Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
324 (301) |
| PWM (Da): |
35205.85 (32902.6) |
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| PI (pH): |
6.06 (5.78) |
Peptide Signal: |
cut: 24 range:24-324 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAPTRSILSV VALTLLVHGS ADAINQDYLK DNFYDQLCPD AEYVIQKAVF AELDKNLRNA AGVIRLQFHD CFVGGCEASV LLDGVDTEKS SVSAHLRGFE VVDAAKRAVE AICPGVVSCA
DVLAYAARDS AIKLNATGWA VQGGRKDGLL SFSVAAAEEE IPSPDLDVTQ LIENFARKGL STRQMVILSG SHTSGVGHCD KFTDRLYNFS AACPTDPSLN PKYAEELKKK CPESTFNKSI
QISMDSITPL ALDSNYFVGL KKRKGLFTSD QSLFEDLRTR DIVKSLVDKG RFDFEFGEAM RAMGAIEVKA QGQIRQNCRK VNPW
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic and (3 introns, contig_5554:42289-44086) and RNA seq (HMHL_Marchantia_paleacea-non_mycorrizal_proteins_259 and isotig28546) |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCACCAA CCAGGAGTAT ACTGTCAGTG GTCGCATTGA CTCTACTCGT TCATGGTTCA GCGGATGCTA TAAACCAGGA TTATTTGAAG GACAACTTCT ACGATCAGCT ATGCCCTGAT
GCCGAATATG TGATCCAAAA AGCAGTCTTT GCTGAGCTTG ACAAGAATTT GCGTAATGCG GCCGGGGTCA TTCGCTTGCA ATTCCACGAT TGCTTCGTCG GGGTGAGTTC TTACCACTCT
TCTGACTAAA AAATTGAGCC TAGCTGAACG AAAAATTATC AATCCCCACA TTCAAAACTG CTTTTCTAGC CTTCAGTCCC CTTATGATTA AAAGACTAAG TCTTGGTCTA CTTTGTGTTA
CGTCTGTCCA TAAATTTGCA CACAGACTGC AATGCCTAAG ATATAAGAGC GAACTTTCGC TGAGTTTTAT TAAGAGGACC ATGTGCATCT TACCGTCTAA GGATGGGTTT GGATCCATCT
CATGCTATAA TACAGGGCTG TGAAGCTTCT GTGTTGCTGG ATGGAGTTGA CACAGAGAAA TCTTCCGTCA GCGCACACCT CAGGGGTTTC GAAGTGGTGG ATGCTGCCAA GAGAGCGGTC
GAGGCCATCT GCCCCGGCGT TGTTTCTTGC GCAGATGTCT TGGCCTATGC AGCTCGTGAC AGCGCCATTA AGGTGAGAAT TTGCAGCCAA AAACATAATG TGGAGCTTCG GCTGGAACAC
GAAGTAAATT GAACGCAATT AAAGTGTGAT ACGAGTCAGG AGAAGACACT GCTCCTACCG ATTCTCACGA TCTCATCGCT ACGATTCAAT CTTCCGAATG TCGTTATCGG AAGAGTCAGT
CGATTGATTC TGTACTACTA ACTCCCCACC GGCCACTGTA CTGTAAAGAA TATCCGTCGG CGATATTCAT TATTTCATTC AGTTTAAGAT GGAAATGCAC GAAGTGATGA TTTTCCAACA
GATGCAAAGG CACAAGCTTA TTGCACCGCT AGTCAAATGG TTTACGACTC AACTGGGATA TTAGTAATCG AATTGCCATC GCGGCCTTCT TGTCAAATTC ATCGTCAATT TTGGGTTGCA
GTTAAATGCT ACAGGTTGGG CTGTGCAAGG AGGAAGGAAA GACGGACTCT TGTCATTCTC CGTGGCAGCA GCGGAAGAGG AAATCCCATC ACCGGACTTG GATGTGACGC AGTTGATTGA
GAACTTCGCC AGAAAAGGTT TATCCACGAG GCAGATGGTC ATCCTTTCAG GTCCAAGTTT CAAAATTGAA ACACTCCGTA GATGAAACTT TCAAGGTTTT AGAAGCTCGT CTGTTGGCAG
TCGGAAGTGA AACCTAACAC CTCGGAAATG TCAAGGAGCT GATTCCGTGC GTTTCTTACG AACCCTTGCA GGATCGCACA CCTCGGGAGT AGGGCACTGT GACAAATTCA CCGACCGCCT
TTACAACTTC AGCGCAGCGT GTCCGACGGA TCCGTCTTTG AACCCGAAGT ACGCCGAGGA GCTGAAGAAG AAATGCCCGG AATCGACATT CAACAAAAGC ATCCAGATAT CCATGGACTC
CATCACGCCT CTGGCCTTGG ACTCCAACTA CTTCGTGGGA CTCAAGAAGC GCAAGGGTTT ATTCACATCC GATCAGTCGC TCTTCGAGGA CCTGCGCACG AGAGATATCG TCAAGTCCCT
GGTAGACAAA GGCCGCTTCG ATTTCGAATT CGGTGAAGCC ATGCGCGCCA TGGGAGCCAT CGAGGTCAAA GCCCAAGGCC AAATCCGCCA AAACTGCCGC AAAGTGAACC CGTGGTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCACCAA CCAGGAGTAT ACTGTCAGTG GTCGCATTGA CTCTACTCGT TCATGGTTCA GCGGATGCTA TAAACCAGGA TTATTTGAAG GACAACTTCT ACGATCAGCT ATGCCCTGAT
GCCGAATATG TGATCCAAAA AGCAGTCTTT GCTGAGCTTG ACAAGAATTT GCGTAATGCG GCCGGGGTCA TTCGCTTGCA ATTCCACGAT TGCTTCGTCG GGGGCTGTGA AGCTTCTGTG
TTGCTGGATG GAGTTGACAC AGAGAAATCT TCCGTCAGCG CACACCTCAG GGGTTTCGAA GTGGTGGATG CTGCCAAGAG AGCGGTCGAG GCCATCTGCC CCGGCGTTGT TTCTTGCGCA
GATGTCTTGG CCTATGCAGC TCGTGACAGC GCCATTAAGT TAAATGCTAC AGGTTGGGCT GTGCAAGGAG GAAGGAAAGA CGGACTCTTG TCATTCTCCG TGGCAGCAGC GGAAGAGGAA
ATCCCATCAC CGGACTTGGA TGTGACGCAG TTGATTGAGA ACTTCGCCAG AAAAGGTTTA TCCACGAGGC AGATGGTCAT CCTTTCAGGA TCGCACACCT CGGGAGTAGG GCACTGTGAC
AAATTCACCG ACCGCCTTTA CAACTTCAGC GCAGCGTGTC CGACGGATCC GTCTTTGAAC CCGAAGTACG CCGAGGAGCT GAAGAAGAAA TGCCCGGAAT CGACATTCAA CAAAAGCATC
CAGATATCCA TGGACTCCAT CACGCCTCTG GCCTTGGACT CCAACTACTT CGTGGGACTC AAGAAGCGCA AGGGTTTATT CACATCCGAT CAGTCGCTCT TCGAGGACCT GCGCACGAGA
GATATCGTCA AGTCCCTGGT AGACAAAGGC CGCTTCGATT TCGAATTCGG TGAAGCCATG CGCGCCATGG GAGCCATCGA GGTCAAAGCC CAAGGCCAAA TCCGCCAAAA CTGCCGCAAA
GTGAACCCGT GGTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGAGCCTCTG ACCTGCATCA GGGTCTGACT GCAGTGCTAA GACTGCTCGG GAACTCGATC AGTGAATGCT TTTGCCCGAA GCTCCACTGG CTGACTGCTT GGATTGTAGA GCTCGTGTCC
GTTCAATCCA TACCAATCAT CTCAGACAGT AGGAAGTAGT TTACCTTACA AAGCATGGCA CCAACCAGGA GTATACTGTC AGTGGTCGCA TTGACTCTAC TCGTTCATGG TTCAGCGGAT
GCTATAAACC AGGATTATTT GAAGGACAAC TTCTACGATC AGCTATGCCC TGATGCCGAA TATGTGATCC AAAAAGCAGT CTTTGCTGAG CTTGACAAGA ATTTGCGTAA TGCGGCCGGG
GTCATTCGCT TGCAATTCCA CGATTGCTTC GTCGGGGGCT GTGAAGCTTC TGTGTTGCTG GATGGAGTTG ACACAGAGAA ATCTTCCGTC AGCGCACACC TCAGGGGTTT CGAAGTGGTG
GATGCTGCCA AGAGAGCGGT CGAGGCCATC TGCCCCGGCG TTGTTTCTTG CGCAGATGTC TTGGCCTATG CAGCTCGTGA CAGCGCCATT AAGTTAAATG CTACAGGTTG GGCTGTGCAA
GGAGGAAGGA AAGACGGACT CTTGTCATTC TCCGTGGCAG CAGCGGAAGA GGAAATCCCA TCACCGGACT TGGATGTGAC GCAGTTGATT GAGAACTTCG CCAGAAAAGG TTTATCCACG
AGGCAGATGG TCATCCTTTC AGGATCGCAC ACCTCGGGAG TAGGGCACTG TGACAAATTC ACCGACCGCC TTTACAACTT CAGCGCAGCG TGTCCGACGG ATCCGTCTTT GAACCCGAAG
TACGCCGAGG AGCTGAAGAA GAAATGCCCG GAATCGACAT TCAACAAAAG CATCCAGATA TCCATGGACT CCATCACGCC TCTGGCCTTG GACTCCAACT ACTTCGTGGG ACTCAAGAAG
CGCAAGGGTT TATTCACATC CGATCAGTCG CTCTTCGAGG ACCTGCGCAC GAGAGATATC GTCAAGTCCC TGGTAGACAA AGGCCGCTTC GATTTCGAAT TCGGTGAAGC CATGCGCGCC
ATGGGAGCCA TCGAGGTCAA AGCCCAAGGC CAAATCCGCC AAAACTGCCG CAAAGTGAAC CCGTGGTGAA AAAAAGAACG GAATCCTTCT GGGGCTTAAA GACACGGCAA CGATAAGGAC
GATCTTGTAC TGCTCGAATC TCTCCCATGT CCAGAGCCAT GTGCGACTCG CGGCCCAGAA GCCCTCGAAT GTCGCCCTCG ATCGACTCGT TCCTCATTTG TACCTTTTCG GTTAAATTAT
AGACCTTGTT TAGCACAATT TTTGTCAGCT TTCTCACAAC TTAGTAGGGA CCATTTGCAT GTTGGTTCAT ATTTCTGCTC CGTTTCACAT CCAGAATTAG TATGGTGTAG GAGATGTGGA
AATACTCTCT ACCATTTTCT ATGTCCATGT TATGTTATGC TGCTAAAAAA TTGACGCAAT ATTTATAAAA GACTGCTATG AGCATTAACT TTCAA
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Retrieve as FASTA
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