Entry information : CsPrx53 (orange1.1g018855m)
Entry ID 1378
Creation 2007-09-04 (Christophe Dunand)
Last sequence changes 2011-12-13 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx53 (orange1.1g018855m)
Name (synonym) CsPrx53 (orange1.1g018855m)
Class Class III peroxidase    [Orthogroup: Prx100]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue types Callus
Flowers
Fruits
Ovaries
Roots
Seedlings
Shoot meristems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx53
start..stop
S start..stop
CclPrx20 709 0 1..349 1..349
CppPrx03 668 0 12..349 1..337
CppPrx02 645 0 10..349 1..340
CsPrx62 635 0 16..349 16..349
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1378' 'join(16351..16566,17232..17423,18133..18301,18556..19028)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 16351..16566 214 N° 2 17232..17423 190 N° 3 18133..18301 167 N° 4 18556..19028 471
join(16351..16566,17232..17423,18133..18301,18556..19028)


exon

Literature and cross-references CsPrx53 (orange1.1g018855m)
Literature Sputnik team.
Bausher,M., et al., An expressed sequence tag (EST) set from Citrus sinensis L. Osbeck whole seedlings and the implications of further perennial source investigations Plant Sci. 165, 415-422 (2003).
DNA ref. Phytozome 12:   scaffold00043 (16351..19028)
EST ref. GenBank:   CX673104 [5' end]  CX673103 [3' end]
Cluster/Prediction ref. UniGene:   Csi.5050
Protein sequence: CsPrx53 (orange1.1g018855m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   349 (324)
PWM (Da):   %s   37777.18 (35218.8)  
PI (pH):   %s   8.39 (8.40) Peptide Signal:   %s   cut: 26 range:26-349
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASLRYLLAAALVVAFVLEGSPSQAQLSPSFYSSTCPNVLNIIED
VLKKAFSSDIRIGASLIRLHFHDCFVD
GCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLK
PLTGNQGEIRLNCRRVNGNNNIATRSSSSEGDLVSSF

Retrieve as FASTA  
Remarks Complete sequence from genomic and 44 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCACTTCGTTATCTTCTTGCAGCAGCTCTTGTTGTTGCTTTTGTGCTTGAGGGATCACCATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTG
AACATTATCGAGGATGTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGAT
ATGTAAGCAATCTCTGCTCTCTCA
TTTTTCATCTTCTTTACTTTATCAAGCTCTCTGTCTATGTACTTACTGATATAACATAGTTTCAAGTATATCAATGAACAGTATCTTTATAATTTTTATGGCATTAAACAAAATATAGAG
TTTTCAGTAAGAGTTTGAATATATCATTTTAATTTCAACAACTTCCAAAACCATTTTTATTTATCTTTTTTCTTTCTCTTTACAACAAATTTTTCCTCTCTAATTCGATGTACCGAGGAC
CATGTAATTCTCTGNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCATGTACTAGAAATTTAAATCTAGCAAAGATTTGGTACAAAACAGGAAATAAAATCCACCTCATGGCCTCATCCCTG
CTGAGTTCTTTTAATGATCATGGGTCCAATATTAATGGTGTATGGTTGAAAAAAAATCACACTTGTTTTATATTCTTCCAACTGAGAAATTTAAATCAACTGGAAATCCTAGTCTTAAAA
ACATATGTAATAATAAGACAATTTAAATAAGAAGAGTTTGCATTATTTATATAATTTTTTTGAATTCCTGTCCATAAGATAAGAAGGAATCTATCTACTTGAAAAAGTAATAATACAATG
GACTGTTAACATAGCAAGTTGTTAATTAATATTATTTTTTCAGGGGTGTGATGCTTCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAATAATTC
GGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAAAGGCATGTCGAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTG
TGGTA
ATGAATTTCTATTACCAACTCCTCTTCCCAGTAAATATTTTACGCTTAGAAGTAAATTAATATGGGTATCAGAATAAGCGAACAGAATAATGATAAATCTTTGTAGTATTAATGTAGTGT
TTAACTATTTTTTTAATTAATAATAACCCATATAAATTTAACGTGTTTTTATATTATTTTTTTCAGTTAATTAAATATCCCGTAAGTTCAACTTTATCCTTAGAAGAATATATTAATTAA
ATAATTATTCACATAGAACAATGTGCAAGATCTGAGTCCACATGTTTAGCCTTTGCTAGTTATTGCATCTGCTATTCAACGACAAAATTGCCCCACCATGTGGAAATTGATTTAAGTGAA
GGGATTCATCGTTGGACCGATCATTTTTAGATTCGGACGACGTGGTGGACTCCATTATTTAAAAGGGGTGACTTATTGACTATGGTGCATCAGCTACACTGTATGGTACCAAAATTGCTA
CAAGTATGTCAATATAGTGATTATCAACGGATAAATTGTTACCGACAGTGAGACACTTTTTACTGCGCTGGTGTATCGTAGCAAGGCCTTAGTTTTAAAATTAAAAGTTTTCTTCTTTTG
TTATACGACAAAGTTTGATTCAACGGCTAGCAAATTAAATAGTCCGCCCCAAACACACATCTCTTAAGATTATTGCTGATTTTGAGTGAATGGCTTTTGGTTACAGTCAGGGGGTCCGTC
ATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATCTAATTCTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTTGG
CCTCAATGACAAGTTTGATCTTGTTGCACTCTCCG
CGGTAATTATTAATTGCTTCTACATCCTTTTAGTTACTTGAGTAAAGTTACGAGAGTAAACTTTTAGGAGTCAAAACTGCCTGCT
AATAGTAACTCATACTCAAAAATTAATTTAAGAAATGAGTGTTGGTGCCTTAAATTTATATTTACTTAACTCAAAATTTAAATAATATCCCTAACAATAAAATTATCATTATTGTTCCTC
GTATGTGAATTCAGTAAAAATAACAAAGGTTTGGTCATGCATGTTTTTCAGGAGCTCACACGTTTGGAAGGGCTCAGTGCAAATTTTTCAGTGACAGATTATACGATTTCAACAAAACTG
GCAAGCCAGACCCAACAGTGGACAGAACCCTCTTAAAGCAACTGAGGGAACTATGCCCACAGGGTGGAAACGGCGCCGTTCTTGCTAATTTTGATGTCAAAACACCTGATGCTTTCGACA
ACAAATACTTCTCCAATCTTAGACTCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTTGGGAGGAACCAGACTG
CTTTCTTTAAAAACTTTGTGATCTCAATGATAAGAATGGGCAATTTGAAACCACTGACAGGAAATCAAGGGGAGATTAGATTGAACTGCAGGAGGGTCAATGGAAACAATAATATTGCAA
CAAGATCATCATCATCGGAGGGTGATTTGGTCAGCTCTTTCTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCACTTCGTTATCTTCTTGCAGCAGCTCTTGTTGTTGCTTTTGTGCTTGAGGGATCACCATCTCAAGCTCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTG
AACATTATCGAGGATGTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGAT
GGGTGTGATGCTTCGATTTTGCTG
GACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAATAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAAAGGCATGTCGAAGGGTTGTT
TCCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTG
TCAGGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAAT
CAGAATCTTCCAGGACCATCTAATTCTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGTTTGATCTTGTTGCACTCTCCG
GAGCTCACACGTTTGGAAGGGCT
CAGTGCAAATTTTTCAGTGACAGATTATACGATTTCAACAAAACTGGCAAGCCAGACCCAACAGTGGACAGAACCCTCTTAAAGCAACTGAGGGAACTATGCCCACAGGGTGGAAACGGC
GCCGTTCTTGCTAATTTTGATGTCAAAACACCTGATGCTTTCGACAACAAATACTTCTCCAATCTTAGACTCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGT
GCCGATACCGCTGCCATTGTCGAGGACTTTGGGAGGAACCAGACTGCTTTCTTTAAAAACTTTGTGATCTCAATGATAAGAATGGGCAATTTGAAACCACTGACAGGAAATCAAGGGGAG
ATTAGATTGAACTGCAGGAGGGTCAATGGAAACAATAATATTGCAACAAGATCATCATCATCGGAGGGTGATTTGGTCAGCTCTTTCTAA

Retrieve as FASTA