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Entry information : RIgAPx01 (SYHW-2012039)
Entry ID 13297
Creation 2014-12-11 (Bruno Savelli)
Last sequence changes 2015-07-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2015-07-29 (Christophe Dunand)
Peroxidase information: RIgAPx01 (SYHW-2012039)
Name (synonym) RIgAPx01 (SYHW-2012039)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Grossulariaceae Ribes
Organism Ribes aff. giraldii    [TaxId: 3801 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RIgAPx01
start..stop		 S start..stop
AinAPx 447 3.43e-162 1..243 1..250
GrAPx01 446 1.28e-161 1..243 1..250
GhAPx02 443 1.58e-160 1..243 1..250
EgrAPx03 442 3.55e-160 1..243 1..249
Literature and cross-references RIgAPx01 (SYHW-2012039)
Protein sequence: RIgAPx01 (SYHW-2012039)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   243
PWM (Da):   %s   26741.66  
PI (pH):   %s   6.72
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKCYPTVSA EYLKAIEKCK RKLRGLIAEK NCAPLMLRIA WHSAGTYDVK TKTGGPFGTM KHAAELAHGA NNGLDIAVRL LEPIKEQFPT ISYGDFYQLA GVVPEVPFHP GREDKPQPPP  EGRLPDATKG NDHLREVFVK TMGLSDKDIV TLSGAHTLGR CHKDRSGFEG PWTSNPLIFD NSYFKELLSG EKEGLLQLPT DKALLADPVF RPLVEKYAAD EDAFFVDYAE SHLKLSELGF 
ADA 

Retrieve as FASTA  
Remarks SYHW-2012039-Ribes_aff._giraldii
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAGT GCTACCCTAC CGTGAGTGCC GAATACTTGA AGGCCATTGA GAAGTGCAAG AGGAAGCTTA GAGGCTTAAT CGCTGAGAAG AACTGTGCTC CTTTGATGCT CCGTATCGCA  TGGCACTCTG CTGGTACCTA TGATGTGAAG ACCAAGACCG GCGGTCCATT CGGAACAATG AAGCACGCCG CAGAACTCGC TCATGGAGCC AACAACGGTC TCGATATTGC CGTTAGACTT  TTGGAACCCA TTAAGGAGCA ATTCCCTACA ATTTCTTATG GAGATTTCTA TCAGCTAGCT GGTGTTGTCC CTGAAGTTCC TTTCCACCCA GGTCGCGAGG ACAAGCCTCA GCCACCTCCC  GAGGGTCGTT TGCCTGATGC TACAAAAGGC AACGATCATT TGAGGGAAGT TTTTGTTAAA ACCATGGGTC TCAGTGACAA AGACATTGTT ACTCTCTCTG GTGCCCACAC CCTGGGTAGG  TGTCACAAGG ATCGTTCTGG ATTTGAAGGT CCCTGGACCA GCAACCCTCT CATCTTCGAT AACTCTTACT TCAAGGAACT CCTATCTGGA GAGAAGGAAG GTCTTCTGCA ATTGCCAACT  GACAAGGCTC TTCTCGCAGA TCCTGTCTTT CGCCCCCTTG TCGAGAAATA TGCTGCAGAT GAGGATGCTT TCTTTGTGGA TTATGCCGAA TCACACCTGA AGCTTTCTGA ATTGGGATTT 
GCTGATGCT 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAGT GCTACCCTAC CGTGAGTGCC GAATACTTGA AGGCCATTGA GAAGTGCAAG AGGAAGCTTA GAGGCTTAAT CGCTGAGAAG AACTGTGCTC CTTTGATGCT CCGTATCGCA  TGGCACTCTG CTGGTACCTA TGATGTGAAG ACCAAGACCG GCGGTCCATT CGGAACAATG AAGCACGCCG CAGAACTCGC TCATGGAGCC AACAACGGTC TCGATATTGC CGTTAGACTT  TTGGAACCCA TTAAGGAGCA ATTCCCTACA ATTTCTTATG GAGATTTCTA TCAGCTAGCT GGTGTTGTCC CTGAAGTTCC TTTCCACCCA GGTCGCGAGG ACAAGCCTCA GCCACCTCCC  GAGGGTCGTT TGCCTGATGC TACAAAAGGC AACGATCATT TGAGGGAAGT TTTTGTTAAA ACCATGGGTC TCAGTGACAA AGACATTGTT ACTCTCTCTG GTGCCCACAC CCTGGGTAGG  TGTCACAAGG ATCGTTCTGG ATTTGAAGGT CCCTGGACCA GCAACCCTCT CATCTTCGAT AACTCTTACT TCAAGGAACT CCTATCTGGA GAGAAGGAAG GTCTTCTGCA ATTGCCAACT  GACAAGGCTC TTCTCGCAGA TCCTGTCTTT CGCCCCCTTG TCGAGAAATA TGCTGCAGAT GAGGATGCTT TCTTTGTGGA TTATGCCGAA TCACACCTGA AGCTTTCTGA ATTGGGATTT 
GCTGATGCT 

Retrieve as FASTA