1. Browse the Database
  2. View Redoxidase
Entry information : HaPrx[P]104 (HanXRQChr14g0430791)
Entry ID 13565
Creation 2016-05-02 (Christophe Dunand)
Last sequence changes 2017-12-08 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2017-12-08 (Christophe Dunand)
Peroxidase information: HaPrx[P]104 (HanXRQChr14g0430791)
Name (synonym) HaPrx[P]104 (HanXRQChr14g0430791)
Class Class III peroxidase     [Orthogroup: Prx032]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx[P]104
start..stop		 S start..stop
HaPrx[P]55 371 3.5e-134 1..179 1..179
HaPrx[P]81 361 3.08e-130 1..179 1..177
HaPrx103 297 1.13e-102 1..179 149..335
HaPrx122 228 3.88e-75 1..179 174..360
Literature and cross-references HaPrx[P]104 (HanXRQChr14g0430791)
DNA ref. HanXRQ genome:   HanXRQChr14 (31022182..31021447)
Protein sequence: HaPrx[P]104 (HanXRQChr14g0430791)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   179 (310)
PWM (Da):   %s   19821.83 (33020.9)  
PI (pH):   %s   8.31 (9.28) Peptide Signal:   %s   cut: 25 range:25-334
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
PGFLGRRDGL PSNAAWIEFA xPSFSWESSL AYFESKGLDV QDMVTLLGAH MMRRVRCINI HDCLYNFNNT RKPDPTMEES TLSYLRNGCP PKTRLGQPNP LINLNPSNLD QLFTNSYYSQ 
VLTNKVVLGG VTRMLSDEYA SPIPDFKLQF TFSMAGMGGL KVITGTDGQI RLNCRMVNK 

Retrieve as FASTA  
Remarks Pseudogene from genomic (end of exon 3 and exon 4 with several frame shift)
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCTGGTTTCT TAGGAAGAAG AGACGGACTT CCATCGAACG CAGCATGGAT CGAATTCGCT TAnCCATCCT TTTCGTGGGA ATCATCTTTG GCATACTTTG AATCTAAAGG TTTAGATGTG  CAAGACATGG TTACACTCTT AGGTAAGTCA TCTATTCTAA CAATATTGTT CCTATATTTA TAACACACTG ATAATTACTT GCAAGTCAAG CATGCTGATA TTATGATCAC GAAAGACCAA  ACTCTAAATA TTGCCAGAAC CGCACTCTTT AGTCACACAT TTTTTTATAA GTTCTCAATA AAATTTATAA CTTTTAGGAG CACATATGAT GAGAAGAGTT CGATGCATTA ACATTCATGA  TTGCCTATAC AACTTCAACA ACACTAGAAA ACCCGACCCC ACAATGGAAG AATCTACATT GAGTTACTTA AGGAACGGAT GCCCTCCAAA AACGAGGTTG GGTCAACCTA ACCCGCTCAT  AAACTTAAAC CCGAGCAACC TGGACCAGCT CTTTACCAAC TCCTACTACT CGCAAGTGTT GACCAATAAA GTTGTTTTAG GCGTCGACCA ACAGCTTCGC TATGGGGGTG ACACGTATGT  TAAGCGATGA ATATGCTTCG CCGATTCCAG ATTTTAAGCT GCAGTTTACT TTTTCAATGG CTGGGATGGG TGGGCTTAAG GTTATAACTG GAACTGATGG TCAGATCCGA CTCAACTGTC 
GAATGGTTAA CAAGTAG 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CCTGGTTTCT TAGGAAGAAG AGACGGACTT CCATCGAACG CAGCATGGAT CGAATTCGCT TAnCCATCCT TTTCGTGGGA ATCATCTTTG GCATACTTTG AATCTAAAGG TTTAGATGTG  CAAGACATGG TTACACTCTT AGGAGCACAT ATGATGAGAA GAGTTCGATG CATTAACATT CATGATTGCC TATACAACTT CAACAACACT AGAAAACCCG ACCCCACAAT GGAAGAATCT  ACATTGAGTT ACTTAAGGAA CGGATGCCCT CCAAAAACGA GGTTGGGTCA ACCTAACCCG CTCATAAACT TAAACCCGAG CAACCTGGAC CAGCTCTTTA CCAACTCCTA CTACTCGCAA  GTGTTGACCA ATAAAGTTGT TTTAGGCGGG GTGACACGTA TGTTAAGCGA TGAATATGCT TCGCCGATTC CAGATTTTAA GCTGCAGTTT ACTTTTTCAA TGGCTGGGAT GGGTGGGCTT 
AAGGTTATAA CTGGAACTGA TGGTCAGATC CGACTCAACT GTCGAATGGT TAACAAGTAG 

Retrieve as FASTA