View Redoxidase 13603

Entry information : HaPrx49 (HanXRQChr04g0111511)

Entry ID	13603
Creation	2016-05-02 (Christophe Dunand)
Last sequence changes	2016-05-02 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPrx49 (HanXRQChr04g0111511)

Name (synonym)

HaPrx49 (HanXRQChr04g0111511)

Class

Class III peroxidase [Orthogroup: Prx021]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPrx49 start..stop	S start..stop
LsaPrx10	548	0	10..331	6..324
LperPrx10	523	0	10..318	6..311
LvPrx10	463	2.33e-166	10..280	6..273
StPrx23	464	5.29e-166	7..330	3..324

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13603' 'join(106501439..106501666,106501753..106501944,106502039..106502201,106502773..106503185)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	106501439..106501666	226	N° 2	106501753..106501944	190	N° 3	106502039..106502201	161	N° 4	106502773..106503185	411
join(106501439..106501666,106501753..106501944,106502039..106502201,106502773..1 06503185)

Literature and cross-references HaPrx49 (HanXRQChr04g0111511)

DNA ref.	HanXRQ genome: HanXRQChr04 (106501439..106503185)

Protein sequence: HaPrx49 (HanXRQChr04g0111511)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	331 (304)
PWM (Da):	35513.94 (32515.3)
PI (pH):	8.32 (8.21)	Peptide Signal:	cut: 28 range:28-331

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSPMIMARILTIITLVSLQCFVTLVHSKAQVQIGFYSDSCSAAES
IVKQEVSKAYSEDRGLAAGLVRLHFHDCFVRGCDASVLIDSTPSNQAEKDSPANNPSVRGFNVIDSAKARLEASCPGIVSCADIIAFAARDSFEITGGLGYEVPAGRRDGRVSLIADTRALPPATSNLAQLTKSFSTNGLTQEEMVTLSGA
HTIGRSHCTAFASRLYNFSSTVNLDPSLNPLYASKLKQECPKGSNNVNLVVPMNPSSPTISDTGYYVDVLNNRGLFTSDQSLLTSQSTLNQVHQHAMNPLVWKIKFAKAMVKMGRIGVIT
GQQGEIRSNCRVINK

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAGTCCCATGATCATGGCTCGTATTCTTACAATTATAACTTTGGTTTCATTACAATGTTTTGTAACTTTGGTTCATTCAAAAGCCCAAGTTCAAATCGGGTTCTATTCGGACTCATGT
TCTGCGGCTGAATCTATTGTCAAACAGGAAGTGAGTAAAGCCTACTCGGAAGACAGGGGTCTTGCTGCCGGTCTCGTGAGACTGCATTTTCACGATTGTTTTGTGAGGGGGTAAGTTTGG
TTCAAGTTGTAGGTTATAACGGGCTGAAATCAAAATGGCTCCGGTCTTTATACTAACAATGGTTTGTTCGTAACAGGGTTGTGATGCATCGGTCTTAATAGATTCGACTCCTTCAAACCA
AGCGGAGAAAGATTCACCTGCAAATAATCCAAGTGTACGTGGATTTAACGTCATTGATAGCGCTAAAGCCAGACTCGAAGCCTCATGTCCGGGAATTGTTTCTTGTGCTGATATAATTGC
ATTTGCAGCTAGAGATAGCTTTGAAATATAGTAAAGATAAATGAAAACTTATGACACAAAGGCCCAGTCAATTGGACCGGGCTTTACGAGTGTATAATCGTGTGTATAATTGTTGTTATT
GCAGACTGGTGGACTGGGGTATGAAGTCCCTGCAGGGAGAAGAGATGGCAGAGTATCACTGATCGCAGACACGAGAGCATTGCCTCCGGCAACATCTAATCTTGCCCAACTCACTAAGTC
GTTTTCAACCAATGGGTTGACCCAAGAAGAAATGGTTACTCTATCCGCGGTAAAGCGGTTGATAACAAGATTTTGATTAGATAAAGGGATAATATGTACATAGGCACACATTTGAGTCAA
ATTAACGAATAAGTTTTGATAAACATGTCCCGGTAAGATTGACCTAACTTGTCAACCCGCTTTTTCTGTATTAATAAAAAACATTTTTAACGACAAAAATTAAAACCAGATTTGAGTTTT
ATGTCAAAATTTAAGAAGAGAAATTAGCATTATTTTTATAATTGAAAGTTGAAGATTTTATAGATAATTGTACTTTTTTATGTTGTTGTAAACTGTAGTTTAGAGCATTTATATGCAAAA
AAAAGTGTAAAAACGAAAAAAGTTTAGAAGGACCACCACGACGGCACGACCCCATAGGCAACCCAAGTATTCAAAAAGTTTTCATCAAGGTCACTTAACTAACAAAACAATTTTAAAGGT
CCATTTGATTTTGTTTTGTCAAGTTCGTGTTGATTAACTTAACCTCACACGTTTCAACCCACACCCTAATTTACTTATCCTAACATGTTACCCAACCTAAACATTATACACCTCTAAAAT
CTTGAATCGGTGAATTACAGGAGCACATACTATTGGCCGATCACACTGTACAGCCTTTGCTAGCAGGCTATACAATTTCAGCTCCACCGTAAACCTGGACCCGAGTTTGAACCCGTTATA
TGCTAGCAAGCTAAAACAAGAATGCCCAAAGGGGAGTAACAACGTGAATTTGGTTGTACCCATGAACCCTAGCTCACCAACCATAAGTGACACAGGTTACTATGTAGACGTCTTGAATAA
CAGAGGACTATTCACATCAGACCAGTCTCTACTCACGAGCCAATCGACATTAAACCAAGTGCACCAGCATGCTATGAACCCGCTGGTTTGGAAGATTAAATTTGCAAAAGCAATGGTGAA
GATGGGTAGGATCGGTGTTATTACGGGTCAACAAGGAGAGATTCGATCAAACTGCCGAGTGATAAACAAATAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TTACTATAAC ACACACATTG CATTATAAAT AAGGTTAAAT TTTCATCACC AATAGTCTGC CATACTGCAC ATGAGTCCCA TGATCATGGC TCGTATTCTT ACAATTATAA CTTTGGTTTC ATTACAATGT TTTGTAACTT TGGTTCATTC AAAAGCCCAA GTTCAAATCG GGTTCTATTC GGACTCATGT TCTGCGGCTG AATCTATTGT CAAACAGGAA GTGAGTAAAG CCTACTCGGA AGACAGGGGT CTTGCTGCCG GTCTCGTGAG ACTGCATTTT CACGATTGTT TTGTGAGGGG TTGTGATGCA TCGGTCTTAA TAGATTCGAC TCCTTCAAAC CAAGCGGAGA AAGATTCACC TGCAAATAAT CCAAGTGTAC GTGGATTTAA CGTCATTGAT AGCGCTAAAG CCAGACTCGA AGCCTCATGT CCGGGAATTG TTTCTTGTGC TGATATAATT GCATTTGCAG CTAGAGATAG CTTTGAAATA ACTGGTGGAC TGGGGTATGA AGTCCCTGCA GGGAGAAGAG ATGGCAGAGT ATCACTGATC GCAGACACGA GAGCATTGCC TCCGGCAACA TCTAATCTTG CCCAACTCAC TAAGTCGTTT TCAACCAATG GGTTGACCCA AGAAGAAATG GTTACTCTAT CCGGAGCACA TACTATTGGC CGATCACACT GTACAGCCTT TGCTAGCAGG CTATACAATT TCAGCTCCAC CGTAAACCTG GACCCGAGTT TGAACCCGTT ATATGCTAGC AAGCTAAAAC AAGAATGCCC AAAGGGGAGT AACAACGTGA ATTTGGTTGT ACCCATGAAC CCTAGCTCAC CAACCATAAG TGACACAGGT TACTATGTAG ACGTCTTGAA TAACAGAGGA CTATTCACAT CAGACCAGTC TCTACTCACG AGCCAATCGA CATTAAACCA AGTGCACCAG CATGCTATGA ACCCGCTGGT TTGGAAGATT AAATTTGCAA AAGCAATGGT GAAGATGGGT AGGATCGGTG TTATTACGGG TCAACAAGGA GAGATTCGAT CAAACTGCCG AGTGATAAAC AAATAAAATC AAGCAAGTAA ACGTGAGGTG CTCAATTATT TTGATCCCTA TGTGTACGTC TTTTCCTTCA AGTGTATAAG CAGTTTGCAG TATAATCACT AAGATATCTT GAATAATATA CGTGTTATGG GTGAGCACAA AACCGAAAAA AAAAAAACGA ACCGAACAAC CCAAAAAATC ATTTTCTATG GCGTTTGTTA TATATTATTT AATAAGAACA TTAACATGTT TATTTATCTT TAAAATACTT TATCAATTGC
CTACTTGAGA TAACAAAATT TTA

Retrieve as FASTA