Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
381 (360) |
PWM (Da): |
40708.27 (38383.1) |
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PI (pH): |
4.23 (4.17) |
Peptide Signal: |
cut: 22 range:22-381 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MDRRGISSVF YVCAIVWAIS ARPIQSTWLS EDYYSAECPD LMQIMKDAMN VTAENDPVNL PALLRLFAHD AMVNGVDGSV LLDSKPGAKL PADKAEKDAP INLSLFGFEA VEFLKGEVEM
ACPGVVSCAD VLTIAAQIAV EMTGGPVYQS LLGRRDGKVS RYQDAVAQLP TETMSLDQLN ANFASMGLDQ NDLVVLSGAH TIGFAHCESF AKRIYNFSST DPIDPTMDWT LADQLKHVCP
QKADPNTVQA LDITTIETFD ENFYFNLQIN EGILASDQIL YTSETTSPLV DLFAVDKTAF FDSFVTSMIK LGNIGVLTGT QGEIREVCSV VNPSPPPPPS PPPPPKASPP PPPPKASPPP
PPKASPPPPS PSPPPPSAPP A
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns, contig_679:10179-11719) and RNA seq (HMHL_Marchantia_paleacea-non_mycorrizal_proteins_155) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGACCGAA GGGGGATTTC CAGTGTGTTC TATGTATGTG CAATAGTGTG GGCTATTTCT GCCAGGCCAA TTCAGTCGAC ATGGCTGTCG GAGGACTACT ACTCTGCCGA ATGTCCAGAT
TTGATGCAAA TCATGAAAGA CGCTATGAAC GTCACCGCAG AAAACGACCC CGTCAATTTG CCGGCCCTCC TTCGTCTCTT CGCCCACGAC GCCATGGTCA ATGTAAGATG TGGGAAAATG
CGTTCAGCCA GGCTCTAGAA TGGTGACTAA AAGTGGCATT GCGATCCCTC CTCCGCTGAA TTGTGAAGCT AATGAGGTGC TGCTGTCGTC GTCTGTGCAG GGTGTCGATG GTTCCGTTTT
GCTGGATTCA AAGCCGGGCG CCAAGCTCCC AGCAGACAAG GCCGAGAAAG ACGCTCCGAT CAACCTGTCG CTCTTCGGGT TCGAAGCCGT GGAATTCTTG AAGGGCGAAG TCGAAATGGC
TTGCCCAGGG GTCGTCTCCT GCGCCGACGT ACTCACCATC GCTGCGCAAA TAGCGGTTGA AATGGTAAGC GCTTCGATTC AGGATTTGTT CCAGTGCGCA GACTCTTACC CACAAATTTA
CAGCGATTCA AATTGAGCTT TCTCCCGCAC GACAAAGAAA TTTCGATTCG TGTAAATTTT CCTCCTCAAC CTTCGTTTCT GTGCGTGTTC CAGACCGGGG GCCCGGTGTA CCAGTCTCTT
CTGGGACGCC GCGACGGTAA AGTGTCACGA TACCAAGATG CCGTTGCTCA GTTGCCCACC GAGACCATGA GCTTGGACCA GCTGAACGCC AACTTCGCAT CCATGGGCCT CGATCAAAAC
GACCTGGTTG TTCTGAGTGG TACATAATGA GCTGTACTTT GGTTTACTCG ATAGTGTGGA AGACTGCATG CATTTGGGGC AAGTTGACGG AAGAAATCAA TCTGCATTGG TGGCTGACTG
GCCGGTCAAT TCTCGTTTGA TATGCAGGTG CACATACCAT TGGATTTGCT CACTGCGAGT CGTTCGCGAA GAGGATCTAT AACTTTAGCT CGACGGATCC AATTGATCCG ACCATGGACT
GGACCTTGGC CGATCAGTTG AAGCATGTGT GCCCTCAGAA GGCTGATCCT AACACCGTCC AAGCCCTGGA CATCACGACC ATCGAGACTT TTGATGAGAA TTTCTACTTC AATCTGCAGA
TTAATGAGGG AATTTTGGCT TCGGATCAGA TTCTGTACAC AAGTGAAACC ACATCTCCCC TGGTGGACCT ATTCGCCGTT GACAAAACCG CCTTCTTCGA CTCTTTCGTT ACGTCCATGA
TCAAGCTGGG TAACATTGGT GTGCTCACCG GTACCCAAGG AGAAATCAGA GAAGTTTGCA GTGTGGTGAA CCCATCACCG CCACCACCAC CTTCTCCCCC ACCACCACCA AAGGCTTCTC
CACCACCACC ACCACCAAAG GCATCCCCTC CACCCCCACC CAAGGCTTCA CCCCCACCCC CATCACCATC CCCACCACCA CCATCCGCAC CCCCAGCTTA G
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGACCGAA GGGGGATTTC CAGTGTGTTC TATGTATGTG CAATAGTGTG GGCTATTTCT GCCAGGCCAA TTCAGTCGAC ATGGCTGTCG GAGGACTACT ACTCTGCCGA ATGTCCAGAT
TTGATGCAAA TCATGAAAGA CGCTATGAAC GTCACCGCAG AAAACGACCC CGTCAATTTG CCGGCCCTCC TTCGTCTCTT CGCCCACGAC GCCATGGTCA ATGGTGTCGA TGGTTCCGTT
TTGCTGGATT CAAAGCCGGG CGCCAAGCTC CCAGCAGACA AGGCCGAGAA AGACGCTCCG ATCAACCTGT CGCTCTTCGG GTTCGAAGCC GTGGAATTCT TGAAGGGCGA AGTCGAAATG
GCTTGCCCAG GGGTCGTCTC CTGCGCCGAC GTACTCACCA TCGCTGCGCA AATAGCGGTT GAAATGACCG GGGGCCCGGT GTACCAGTCT CTTCTGGGAC GCCGCGACGG TAAAGTGTCA
CGATACCAAG ATGCCGTTGC TCAGTTGCCC ACCGAGACCA TGAGCTTGGA CCAGCTGAAC GCCAACTTCG CATCCATGGG CCTCGATCAA AACGACCTGG TTGTTCTGAG TGGTGCACAT
ACCATTGGAT TTGCTCACTG CGAGTCGTTC GCGAAGAGGA TCTATAACTT TAGCTCGACG GATCCAATTG ATCCGACCAT GGACTGGACC TTGGCCGATC AGTTGAAGCA TGTGTGCCCT
CAGAAGGCTG ATCCTAACAC CGTCCAAGCC CTGGACATCA CGACCATCGA GACTTTTGAT GAGAATTTCT ACTTCAATCT GCAGATTAAT GAGGGAATTT TGGCTTCGGA TCAGATTCTG
TACACAAGTG AAACCACATC TCCCCTGGTG GACCTATTCG CCGTTGACAA AACCGCCTTC TTCGACTCTT TCGTTACGTC CATGATCAAG CTGGGTAACA TTGGTGTGCT CACCGGTACC
CAAGGAGAAA TCAGAGAAGT TTGCAGTGTG GTGAACCCAT CACCGCCACC ACCACCTTCT CCCCCACCAC CACCAAAGGC TTCTCCACCA CCACCACCAC CAAAGGCATC CCCTCCACCC
CCACCCAAGG CTTCACCCCC ACCCCCATCA CCATCCCCAC CACCACCATC CGCACCCCCA GCTTAG
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Retrieve as FASTA
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