCGCCG  CCCACGGGCA ACTTCACGGA GCTGGCCCAG CTTTTCGGCG CCAAGGGCCT GGACACCAGG GACCTGGCGG TGCTGTCGGC CGGCCACACC ATCGGCACGT CGTCGCATTG CTTCTCCTTC  TCGGACCGCC TCTACAACTT CACGGGCCTG GACGACGCCC GCGACACCGA CCCGGAGCTG GACCGGGCGT ACATGGCGCG CCTCCGCGCC AAGTGCGCCA GCCTGGACGA CAACACCACG  CTGGTGGAGA TGGACCCCGG CAGCTTCCGG ACCTTCGACC TGGGCTACTA CGCCAACGTG GCCAAGCGCA GGGGCGTCTT CCACTCCGAC GCCCAGCTGC TCGCCGACCC TTCCACCCGC  GCCTACGTGC TCCGCCACGC CACGGGTGCC CACAGGGACG AGTTCTTCGC CGACTTCGCC GCGTCCATGG TCAAGATGGG CGCCGTCGGC GTGCTCACCG GCGGCCAGGG CGAGGTCAGG 
AAGAAGTGCA ACGTCGTCAA CTAA 

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