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Entry information : GtAPx03
Entry ID 13353
Creation 2015-08-04 (Christophe Dunand)
Last sequence changes 2015-08-04 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2016-02-10 (Catherine Mathe)
Peroxidase information: GtAPx03
Name GtAPx03
Class Ascorbate peroxidase     [Orthogroup: APx002]*
Taxonomy Eukaryota Cryptophyta Geminigeraceae Guillardia
Organism Guillardia theta    [TaxId: 55529 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GtAPx03
start..stop		 S start..stop
SsAPx04_AU1 276 1.78e-91 12..286 94..353
RobtAPx04 273 3.47e-91 12..285 16..274
CbrebAPx07 271 1.4e-90 13..285 17..274
SmAPx03-2_72 270 4.75e-90 12..285 86..344
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1053096..1053217 120 N° 2 1053568..1053706 137 N° 3 1053761..1053811 49 N° 4 1053857..1053946 88
N° 5 1054012..1054095 82 N° 6 1054263..1054394 130 N° 7 1054446..1054493 46 N° 8 1054664..1054717 52
N° 9 1054766..1054810 43 N° 10 1054861..1054965 103  
join(1053096..1053217,1053568..1053706,1053761..1053811,1053857..1053946,1054012 ..1054095,1054263..1054394,1054446..1054493,1054664..1054717,1054766..1054810,10 54861..1054965)


exon

Literature and cross-references GtAPx03
DNA ref. JGI genome:   scaffold_10 (1053096..1054965)
Cluster/Prediction ref. JGI gene:   65752
Protein sequence: GtAPx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   289 (201)
PWM (Da):   %s   31724.45 (22712.5)  
PI (pH):   %s   4.61 (6.52) Peptide Signal:   %s   cut: 25 range:25-225
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQKDGSDSRDGRELMEKESCAPLMLRLAWHDAATYRADGGKSDDSDKSTGEWPRCGGVNGSITFAPELDLPCNKGLTLALSLLYELQEKNDLVSVADVIQMAGQVAVEFSGGPKIAMRWG
RSTTGVKYLCSDSDRGNPPFASSLSAPEHLRQIFGLMGLSDQEIVVLMGAHTLGRARPSRSGEGAAATCYTRDGPGRCKGGSSWTQEWLKFDNSYFKNLLLTPPADSQLLRLSTDSALAE
DPVFREWVEKYAEDQELFFSDYARTHRKMSELGAKFEPQEGIEVDLEEG*

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGAAGGACGGCAGCGACTCACGGGATGGCAGGGAGCTCATGGAGAAGGAGAGCTGTGCTCCCCTGATGCTGCGGTTGGCATGGCATGACGCGGCAACTTATCGAGCAGATGGAGGA
AAAAGTGGAGGACGAGGAAATGATGACGACGATGATGATAATGATGCCAATGAGGCCGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAT
GATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGGTAATGATGGTGATGGTGAT
GGTGATGGTGATGGTGATGGTGATGGTGATCGTGATCGTGATGGTGTTTAAGATGCTGTTGATGTTGATGTTGACGTTAGCAATAATATTGAAGATAGTGCGGTGGCGGATGAGATCGGA
TGACTCTGACAAGTCTACAGGGGAATGGCCGAGGTGCGGAGGCGTCAACGGCTCCATCACCTTCGCTCCCGAACTCGATCTCCCCTGCAACAAGGGACTGACACTCGCACTCTCACTCCT
CTACGAGCTTCAAAAGTGCGTCGGGGGAGACGGAGATGTCGATGAAGGGACTTACAGCCTTTCCGACAGGAGAAGAACGACTTGGTCTCTGTTGCCGACGTCATCCAGATGGCTGGACAA
AAGTAACTCCCTGCTCTTTCTGTGCTCCTACTCATCCTCCCTCTCAGGTGGCAGTTGAGTTCTCGGGCGGTCCCAAGATCGCGATGCGATGGGGGAGGTCAACAACAGGAGTGAAATATC
TGTGCTCTGACTCTGACACGTGGCAGGAAGCATGTGGACGACCCGGACTGTTGTGCAGACCCTGCTGTCTCTCAAGACCTAGAGCGAGGAAATCCTCCCTTCGCTTCCTCTTTGTCTGCT
CCTGAGCATCTGCGGCAAATTTTCGGTCTAATGGGCCTGTCTGACCAGAGGTCTGCCTACCATGTCTTCCCGTACCTCCATCTGCTCCAGCTAGTTTTCAATCTTTGCATCCTCTATCCA
CCTATCTGCTCCTGCCACTTCCTCTGCTCTTTCCCTGTCTTGTTCTGCTTCTCACTCTCGCTTCTCCTCTCCCTCTCCTTCTTTTCTTTTGCACCAGGAGATCGTCGTCTTGATGGGTGC
TCACACGCTGGGGAGGGCGCGGCCATCACGGTCAGGGGAAGGGGCGGCAGCGACTTGCTACACGAGAGATGGGCCAGGGAGGTGCAAGGGAGGGTCGAGCTGGACTCAGAGGTGAGGCTG
AGCTGGGCTTGCCGAGCTGTCAAAGTCTCATGTCAACCTCAGGAGTGGCTCAAGTTTGACAACAGCTACTTCAAGAACCTCCTGCTGACGCGGTAGGCATGACCAGCAGCCCCTCCACTT
GATTCGCAGCATTTTCTGCATCATTCTCCAGCCCTCCTAGCCTCTCCCCCCTTCCACTAACTGCATATTTCCTGCTCTGCTCTCCTGCTCTTCATTGCTCGAATCTAATCTTCTGTTGTT
GTCTCTCACGATTCTCCTGCAGCCACCAGCTGATTCTCAGCTCCTTCGCCTCTCGACCGATTCAGCACTCGCAGAGAGGTTTCCAGCCTCCGTCTCTAGGGCAACTCTCCAGCTGAACCC
GTGCAGGACCCGGTGTTTCGAGAGTGGGTGGAGAAGTACGCGGAGGACCAGAGGTAGGCTCTTGTGCAGCTCGCGTAGCAGCTGGGGTTGACCTGGGCCCCAGGAGCTGTTCTTCTCGGA
CTATGCGCGAACTCACCGCAAGATGAGCGAGCTGGGGGCGAAGTTCGAGCCTCAGGAAGGGATTGAGGTAGACTTGGAGGAAGGCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAGAAGGACGGCAGCGACTCACGGGATGGCAGGGAGCTCATGGAGAAGGAGAGCTGTGCTCCCCTGATGCTGCGGTTGGCATGGCATGACGCGGCAACTTATCGAGCAGATGGAGGA
AAATCGGATGACTCTGACAAGTCTACAGGGGAATGGCCGAGGTGCGGAGGCGTCAACGGCTCCATCACCTTCGCTCCCGAACTCGATCTCCCCTGCAACAAGGGACTGACACTCGCACTC
TCACTCCTCTACGAGCTTCAAGAGAAGAACGACTTGGTCTCTGTTGCCGACGTCATCCAGATGGCTGGACAAGTGGCAGTTGAGTTCTCGGGCGGTCCCAAGATCGCGATGCGATGGGGG
AGGTCAACAACAGGAGTGAAATATCTGTGCTCTGACTCTGACCGAGGAAATCCTCCCTTCGCTTCCTCTTTGTCTGCTCCTGAGCATCTGCGGCAAATTTTCGGTCTAATGGGCCTGTCT
GACCAGGAGATCGTCGTCTTGATGGGTGCTCACACGCTGGGGAGGGCGCGGCCATCACGGTCAGGGGAAGGGGCGGCAGCGACTTGCTACACGAGAGATGGGCCAGGGAGGTGCAAGGGA
GGGTCGAGCTGGACTCAGGAGTGGCTCAAGTTTGACAACAGCTACTTCAAGAACCTCCTGCTGACGCCACCAGCTGATTCTCAGCTCCTTCGCCTCTCGACCGATTCAGCACTCGCAGAG
GACCCGGTGTTTCGAGAGTGGGTGGAGAAGTACGCGGAGGACCAGGAGCTGTTCTTCTCGGACTATGCGCGAACTCACCGCAAGATGAGCGAGCTGGGGGCGAAGTTCGAGCCTCAGGAA
GGGATTGAGGTAGACTTGGAGGAAGGCTGA

Retrieve as FASTA