View Redoxidase 13730

Entry information : HaPNC22 (HanXRQChr17g0535631)

Entry ID	13730
Creation	2016-05-13 (Christophe Dunand)
Last sequence changes	2017-12-08 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-12-08 (Christophe Dunand)

Peroxidase information: HaPNC22 (HanXRQChr17g0535631)

Name (synonym)

HaPNC22 (HanXRQChr17g0535631)

Class

Plantacyanin [Orthogroup: PNC001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPNC22 start..stop	S start..stop
HaPNC20	256	1.64e-90	1..125	1..125
HaPNC12	256	1.64e-90	1..125	1..125
HaPNC11	249	7.74e-88	1..125	1..125
HaPNC16	240	5.44e-84	1..125	1..125

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13730' 'complement(join(111221595..111221791,111221951..111222128))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	111221951..111222128	176	N° 2	111221595..111221791	195
complement(join(111221595..111221791,111221951..111222128))

Literature and cross-references HaPNC22 (HanXRQChr17g0535631)

DNA ref.	HanXRQ genome: HanXRQChr11 (111222128..111221595)

Protein sequence: HaPNC22 (HanXRQChr17g0535631)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	125 (96)
PWM (Da):	13032.61 (10034.1)
PI (pH):	9.98 (10.33)	Peptide Signal:	cut: 30 range:30-125

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAKGRGSEMVSMAVLCLHVAALQCEIAQAATYAAGGNGGWTFNVS
GWENGKKFKAGDILVFNYQKGAHNVVVVNKAGYVGCSTTPRNAKIYTSGKDKIRLVKGLNSFICSLPGHCGAGMKIQIS

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAAGGGAAGAGGCAGTGAAATGGTGTCAATGGCTGTGCTATGTCTACACGTGGCGGCACTTCAATGCGAGATAGCTCAGGCAGCTACTTATGCCGCCGGCGGTAATGGTGGCTGG
ACGTTTAACGTCTCCGGCTGGGAAAATGGCAAGAAGTTTAAGGCCGGCGACATCCTTGGTATCATCTCAACATCCTATCACTAGTTTACGTGCTTAGTTCTTTTTATAGGTAGCAATTTC
AACCGATTTAGTTAACTTATTCTAAGTTCATTTAAAGTTTTAACAATAACAATAACAATAATAAATGGTTACTTAAAATGATTTTTGATGGGGACAGTGTGTTCAACTACCAAAAAGGAG
CACATAATGTGGTGGTTGTGAACAAGGCAGGGTATGTTGGGTGTAGCACTACCCCAAGAAATGCAAAGATTTACACAAGTGGTAAAGATAAAATAAGGCTTGTAAAAGGTCTTAACAGCT
TCATTTGTAGTCTACCTGGTCACTGTGGTGCTGGCATGAAGATTCAAATCTCTGCT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAAGGGAAGAGGCAGTGAAATGGTGTCAATGGCTGTGCTATGTCTACACGTGGCGGCACTTCAATGCGAGATAGCTCAGGCAGCTACTTATGCCGCCGGCGGTAATGGTGGCTGG
ACGTTTAACGTCTCCGGCTGGGAAAATGGCAAGAAGTTTAAGGCCGGCGACATCCTTGTGTTCAACTACCAAAAAGGAGCACATAATGTGGTGGTTGTGAACAAGGCAGGGTATGTTGGG
TGTAGCACTACCCCAAGAAATGCAAAGATTTACACAAGTGGTAAAGATAAAATAAGGCTTGTAAAAGGTCTTAACAGCTTCATTTGTAGTCTACCTGGTCACTGTGGTGCTGGCATGAAG
ATTCAAATCTCTGCT

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAAGG GAAGAGGCAG TGAAATGGTG TCAATGGCTG TGCTATGTCT ACACGTGGCG GCACTTCAAT GCGAGATAGC TCAGGCAGCT ACTTATGCCG CCGGCGGTAA TGGTGGCTGG ACGTTTAACG TCTCCGGCTG GGAAAATGGC AAGAAGTTTA AGGCCGGCGA CATCCTTGTG TTCAACTACC AAAAAGGAGC ACATAATGTG GTGGTTGTGA ACAAGGCAGG GTATGTTGGG TGTAGCACTA CCCCAAGAAA TGCAAAGATT TACACAAGTG GTAAAGATAA AATAAGGCTT GTAAAAGGTC TTAACAGCTT CATTTGTAGT CTACCTGGTC ACTGTGGTGC TGGCATGAAG
ATTCAAATCT CTGCTTGA

Retrieve as FASTA