View Redoxidase 13610

Entry information : HaPrx56 (HanXRQChr07g0190001)

Entry ID	13610
Creation	2016-05-02 (Christophe Dunand)
Last sequence changes	2016-05-02 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPrx56 (HanXRQChr07g0190001)

Name (synonym)

HaPrx56 (HanXRQChr07g0190001)

Class

Class III peroxidase [Orthogroup: Prx009]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPrx56 start..stop	S start..stop
HaPrx36	604	0	1..329	1..327
LvPrx15	586	0	1..329	1..328
AanPrx01	580	0	1..329	1..328
LsaPrx15	553	0	1..329	1..328

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13610' 'complement(join(25337749..25338155,25338569..25338734,25338823..25339239))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	25338823..25339239	415	N° 2	25338569..25338734	164	N° 3	25337749..25338155	405
complement(join(25337749..25338155,25338569..25338734,25338823..25339239))

Literature and cross-references HaPrx56 (HanXRQChr07g0190001)

DNA ref.	HanXRQ genome: HanXRQChr07 (25339239..25337749)

Protein sequence: HaPrx56 (HanXRQChr07g0190001)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	329 (304)
PWM (Da):	35344.72 (32723.2)	Transmb domain:	o594-616i1044-1066o1081-1103i1149-1171o1186-1208i1221-1243o
PI (pH):	8.56 (8.39)	Peptide Signal:	cut: 26 range:26-329

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGRVTIIQVLALSSLLIIFPNLASAQLKQNYYANVCPNVETIVRN
AVQAKVRQTFITIPGTLRLFFHDCFVQGCDASVMIASSGSNTAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPSCR
NKVSCADILVMATRDVVVMAGGPSYAVELGRFDGLSSTAASVGGKLPKPNMNLDQLNAMFAANGLTQVDMIALSGAHTVGFSHCDQFTNRIYNFSKQSLVDPTLNPTYAAQLQQQCPKNV
DPQIAINMDPNTPNTFDNMYFKNLQQGKGLFTSDQVLFTDSRSKQTVDSWASSTKAFNNAFVAAMTKLGRVGVKNAKNGNIRRDCSAFN

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGTCGGGTCACTATTATTCAAGTATTAGCTCTCTCTTCACTTCTCATCATCTTCCCAAACTTGGCTTCTGCTCAACTCAAGCAAAACTACTACGCAAACGTTTGCCCGAATGTAGAA
ACAATCGTTCGCAACGCAGTCCAGGCTAAGGTTCGACAGACATTTATTACAATCCCAGGAACTCTTCGTTTGTTCTTCCATGATTGTTTCGTTCAAGGGTGTGACGCTTCGGTTATGATA
GCATCCAGCGGGTCCAACACTGCGGAAAAAGACCATCCGGATAACCTGTCGTTGGCTGGAGACGGGTTTGATACGGTTATTAAAGCTAAAGCGGCGGTTGATGCTGTCCCGAGTTGCAGA
AATAAGGTTTCGTGTGCGGATATTCTTGTCATGGCTACGCGTGATGTTGTTGTGATGGTATTATTGATTTTGTTTCATGTAGGTTTTTAGATGTTTATAGTAGTTAGTTTGGATATTGAT
TGTTAATAATTGGTGGTGGTTGCAGGCGCGGGGGGACCGTCGTATGCGGTGGAGCTCGGGAGGTTTGACGGGTTGAGTTCGACAGCGGCTAGTGTGGGTGGGAAGTTGCCTAAACCAAAC
ATGAATTTGGATCAGCTTAACGCCATGTTTGCGGCTAACGGGTTGACCCAAGTCGACATGATTGCTCTCTCAGGTAAAAAGGTGTTGATTTCAACGCGTTTATAATGGGTCGATTCAGGA
CCTTATGCTATCACTGTTGTGTCTAAATAGGTAGATGGGTCGGGTCAAACGGACCGGATGTCGGTCATACATATTTTTAACACAAAACCTCCTAAATTACATTCCTTTTGCAATTGTACT
CAACTAGCGGGTGAAACTCACGCTTTGCGTCAGAGATGTAAAAATTTATATGGCTCGATTACAACGACTAAAAAAAGTTTATTTACATATTGCAAAAAAGTTGTATGGTGTAACCCAAAA
AGTAAAGTCGTGTTTTATATAGATCGAAAACCATAAAAACGAATATCGATACCGGTACCGATGTCGCTTGGTCGGATGTCAGTCACATTTTTTAACAAAATATTCTCGGGTCAACCCATT
ATCTAGGTGTGCACACACGGTGGGATTCTCGCATTGCGACCAATTCACAAACAGGATATACAACTTCAGCAAGCAGAGCCTAGTGGACCCAACTCTAAACCCAACTTACGCAGCCCAATT
GCAGCAACAGTGTCCAAAAAACGTTGACCCACAGATAGCTATAAATATGGATCCAAACACGCCCAATACATTTGACAACATGTACTTCAAGAATTTGCAACAAGGAAAAGGATTGTTCAC
CTCTGACCAGGTCCTCTTCACTGACTCAAGGTCGAAGCAGACGGTGGACTCGTGGGCCTCGAGCACGAAAGCTTTCAATAACGCATTTGTTGCAGCCATGACTAAACTGGGTCGGGTTGG
GGTTAAGAATGCCAAGAATGGGAATATCAGGCGAGATTGTTCTGCATTTAATTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GCTGGCTTTA TCTTTACCTG CCTTATTTAA CAAATCTTAC TACTAGCTAT CATCTTCCAA ACACATACAC ATACACCTTC ATCAACCATC ATGGGTCGGG TCACTATTAT TCAAGTATTA GCTCTCTCTT CACTTCTCAT CATCTTCCCA AACTTGGCTT CTGCTCAACT CAAGCAAAAC TACTACGCAA ACGTTTGCCC GAATGTAGAA ACAATCGTTC GCAACGCAGT CCAGGCTAAG GTTCGACAGA CATTTATTAC AATCCCAGGA ACTCTTCGTT TGTTCTTCCA TGATTGTTTC GTTCAAGGGT GTGACGCTTC GGTTATGATA GCATCCAGCG GGTCCAACAC TGCGGAAAAA GACCATCCGG ATAACCTGTC GTTGGCTGGA GACGGGTTTG ATACGGTTAT TAAAGCTAAA GCGGCGGTTG ATGCTGTCCC GAGTTGCAGA AATAAGGTTT CGTGTGCGGA TATTCTTGTC ATGGCTACGC GTGATGTTGT TGTGATGGCG GGGGGACCGT CGTATGCGGT GGAGCTCGGG AGGTTTGACG GGTTGAGTTC GACAGCGGCT AGTGTGGGTG GGAAGTTGCC TAAACCAAAC ATGAATTTGG ATCAGCTTAA CGCCATGTTT GCGGCTAACG GGTTGACCCA AGTCGACATG ATTGCTCTCT CAGGTGCACA CACGGTGGGA TTCTCGCATT GCGACCAATT CACAAACAGG ATATACAACT TCAGCAAGCA GAGCCTAGTG GACCCAACTC TAAACCCAAC TTACGCAGCC CAATTGCAGC AACAGTGTCC AAAAAACGTT GACCCACAGA TAGCTATAAA TATGGATCCA AACACGCCCA ATACATTTGA CAACATGTAC TTCAAGAATT TGCAACAAGG AAAAGGATTG TTCACCTCTG ACCAGGTCCT CTTCACTGAC TCAAGGTCGA AGCAGACGGT GGACTCGTGG GCCTCGAGCA CGAAAGCTTT CAATAACGCA TTTGTTGCAG CCATGACTAA ACTGGGTCGG GTTGGGGTTA AGAATGCCAA GAATGGGAAT ATCAGGCGAG ATTGTTCTGC ATTTAATTGA
TGTTATACTC ATATATTACT AAGCTGATTG CATAAATTAA ACACTCTATT TACTTATTGC GGGAATACTT ACATGATTGA ATTTTATAAC ATTAGTTTAA AG

Retrieve as FASTA