View Redoxidase 13780

Entry information : HaRboh04 (HanXRQChr05g0155831)

Entry ID	13780
Creation	2016-06-01 (Christophe Dunand)
Last sequence changes	2016-06-01 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaRboh04 (HanXRQChr05g0155831)

Name (synonym)

HaRboh04 (HanXRQChr05g0155831)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaRboh04 start..stop	S start..stop
HaRboh11	1688	0	26..930	13..913
HaRboh01	1556	0	25..930	14..917
HaRboh10	1526	0	1..930	3..928
NbRboh02	1493	0	25..930	16..939

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '13780' 'complement(join(191010075..191010184,191010446..191010990,191011099..191011166,191011427..191011529,191011619..191011734,191011846..191011941,191012026..191012409,191012733..191013155,191013257..191013370,191013610..191013658,191014041..191014203,191014291..191014912))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	191014291..191014912	620	N° 2	191014041..191014203	161	N° 3	191013610..191013658	47	N° 4	191013257..191013370	112
N° 5	191012733..191013155	421	N° 6	191012026..191012409	382	N° 7	191011846..191011941	94	N° 8	191011619..191011734	114
N° 9	191011427..191011529	101	N° 10	191011099..191011166	66	N° 11	191010446..191010990	543	N° 12	191010075..191010184	108
complement(join(191010075..191010184,191010446..191010990,191011099..191011166,1 91011427..191011529,191011619..191011734,191011846..191011941,191012026..1910124 09,191012733..191013155,191013257..191013370,191013610..191013658,191014041..191 014203,191014291..191014912))

Literature and cross-references HaRboh04 (HanXRQChr05g0155831)

DNA ref.	HanXRQ genome: HanXRQChr05 (191014912..191010075)
Cluster/Prediction ref.	HanXRQ: HanXRQChr05g0155831

Protein sequence: HaRboh04 (HanXRQChr05g0155831)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	930
PWM (Da):	103800.02	Transmb domain:	o371-393i513-535o555-577i735-752o
PI (pH):	8.86

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MQKMGIPDDVGDVSDGLPESTSRRSDSEVFGTDRKAFSGPLNKRGTRKSARFNVPDDAGSSIASGSLRSKNDDDEYVEVTLDVGDDSVAVHSVKTAGGADVEDPELALLAKGLGKRSSLG
ASMVRNASSKIRQVSEELRKMTTSFSRRTPVGRYDRSKSAATHALIGLKFISKTDGAAAWAALEKRFDDLTAGTNGLLPRALFGECIGMNKDSKDFAGELFDALSRRRNITGAVINKAQL
KEFWDQIADQSFDSRLQTFFDMVDKDADGRISEEEVRIISLSASANKLSKIQTQADEYAALIMEELDPDNLGYIMIESLETLLLQSPTQTVRGESKNLSIMLSQKLRNVTDRNIIQRGYD
GFKYFLQDNWQRVWVIALWIGAMAGLFTWKYIQYKNRAAFDVMGHCVCVAKGAAETLKLNMALILLPVCRNTITWLRNKTKLGVVVPFDDNLNFHKVIAVGIMIGVGLHAISHLACDFPR
LLSATEEEYEPMVQYFGEQPDSYWHFVKEAEGYTGITMVVLMAIAFTLATPWLRRGRLNLPKPLKKLTGFNAFWYSHHLFIIVYTLLIVHGIKLYLTKEWYKKTTWMYLAVPILLYMCER
LIRALRSSVKPVQILKVAVYPGNVLALHMSKPHGFKYKSGQYMFVNCKAVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTRQLKTVFSVCQPPANGKSGLLRADNQGDNPSFPKVLIDGP
YGAPAQDYKKYDVVLLVGLGIGATPMISIVKDIVNNMKANQEEDEALESGNNNAMPPMSPQSKKNSASNFKTTRAYFYWVTREQGSFDWFKGVMNEVAEIDHDGVIEMHNYCTSVYEEGD
ARSALITMLQSLNHAKNGVDVISGTRVKSHFAKPNWRSVYKRIALTHNAQRGVFYCGAPAPVKELKQLAADFSHKTSTKFDFHKENF

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCAAAAAATGGGTATTCCCGATGACGTCGGTGACGTCAGCGACGGGTTACCGGAGAGTACCAGCCGTCGTTCCGACTCCGAGGTTTTTGGAACCGACAGAAAGGCGTTCAGCGGGCCG
TTAAACAAGCGAGGAACTCGCAAAAGTGCACGATTTAATGTTCCCGATGATGCCGGTAGTAGCATCGCGAGTGGAAGTTTGCGGTCGAAAAACGACGATGATGAGTACGTGGAAGTTACG
TTAGATGTCGGCGATGATTCGGTTGCGGTCCACAGTGTGAAGACTGCGGGTGGCGCTGACGTGGAGGACCCAGAGTTGGCTTTGTTGGCTAAAGGGTTGGGAAAGAGGAGTTCTTTGGGC
GCGTCCATGGTGAGGAACGCGTCCTCCAAAATCCGCCAGGTGTCCGAAGAGCTTAGAAAAATGACTACGTCGTTTTCTAGACGGACACCTGTCGGACGGTATGACAGGAGTAAGTCCGCG
GCCACTCATGCTCTTATTGGGCTGAAGTTCATCAGTAAAACTGATGGGGCGGCCGCTTGGGCCGCCCTTGAGAAGCGGTTTGATGATCTCACCGCGGGTACTAACGGTTTACTTCCCCGG
GCACTTTTTGGAGAATGCATTGGTAAACTTATAACTCAAAACTTCTTTTTTTCTTTAATTTTGTTGTGTGATTTTATTTAATTATGGTTATTTATTTACAATCCGGCAGGGGGATGAACA
AGGATTCGAAAGACTTTGCCGGAGAACTCTTCGATGCACTTAGCCGCAGACGGAATATCACCGGAGCCGTGATTAACAAAGCTCAGTTAAAGGAGTTTTGGGACCAAATTGCTGATCAAA
GTTTTGATTCAAGGCTCCAAACTTTCTTTGACATGTAAGAATTTATAATAATTTTTTGAGTAAATTGCCAAAATCGTCCCTGAGGTTTGGGCATTTTTGTCATTTTCATTCAAAACAACT
TTTTTGTACAATATAGTCCTTCACTTTTAGGATTTTTTGTCATTTTCATCCAAACATCTAATTTGTTTTATTTTTTATATCAAACATTTGGATGAAAATAGCAAAAAATCCCAACTCTCA
GGGACGATTTTGGCAAAAAAAAGTCAGACGTCTGGATGAAAATGACAGACATGCCCAAACCTCAGGGGTGATTTTGGCAATTTACACTATTTTTTTTAAATAAATGTAGTAAAATTATTT
TTGGTTTTAGTTATTGATTTGAAAAATGTTATACTAATTCAAGAACATAAATATAGGGGGTTGATAAAGATGCGGATGGCCGAATCAGTGAAGAGGAAGTTCGAGAGGTATGATCTATGA
TTTCTTCTTTGAATCATGTCACGTTGACATGTCAACAGATGAACTTAAACACGACTCGTATAATTGTTCATGTTAAATATATCGATCACAACTGAGACACACTTTATATAGTTAGACCAA
GATGATTGTATTATGGTACGGTCCATGTATCTAAACGAGTCAAACAAGTTTTGATGATTTTTTAGTTGTATCTAATTTTTTAAAAATTATTTGTATAATACGACAGATATTATAAGCTTG
AGTGCTTCGGCAAACAAGTTATCAAAAATACAAACACAAGCAGATGAATATGCGGCATTGATCATGGAAGAATTGGACCCGGACAACCTTGGTTACATCATGGTATACATTCTTAATCAT
TCTACTTCAACTACATTTGATATAACTCCTTAAAAACATTAAAAAGACGATTAACAATACATTTTTGCGTTTCGAAAAACCAGATATTGAGAGCTTGGAGACCCTTTTACTGCAATCGCC
GACACAAACAGTGAGAGGCGAAAGCAAAAATCTGAGCATTATGTTGAGCCAAAAGCTCAGAAATGTGACCGATAGGAACATTATACAACGCGGGTATGATGGGTTTAAGTACTTTTTACA
AGACAACTGGCAAAGAGTTTGGGTGATTGCACTTTGGATTGGGGCGATGGCGGGTTTGTTTACTTGGAAATATATTCAGTACAAAAATCGCGCTGCGTTTGATGTAATGGGGCACTGTGT
TTGTGTCGCTAAAGGTGCGGCTGAGACGCTTAAGTTAAACATGGCTTTGATTTTGTTACCCGTGTGTCGAAACACCATCACTTGGCTTAGGAACAAGACCAAACTTGGCGTTGTGGTTCC
CTTTGATGATAATCTCAATTTCCACAAAGTGAGTATCTTGTGAATGTTTTGCGTATCACAACAAACAGAGGGCTTTCAGCGACAGACATATCTGTTATTGACCCCCCATGGAAGGGGGAG
GCCGTCAGTAATCACCAAGAGAATAATGACAGATACTATAAATACATTTATGTATATATAATTTGTGGTTTTGACTAACTGTCGATTATATGTCGGTGATCACTGACGGATACATCACTC
GATGATGTTTTCATCGTTGAAAGTTAATTGTCTAGTAGAATTAGATTTAATGTTCTTTGTAATTCATTAACTTCCATGTCATCTCACACTTAACTTCTATTGGTACACTAGGTGTGATCG
CTGTCGGGATCATGATTGGAGTCGGGCTCCATGCGATTTCGCATTTAGCGTGTGATTTCCCTCGACTTCTTAGTGCAACCGAAGAGGAGTATGAACCAATGGTTCAATATTTCGGGGAAC
AACCCGATAGCTATTGGCATTTTGTGAAGGAAGCAGAAGGGTATACCGGGATCACGATGGTGGTTTTAATGGCAATAGCCTTTACTTTAGCGACCCCGTGGCTAAGGCGTGGTAGACTGA
ACCTACCAAAACCGCTAAAGAAACTCACGGGTTTTAACGCCTTTTGGTACTCGCACCACCTATTCATTATTGTTTATACTTTGCTCATAGTTCACGGGATCAAACTTTACCTCACGAAAG
AATGGTACAAGAAGACGGTGAGTACAAACAAACGTTATAGGATTCGCTTGTGTGTACGTTTTCGCGATTGTTGAACTTATCGTTTTCTTCTTTAATGATAGACACTTGGATGTACTTGGC
GGTTCCGATTTTGCTTTATATGTGTGAGAGGTTAATCCGGGCGTTAAGATCTAGCGTCAAGCCTGTTCAGATATTAAAGGTAACGATCACATAGTGGTCATGTCACATGTCGCATGTCAC
ATGTCACATGTCACAGGGTCAGGTTGGGTTGACCTGAAACACTTGACTGACATAATTTTTGGTTTTGAAGGTGTGGCTGTTTACCCGGGAAACGTGTTGGCACTTCACATGTCGAAGCCT
CATGGCTTTAAATACAAAAGTGGGCAGTACATGTTTGTGAACTGCAAGGCGGTTTCTCCATTTGAATGGTGAGTCTTGTGCGTAGAAAGGGTTTAAAATGCTTGTTTTTCAAATAAATAT
GTCTTGTAAGTTGTAAATTGACTTAATCATGGCTCAGGCGCACCCGTTTTCGATAACTTCAGCACCAGGAGATGACTACTTAAGTGTGCATATCCGAACCCTCGGTGACTGGACCCGACA
ACTAAAAACGGTCTTCTCTCAGGTATGTGTTTGAGCAACAAAATAGCGTAGTAAAAAGGATCAAGACAGATACACTTAGTAATAACTAGCTTGTCATATACTATTATAAGGTTATATAGT
TTTAATAACAATTAAATTTTTTGACCCAAAACCGCATAACTTGTCACAGAAGTGTTAGAAATTGTCGTGATAGTTTTGTTGTAGTGATATACGTGTTTGGCCCGTTAGTCATAAAACATA
ACCCGTTTCCTTTTTAACTGACTCGGTTTTGGTCGTGTGTAGGTGTATGCCAACCACCAGCTAACGGTAAAAGTGGACTCCTAAGAGCTGATAACCAAGGAGACAACCCGAGGTAAGTTC
TCATTGTTACAATTATATCGCGTTATTAAACCATCAACAACAACAATCGTTAATAAAAAAGTAACCGACACGATTCCTAACTCTTTTGATCAAATTACAGTTTTTCCCAAAGGTTCTAAT
CGACGGGCCATATGGTGCACCAGCACAAGACTACAAGAAATATGATGTAGTGTTGTTGGTCGGGTTAGGCATCGGTGCAACCCCTATGATCAGTATCGTTAAAGACATCGTGAACAACAT
GAAAGCGAACCAAGAGGAAGACGAGGCTTTGGAGAGCGGCAACAACAACGCAATGCCGCCAATGTCACCACAGTCGAAAAAGAACTCCGCGAGCAACTTCAAGACAACACGGGCTTACTT
CTATTGGGTCACAAGGGAACAAGGGTCATTTGATTGGTTTAAAGGGGTGATGAACGAGGTTGCGGAAATTGATCACGATGGTGTGATCGAGATGCATAACTATTGCACAAGTGTCTACGA
AGAAGGTGATGCTAGATCCGCTTTGATCACGATGCTTCAGTCGCTAAATCATGCCAAAAATGGTGTTGATGTAATTTCGGGTACTCGGGTCAAGTCTCACTTTGCAAAGCCCAATTGGAG
AAGCGTTTATAAGCGGATTGCTCTTACTCACAACGCTCAACGTATAGGTGAGTTATTTTCTTCTATTATTCAAGTTTTATGAAAATTATACAATTGTTAAATTAAATACGGGCCGGTTCA
ACCAGTTTTGACAAAATTTATGGATCGAGCCTTTAGCTTCCGTTTTGAAAAACGACAAACCAAACAAGCCTGGATGAGTGGGTCCGCCGGTTCAACCAAACATATATTACATTAACCCAT
TTTGACCCTTTACCGAATGTGTGTTGCGCCATAAAATCTTATATAACATTTTGTTTTTTAAATTACAGGGGGGTATTTTATTGTGGAGCACCAGCGCCAGTCAAAGAGTTGAAACAACTT
GCTGCTGACTTTTCTCACAAGACTAGCACCAAATTTGACTTTCACAAGGAGAACTTTTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

TTCACACACC CCCCTTCAAC TCATATTTTC AAGCTTCAAT CACCAAACAT CATCTAATCT TTTCTTATTT TAAAACGTTT TTGAGTTCCG AATCGAATCG AATGCAAAAA ATGGGTATTC CCGATGACGT CGGTGACGTC AGCGACGGGT TACCGGAGAG TACCAGCCGT CGTTCCGACT CCGAGGTTTT TGGAACCGAC AGAAAGGCGT TCAGCGGGCC GTTAAACAAG CGAGGAACTC GCAAAAGTGC ACGATTTAAT GTTCCCGATG ATGCCGGTAG TAGCATCGCG AGTGGAAGTT TGCGGTCGAA AAACGACGAT GATGAGTACG TGGAAGTTAC GTTAGATGTC GGCGATGATT CGGTTGCGGT CCACAGTGTG AAGACTGCGG GTGGCGCTGA CGTGGAGGAC CCAGAGTTGG CTTTGTTGGC TAAAGGGTTG GGAAAGAGGA GTTCTTTGGG CGCGTCCATG GTGAGGAACG CGTCCTCCAA AATCCGCCAG GTGTCCGAAG AGCTTAGAAA AATGACTACG TCGTTTTCTA GACGGACACC TGTCGGACGG TATGACAGGA GTAAGTCCGC GGCCACTCAT GCTCTTATTG GGCTGAAGTT CATCAGTAAA ACTGATGGGG CGGCCGCTTG GGCCGCCCTT GAGAAGCGGT TTGATGATCT CACCGCGGGT ACTAACGGTT TACTTCCCCG GGCACTTTTT GGAGAATGCA TTGGGATGAA CAAGGATTCG AAAGACTTTG CCGGAGAACT CTTCGATGCA CTTAGCCGCA GACGGAATAT CACCGGAGCC GTGATTAACA AAGCTCAGTT AAAGGAGTTT TGGGACCAAA TTGCTGATCA AAGTTTTGAT TCAAGGCTCC AAACTTTCTT TGACATGGTT GATAAAGATG CGGATGGCCG AATCAGTGAA GAGGAAGTTC GAGAGATTAT AAGCTTGAGT GCTTCGGCAA ACAAGTTATC AAAAATACAA ACACAAGCAG ATGAATATGC GGCATTGATC ATGGAAGAAT TGGACCCGGA CAACCTTGGT TACATCATGA TTGAGAGCTT GGAGACCCTT TTACTGCAAT CGCCGACACA AACAGTGAGA GGCGAAAGCA AAAATCTGAG CATTATGTTG AGCCAAAAGC TCAGAAATGT GACCGATAGG AACATTATAC AACGCGGGTA TGATGGGTTT AAGTACTTTT TACAAGACAA CTGGCAAAGA GTTTGGGTGA TTGCACTTTG GATTGGGGCG ATGGCGGGTT TGTTTACTTG GAAATATATT CAGTACAAAA ATCGCGCTGC GTTTGATGTA ATGGGGCACT GTGTTTGTGT CGCTAAAGGT GCGGCTGAGA CGCTTAAGTT AAACATGGCT TTGATTTTGT TACCCGTGTG TCGAAACACC ATCACTTGGC TTAGGAACAA GACCAAACTT GGCGTTGTGG TTCCCTTTGA TGATAATCTC AATTTCCACA AAGTGATCGC TGTCGGGATC ATGATTGGAG TCGGGCTCCA TGCGATTTCG CATTTAGCGT GTGATTTCCC TCGACTTCTT AGTGCAACCG AAGAGGAGTA TGAACCAATG GTTCAATATT TCGGGGAACA ACCCGATAGC TATTGGCATT TTGTGAAGGA AGCAGAAGGG TATACCGGGA TCACGATGGT GGTTTTAATG GCAATAGCCT TTACTTTAGC GACCCCGTGG CTAAGGCGTG GTAGACTGAA CCTACCAAAA CCGCTAAAGA AACTCACGGG TTTTAACGCC TTTTGGTACT CGCACCACCT ATTCATTATT GTTTATACTT TGCTCATAGT TCACGGGATC AAACTTTACC TCACGAAAGA ATGGTACAAG AAGACGACTT GGATGTACTT GGCGGTTCCG ATTTTGCTTT ATATGTGTGA GAGGTTAATC CGGGCGTTAA GATCTAGCGT CAAGCCTGTT CAGATATTAA AGGTGGCTGT TTACCCGGGA AACGTGTTGG CACTTCACAT GTCGAAGCCT CATGGCTTTA AATACAAAAG TGGGCAGTAC ATGTTTGTGA ACTGCAAGGC GGTTTCTCCA TTTGAATGGC ACCCGTTTTC GATAACTTCA GCACCAGGAG ATGACTACTT AAGTGTGCAT ATCCGAACCC TCGGTGACTG GACCCGACAA CTAAAAACGG TCTTCTCTCA GGTATGCCAA CCACCAGCTA ACGGTAAAAG TGGACTCCTA AGAGCTGATA ACCAAGGAGA CAACCCGAGT TTCCCAAAGG TTCTAATCGA CGGGCCATAT GGTGCACCAG CACAAGACTA CAAGAAATAT GATGTAGTGT TGTTGGTCGG GTTAGGCATC GGTGCAACCC CTATGATCAG TATCGTTAAA GACATCGTGA ACAACATGAA AGCGAACCAA GAGGAAGACG AGGCTTTGGA GAGCGGCAAC AACAACGCAA TGCCGCCAAT GTCACCACAG TCGAAAAAGA ACTCCGCGAG CAACTTCAAG ACAACACGGG CTTACTTCTA TTGGGTCACA AGGGAACAAG GGTCATTTGA TTGGTTTAAA GGGGTGATGA ACGAGGTTGC GGAAATTGAT CACGATGGTG TGATCGAGAT GCATAACTAT TGCACAAGTG TCTACGAAGA AGGTGATGCT AGATCCGCTT TGATCACGAT GCTTCAGTCG CTAAATCATG CCAAAAATGG TGTTGATGTA ATTTCGGGTA CTCGGGTCAA GTCTCACTTT GCAAAGCCCA ATTGGAGAAG CGTTTATAAG CGGATTGCTC TTACTCACAA CGCTCAACGT ATAGGGGTAT TTTATTGTGG AGCACCAGCG CCAGTCAAAG AGTTGAAACA ACTTGCTGCT GACTTTTCTC ACAAGACTAG CACCAAATTT GACTTTCACA
AGGAGAACTT TTAACTTTAG AGATAATTTA ATCATTTATT AAATAAAATT ATTTTAATTG TTGAAATTTG TATGTATGAC CCAATTCGGA CCTAGTATCT CGT

Retrieve as FASTA